RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 IKBKEQ14164 716 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 SETDB1Q15047 1291 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 SPRED3Q2MJR0 410 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 NXPE4Q6UWF7 544 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 VN1R5Q7Z5H4 357 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 FBXO33Q7Z6M2 555 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 GLIS3Q8NEA6 775 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 SLC7A3Q8WY07 619 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 WNT8BQ93098 351 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 FRMD6Q96NE9 622 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 DUSP9Q99956 384 aaKnown RBP5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 CARD10Q9BWT7 1032 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 ITPKAP23677 461 aa5.38□□□□□ -1.55
RNU6-550P-201ENST00000391057 GNA15P30679 374 aa5.38□□□□□ -1.55
RNU6-550P-201ENST00000391057 FCGRTP55899 365 aa5.38□□□□□ -1.55
RNU6-550P-201ENST00000391057 PTPN12Q05209 780 aaKnown RBP5.38□□□□□ -1.55
RNU6-550P-201ENST00000391057 PCDH1Q08174 1060 aa5.38□□□□□ -1.55
RNU6-550P-201ENST00000391057 GRIK4Q16099 956 aa5.38□□□□□ -1.55
RNU6-550P-201ENST00000391057 DTHD1Q6ZMT9 781 aa5.38□□□□□ -1.55
RNU6-550P-201ENST00000391057 KLHL23Q8NBE8 558 aa5.38□□□□□ -1.55
RNU6-550P-201ENST00000391057 BCL2L13Q9BXK5 485 aa5.38□□□□□ -1.55
RNU6-550P-201ENST00000391057 SRCIN1Q9C0H9 1055 aa5.38□□□□□ -1.55
RNU6-550P-201ENST00000391057 CLEC4MQ9H2X3 399 aaPredicted RBP5.38□□□□□ -1.55
RNU6-550P-201ENST00000391057 ZNF576Q9H609 170 aa5.38□□□□□ -1.55
RNU6-550P-201ENST00000391057 OSGEPQ9NPF4 335 aa5.38□□□□□ -1.55
RNU6-550P-201ENST00000391057 SEC31BQ9NQW1 1179 aa5.38□□□□□ -1.55
RNU6-550P-201ENST00000391057 KRBA1A5PL33 1030 aa5.37□□□□□ -1.55
RNU6-550P-201ENST00000391057 ESRRAP11474 423 aaPredicted RBP5.37□□□□□ -1.55
RNU6-550P-201ENST00000391057 XRCC5P13010 732 aaKnown RBP5.37□□□□□ -1.55
RNU6-550P-201ENST00000391057 EIF4BP23588 611 aaKnown RBP5.37□□□□□ -1.55
RNU6-550P-201ENST00000391057 GSTT1P30711 240 aa5.37□□□□□ -1.55
RNU6-550P-201ENST00000391057 XPCQ01831 940 aaPredicted RBP5.37□□□□□ -1.55
RNU6-550P-201ENST00000391057 C19orf57Q0VDD7 668 aa5.37□□□□□ -1.55
RNU6-550P-201ENST00000391057 OSBPL7Q9BZF2 842 aa5.37□□□□□ -1.55
RNU6-550P-201ENST00000391057 C12orf49Q9H741 205 aa5.37□□□□□ -1.55
RNU6-550P-201ENST00000391057 ZFYVE1Q9HBF4 777 aa5.37□□□□□ -1.55
RNU6-550P-201ENST00000391057 USP21Q9UK80 565 aa5.37□□□□□ -1.55
RNU6-550P-201ENST00000391057 CCDC9Q9Y3X0 531 aaKnown RBP5.37□□□□□ -1.55
RNU6-550P-201ENST00000391057 C9orf172C9J069 976 aa5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 DLL1O00548 723 aa5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 SOX1O00570 391 aaPredicted RBP5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 USP17L7P0C7H9 530 aa5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 CD68P34810 354 aaPredicted RBP5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 PSMD2Q13200 908 aa5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 SUZ12Q15022 739 aaKnown RBP5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 FOXD4L6Q3SYB3 417 aaPredicted RBP5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 RPS26P11Q5JNZ5 115 aaPredicted RBP5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 IGF2-ASQ6U949 168 aa5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 SHISA2Q6UWI4 295 aa5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 FOXD4L3Q6VB84 417 aaPredicted RBP5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 GALNT11Q8NCW6 608 aa5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 DDX54Q8TDD1 881 aaKnown RBP5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 GIPC2Q8TF65 315 aa5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 BCL11AQ9H165 835 aa5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 SOX17Q9H6I2 414 aaPredicted RBP5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 FAM8A1Q9UBU6 413 aa5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 PARP2Q9UGN5 583 aa5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 AKAP2Q9Y2D5 859 aa5.36□□□□□ -1.55
RNU6-550P-201ENST00000391057 EIF4EBP3O60516 100 aaPredicted RBP5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 B3GALT4O96024 378 aa5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 SELPP16109 830 aa5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 NLRP12P59046 1061 aa5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 DAB2P98082 770 aa5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 TAGLNQ01995 201 aaKnown RBP5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 NRG1Q02297 640 aaPredicted RBP5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 GSTM4Q03013 218 aa5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 ZNF423Q2M1K9 1284 aa5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 ZNF326Q5BKZ1 582 aaKnown RBP5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 HGSNATQ68CP4 663 aa5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 LENG1Q96BZ8 264 aaPredicted RBP5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 KLHDC7BQ96G42 594 aa5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 MRPL18Q9H0U6 180 aaKnown RBP5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 RNF19AQ9NV58 838 aa5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 GPN3Q9UHW5 284 aaPredicted RBP5.35□□□□□ -1.55
RNU6-550P-201ENST00000391057 C1QTNF9BB2RNN3 333 aa5.34□□□□□ -1.55
RNU6-550P-201ENST00000391057 ITGAEP38570 1179 aa5.34□□□□□ -1.55
RNU6-550P-201ENST00000391057 CHRNA4P43681 627 aa5.34□□□□□ -1.55
RNU6-550P-201ENST00000391057 PLA2G4EQ3MJ16 856 aa5.34□□□□□ -1.55
RNU6-550P-201ENST00000391057 C3orf58Q8NDZ4 430 aa5.34□□□□□ -1.55
RNU6-550P-201ENST00000391057 UBASH3BQ8TF42 649 aa5.34□□□□□ -1.55
RNU6-550P-201ENST00000391057 MRS2Q9HD23 443 aa5.34□□□□□ -1.55
RNU6-550P-201ENST00000391057 AK5Q9Y6K8 562 aa5.34□□□□□ -1.55
RNU6-550P-201ENST00000391057 TM4SF5O14894 197 aa5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 DDX3YO15523 660 aaKnown RBP5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 ADAM11O75078 769 aa5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 PPP2R3AQ06190 1150 aa5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 FAAP100Q0VG06 881 aa5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 ADGRE1Q14246 886 aa5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 DUOXA2Q1HG44 320 aa5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 ACAD11Q709F0 780 aa5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 TMC4Q7Z404 712 aa5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 CD163Q86VB7 1156 aa5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 FOXD4L4Q8WXT5 416 aaPredicted RBP5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 FAM161BQ96MY7 647 aa5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 USP26Q9BXU7 913 aa5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 KCNK4Q9NYG8 393 aa5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 PODXL2Q9NZ53 605 aa5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 PPM1HQ9ULR3 514 aa5.33□□□□□ -1.56
RNU6-550P-201ENST00000391057 F8W735 103 aaPredicted RBP5.32□□□□□ -1.56
RNU6-550P-201ENST00000391057 SORBS3O60504 671 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms