RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 TTC39BQ5VTQ0 682 aaPredicted RBP4.1□□□□□ -1.75
SNORA40.19-201ENST00000390846 CDPF1Q6NVV7 123 aa4.1□□□□□ -1.75
SNORA40.19-201ENST00000390846 SEZ6L2Q6UXD5 910 aa4.1□□□□□ -1.75
SNORA40.19-201ENST00000390846 BEND4Q6ZU67 534 aa4.1□□□□□ -1.75
SNORA40.19-201ENST00000390846 HELQQ8TDG4 1101 aa4.1□□□□□ -1.75
SNORA40.19-201ENST00000390846 SUGCTQ9HAC7 445 aa4.1□□□□□ -1.75
SNORA40.19-201ENST00000390846 ARID1BQ8NFD5 2236 aaPredicted RBP4.1□□□□□ -1.75
SNORA40.19-201ENST00000390846 CARNS1A5YM72 827 aa4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 GSC2O15499 205 aa4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 IGHA2P01877 340 aa4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 PRNPP04156 253 aa4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 DRD2P14416 443 aa4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 PTPRAP18433 802 aa4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 ATP2B4P23634 1241 aa4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 MPSTP25325 297 aa4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 SSFA2P28290 1259 aa4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 EIF1AXP47813 144 aaKnown RBP4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 NLRP12P59046 1061 aa4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 C14orf37Q86TY3 774 aa4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 C2CD4AQ8NCU7 369 aaPredicted RBP4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 SMG8Q8ND04 991 aaKnown RBP4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 EZH1Q92800 747 aaPredicted RBP4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 CEP41Q9BYV8 373 aa4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 BHLHE41Q9C0J9 482 aaPredicted RBP4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 RBSNQ9H1K0 784 aa4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 FOXD3Q9UJU5 478 aaPredicted RBP4.09□□□□□ -1.75
SNORA40.19-201ENST00000390846 METTL12A8MUP2 240 aa4.08□□□□□ -1.76
SNORA40.19-201ENST00000390846 TNFRSF21O75509 655 aa4.08□□□□□ -1.76
SNORA40.19-201ENST00000390846 ECEL1O95672 775 aa4.08□□□□□ -1.76
SNORA40.19-201ENST00000390846 ESRRAP11474 423 aaPredicted RBP4.08□□□□□ -1.76
SNORA40.19-201ENST00000390846 ZNF423Q2M1K9 1284 aa4.08□□□□□ -1.76
SNORA40.19-201ENST00000390846 ANKRD34AQ69YU3 496 aa4.08□□□□□ -1.76
SNORA40.19-201ENST00000390846 ZNF438Q7Z4V0 828 aa4.08□□□□□ -1.76
SNORA40.19-201ENST00000390846 NCAPG2Q86XI2 1143 aa4.08□□□□□ -1.76
SNORA40.19-201ENST00000390846 ABI1Q8IZP0 508 aa4.08□□□□□ -1.76
SNORA40.19-201ENST00000390846 PBXIP1Q96AQ6 731 aa4.08□□□□□ -1.76
SNORA40.19-201ENST00000390846 MFSD14AQ96MC6 490 aa4.08□□□□□ -1.76
SNORA40.19-201ENST00000390846 GSX1Q9H4S2 264 aaPredicted RBP4.08□□□□□ -1.76
SNORA40.19-201ENST00000390846 C1orf115Q9H7X2 142 aa4.08□□□□□ -1.76
SNORA40.19-201ENST00000390846 POLIQ9UNA4 740 aa4.08□□□□□ -1.76
SNORA40.19-201ENST00000390846 FNDC3AQ9Y2H6 1198 aaKnown RBP4.08□□□□□ -1.76
SNORA40.19-201ENST00000390846 BTBD11A6QL63 1104 aa4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 WDR64B1ANS9 1081 aa4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 MAP4P27816 1152 aaKnown RBP4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 MZF1P28698 734 aaPredicted RBP4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 INTS5Q6P9B9 1019 aaKnown RBP4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 GJD3Q8N144 294 aa4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 ABTB2Q8N961 1025 aa4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 GTF3C2Q8WUA4 911 aaPredicted RBP4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 TCF12Q99081 682 aa4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 OSMRQ99650 979 aa4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 TRIM56Q9BRZ2 755 aaKnown RBP4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 RUSC1Q9BVN2 902 aa4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 RNF208Q9H0X6 261 aa4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 FAM13BQ9NYF5 915 aa4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 CCDC39Q9UFE4 941 aa4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 U3KQE9 123 aa4.07□□□□□ -1.76
SNORA40.19-201ENST00000390846 ITGB5P18084 799 aa4.06□□□□□ -1.76
SNORA40.19-201ENST00000390846 CES1P23141 567 aa4.06□□□□□ -1.76
SNORA40.19-201ENST00000390846 GRIA4P48058 902 aa4.06□□□□□ -1.76
SNORA40.19-201ENST00000390846 IRAK1P51617 712 aa4.06□□□□□ -1.76
SNORA40.19-201ENST00000390846 DNM1Q05193 864 aaKnown RBP4.06□□□□□ -1.76
SNORA40.19-201ENST00000390846 C19orf57Q0VDD7 668 aa4.06□□□□□ -1.76
SNORA40.19-201ENST00000390846 DCAF11Q8TEB1 546 aa4.06□□□□□ -1.76
SNORA40.19-201ENST00000390846 BSNDQ8WZ55 320 aa4.06□□□□□ -1.76
SNORA40.19-201ENST00000390846 SPACA7Q96KW9 195 aa4.06□□□□□ -1.76
SNORA40.19-201ENST00000390846 SOX17Q9H6I2 414 aaPredicted RBP4.06□□□□□ -1.76
SNORA40.19-201ENST00000390846 CCDC87Q9NVE4 849 aa4.06□□□□□ -1.76
SNORA40.19-201ENST00000390846 HIF3AQ9Y2N7 669 aa4.06□□□□□ -1.76
SNORA40.19-201ENST00000390846 DYNC1LI2O43237 492 aaPredicted RBP4.05□□□□□ -1.76
SNORA40.19-201ENST00000390846 NOM1Q5C9Z4 860 aaKnown RBP4.05□□□□□ -1.76
SNORA40.19-201ENST00000390846 SLC7A3Q8WY07 619 aa4.05□□□□□ -1.76
SNORA40.19-201ENST00000390846 ZFYVE28Q9HCC9 887 aa4.05□□□□□ -1.76
SNORA40.19-201ENST00000390846 C1GALT1Q9NS00 363 aa4.05□□□□□ -1.76
SNORA40.19-201ENST00000390846 PIM2Q9P1W9 311 aa4.05□□□□□ -1.76
SNORA40.19-201ENST00000390846 PRKAG2Q9UGJ0 569 aa4.05□□□□□ -1.76
SNORA40.19-201ENST00000390846 A0A1W2PP55 124 aa4.04□□□□□ -1.76
SNORA40.19-201ENST00000390846 FAM170BA6NMN3 283 aa4.04□□□□□ -1.76
SNORA40.19-201ENST00000390846 WNT11O96014 354 aa4.04□□□□□ -1.76
SNORA40.19-201ENST00000390846 FOSL1P15407 271 aa4.04□□□□□ -1.76
SNORA40.19-201ENST00000390846 SPRED3Q2MJR0 410 aa4.04□□□□□ -1.76
SNORA40.19-201ENST00000390846 USPL1Q5W0Q7 1092 aa4.04□□□□□ -1.76
SNORA40.19-201ENST00000390846 CCNJLQ8IV13 435 aa4.04□□□□□ -1.76
SNORA40.19-201ENST00000390846 FBLIM1Q8WUP2 373 aa4.04□□□□□ -1.76
SNORA40.19-201ENST00000390846 PODXL2Q9NZ53 605 aa4.04□□□□□ -1.76
SNORA40.19-201ENST00000390846 RBAK-RBAKDNI3L0D1 243 aa4.03□□□□□ -1.76
SNORA40.19-201ENST00000390846 PAX4O43316 350 aa4.03□□□□□ -1.76
SNORA40.19-201ENST00000390846 POLR3DP05423 398 aaPredicted RBP4.03□□□□□ -1.76
SNORA40.19-201ENST00000390846 SOX4Q06945 474 aaPredicted RBP4.03□□□□□ -1.76
SNORA40.19-201ENST00000390846 EXOSC6Q5RKV6 272 aaKnown RBP4.03□□□□□ -1.76
SNORA40.19-201ENST00000390846 ZAR1Q86SH2 424 aa4.03□□□□□ -1.76
SNORA40.19-201ENST00000390846 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
SNORA40.19-201ENST00000390846 ACSS3Q9H6R3 686 aa4.03□□□□□ -1.76
SNORA40.19-201ENST00000390846 PAK6Q9NQU5 681 aaPredicted RBP4.03□□□□□ -1.76
SNORA40.19-201ENST00000390846 RNF114Q9Y508 228 aa4.03□□□□□ -1.76
SNORA40.19-201ENST00000390846 ACTL7BQ9Y614 415 aa4.03□□□□□ -1.76
SNORA40.19-201ENST00000390846 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.03□□□□□ -1.76
SNORA40.19-201ENST00000390846 CARMIL2Q6F5E8 1435 aa4.03□□□□□ -1.76
SNORA40.19-201ENST00000390846 ARID3CA6NKF2 412 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms