RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 RCAN3Q9UKA8 241 aa15.76■□□□□ 0.11
GGPS1-203ENST00000391855 TRPM7Q96QT4 1865 aa15.75■□□□□ 0.11
GGPS1-203ENST00000391855 FGFR2P21802 821 aa15.75■□□□□ 0.11
GGPS1-203ENST00000391855 GYG1P46976 350 aa15.75■□□□□ 0.11
GGPS1-203ENST00000391855 HTRA3P83110 453 aa15.75■□□□□ 0.11
GGPS1-203ENST00000391855 FBXO33Q7Z6M2 555 aa15.75■□□□□ 0.11
GGPS1-203ENST00000391855 PITPNM2Q9BZ72 1349 aa15.75■□□□□ 0.11
GGPS1-203ENST00000391855 ARAP2Q8WZ64 1704 aa15.74■□□□□ 0.11
GGPS1-203ENST00000391855 EGFRP00533 1210 aa15.74■□□□□ 0.11
GGPS1-203ENST00000391855 GLIS2Q9BZE0 524 aaPredicted RBP15.74■□□□□ 0.11
GGPS1-203ENST00000391855 SIL1Q9H173 461 aa15.74■□□□□ 0.11
GGPS1-203ENST00000391855 GGA3Q9NZ52 723 aa15.74■□□□□ 0.11
GGPS1-203ENST00000391855 RLBP1P12271 317 aa15.73■□□□□ 0.11
GGPS1-203ENST00000391855 ATP2B3Q16720 1220 aa15.73■□□□□ 0.11
GGPS1-203ENST00000391855 KRT26Q7Z3Y9 468 aa15.73■□□□□ 0.11
GGPS1-203ENST00000391855 KIAA0825Q8IV33 1275 aa15.73■□□□□ 0.11
GGPS1-203ENST00000391855 SULF1Q8IWU6 871 aa15.73■□□□□ 0.11
GGPS1-203ENST00000391855 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.73■□□□□ 0.11
GGPS1-203ENST00000391855 TBC1D22AQ8WUA7 517 aa15.73■□□□□ 0.11
GGPS1-203ENST00000391855 MXD3Q9BW11 206 aa15.73■□□□□ 0.11
GGPS1-203ENST00000391855 CNTNAP1P78357 1384 aa15.72■□□□□ 0.11
GGPS1-203ENST00000391855 SCARF1Q14162 830 aa15.72■□□□□ 0.11
GGPS1-203ENST00000391855 JMYQ8N9B5 988 aa15.72■□□□□ 0.11
GGPS1-203ENST00000391855 CHMP4BQ9H444 224 aaKnown RBP15.72■□□□□ 0.11
GGPS1-203ENST00000391855 PA2G4Q9UQ80 394 aaKnown RBP15.72■□□□□ 0.11
GGPS1-203ENST00000391855 RASSF10A6NK89 507 aa15.71■□□□□ 0.11
GGPS1-203ENST00000391855 TRAF5O00463 557 aa15.71■□□□□ 0.11
GGPS1-203ENST00000391855 ZBTB7BO15156 539 aaPredicted RBP15.71■□□□□ 0.11
GGPS1-203ENST00000391855 FRAT2O75474 233 aaPredicted RBP15.71■□□□□ 0.11
GGPS1-203ENST00000391855 MFSD14BQ5SR56 506 aa15.71■□□□□ 0.11
GGPS1-203ENST00000391855 CERS5Q8N5B7 392 aa15.71■□□□□ 0.11
GGPS1-203ENST00000391855 MTMR14Q8NCE2 650 aa15.71■□□□□ 0.11
GGPS1-203ENST00000391855 AKAP2Q9Y2D5 859 aa15.71■□□□□ 0.11
GGPS1-203ENST00000391855 WNT10BO00744 389 aa15.7■□□□□ 0.1
GGPS1-203ENST00000391855 CELF2O95319 508 aaKnown RBP15.7■□□□□ 0.1
GGPS1-203ENST00000391855 ANGEL2Q5VTE6 544 aaKnown RBP15.7■□□□□ 0.1
GGPS1-203ENST00000391855 USP48Q86UV5 1035 aa15.7■□□□□ 0.1
GGPS1-203ENST00000391855 GNL3LQ9NVN8 582 aaKnown RBP15.7■□□□□ 0.1
GGPS1-203ENST00000391855 ABT1Q9ULW3 272 aaKnown RBP15.7■□□□□ 0.1
GGPS1-203ENST00000391855 DDX19BQ9UMR2 479 aa15.7■□□□□ 0.1
GGPS1-203ENST00000391855 PNMA6EA0A0J9YXQ4 647 aa15.69■□□□□ 0.1
GGPS1-203ENST00000391855 ATP8B2P98198 1209 aa15.69■□□□□ 0.1
GGPS1-203ENST00000391855 G3BP1Q13283 466 aaKnown RBP eCLIP15.69■□□□□ 0.1
GGPS1-203ENST00000391855 MVPQ14764 893 aaKnown RBP15.69■□□□□ 0.1
GGPS1-203ENST00000391855 DLGAP5Q15398 846 aa15.69■□□□□ 0.1
GGPS1-203ENST00000391855 PANK1Q8TE04 598 aa15.69■□□□□ 0.1
GGPS1-203ENST00000391855 SSH3Q8TE77 659 aa15.69■□□□□ 0.1
GGPS1-203ENST00000391855 ZBED3Q96IU2 234 aaPredicted RBP15.69■□□□□ 0.1
GGPS1-203ENST00000391855 SUGT1Q9Y2Z0 365 aa15.69■□□□□ 0.1
GGPS1-203ENST00000391855 COL1A1P02452 1464 aaPredicted RBP15.69■□□□□ 0.1
GGPS1-203ENST00000391855 SEMA3EO15041 775 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 BCAMP50895 628 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 POLA2Q14181 598 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 DEFB115Q30KQ5 88 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 CST9Q5W186 159 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 APOBEC3FQ8IUX4 373 aaKnown RBP15.68■□□□□ 0.1
GGPS1-203ENST00000391855 HHIPL1Q96JK4 782 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 MKRN1Q9UHC7 482 aaKnown RBP15.68■□□□□ 0.1
GGPS1-203ENST00000391855 TLL2Q9Y6L7 1015 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 MAST3O60307 1309 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 ADM5C9JUS6 153 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 MYO1BO43795 1136 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 ECE1P42892 770 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 FMR1Q06787 632 aaKnown RBP eCLIP15.68■□□□□ 0.1
GGPS1-203ENST00000391855 CHAF1AQ13111 956 aaPredicted RBP15.68■□□□□ 0.1
GGPS1-203ENST00000391855 PDE3AQ14432 1141 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 NBPF9Q3BBW0 867 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 WDR66Q8TBY9 1149 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 SERPINA10Q9UK55 444 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 JAG2Q9Y219 1238 aa15.68■□□□□ 0.1
GGPS1-203ENST00000391855 MYH13Q9UKX3 1938 aa15.67■□□□□ 0.1
GGPS1-203ENST00000391855 ECM29Q5VYK3 1845 aa15.67■□□□□ 0.1
GGPS1-203ENST00000391855 ASTN2O75129 1339 aaPredicted RBP15.67■□□□□ 0.1
GGPS1-203ENST00000391855 F8W031 263 aaPredicted RBP15.67■□□□□ 0.1
GGPS1-203ENST00000391855 HDLBPQ00341 1268 aaKnown RBP15.67■□□□□ 0.1
GGPS1-203ENST00000391855 CFAP100Q494V2 611 aa15.67■□□□□ 0.1
GGPS1-203ENST00000391855 C1orf115Q9H7X2 142 aa15.67■□□□□ 0.1
GGPS1-203ENST00000391855 ZNF408Q9H9D4 720 aa15.67■□□□□ 0.1
GGPS1-203ENST00000391855 TTF2Q9UNY4 1162 aaKnown RBP15.67■□□□□ 0.1
GGPS1-203ENST00000391855 IQSEC3Q9UPP2 1182 aaPredicted RBP15.67■□□□□ 0.1
GGPS1-203ENST00000391855 A0A1B0GUL7 405 aa15.66■□□□□ 0.1
GGPS1-203ENST00000391855 SPDYE2BA6NHP3 402 aa15.66■□□□□ 0.1
GGPS1-203ENST00000391855 SPDYE6P0CI01 402 aa15.66■□□□□ 0.1
GGPS1-203ENST00000391855 TFCP2Q12800 502 aa15.66■□□□□ 0.1
GGPS1-203ENST00000391855 CDCA5Q96FF9 252 aa15.66■□□□□ 0.1
GGPS1-203ENST00000391855 GBA2Q9HCG7 927 aaPredicted RBP15.66■□□□□ 0.1
GGPS1-203ENST00000391855 GPR108Q9NPR9 543 aa15.66■□□□□ 0.1
GGPS1-203ENST00000391855 DENND2AQ9ULE3 1009 aa15.66■□□□□ 0.1
GGPS1-203ENST00000391855 POLR2AP24928 1970 aaKnown RBP15.65■□□□□ 0.1
GGPS1-203ENST00000391855 PDS5AQ29RF7 1337 aaKnown RBP15.65■□□□□ 0.1
GGPS1-203ENST00000391855 FKBP1BP68106 108 aa15.65■□□□□ 0.1
GGPS1-203ENST00000391855 OS9Q13438 667 aaPredicted RBP15.65■□□□□ 0.1
GGPS1-203ENST00000391855 CEP85Q6P2H3 762 aa15.65■□□□□ 0.1
GGPS1-203ENST00000391855 SAPCD2Q86UD0 394 aa15.65■□□□□ 0.1
GGPS1-203ENST00000391855 C2orf69Q8N8R5 385 aa15.65■□□□□ 0.1
GGPS1-203ENST00000391855 NOP58Q9Y2X3 529 aaKnown RBP15.65■□□□□ 0.1
GGPS1-203ENST00000391855 PPP2R3BQ9Y5P8 575 aa15.65■□□□□ 0.1
GGPS1-203ENST00000391855 THSD7BQ9C0I4 1608 aa15.64■□□□□ 0.09
GGPS1-203ENST00000391855 SURF6O75683 361 aaKnown RBP15.64■□□□□ 0.09
GGPS1-203ENST00000391855 NF2P35240 595 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 358.9 ms