RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 NEUROD6Q96NK8 337 aa18.54■□□□□ 0.56
IGHV3-53-201ENST00000390627 MXD3Q9BW11 206 aa18.54■□□□□ 0.56
IGHV3-53-201ENST00000390627 CLEC11AQ9Y240 323 aa18.54■□□□□ 0.56
IGHV3-53-201ENST00000390627 SHTN1A0MZ66 631 aa18.53■□□□□ 0.56
IGHV3-53-201ENST00000390627 POTEIP0CG38 1075 aa18.53■□□□□ 0.56
IGHV3-53-201ENST00000390627 POTEJP0CG39 1038 aa18.53■□□□□ 0.56
IGHV3-53-201ENST00000390627 ADORA1P30542 326 aa18.53■□□□□ 0.56
IGHV3-53-201ENST00000390627 ZNF280AP59817 542 aaPredicted RBP18.53■□□□□ 0.56
IGHV3-53-201ENST00000390627 AAMPQ13685 434 aa18.53■□□□□ 0.56
IGHV3-53-201ENST00000390627 TNNI3KQ59H18 835 aa18.53■□□□□ 0.56
IGHV3-53-201ENST00000390627 CHADLQ6NUI6 762 aa18.53■□□□□ 0.56
IGHV3-53-201ENST00000390627 XAGE2Q96GT9 111 aa18.53■□□□□ 0.56
IGHV3-53-201ENST00000390627 HDAC9Q9UKV0 1011 aa18.53■□□□□ 0.56
IGHV3-53-201ENST00000390627 IQSEC3Q9UPP2 1182 aaPredicted RBP18.53■□□□□ 0.56
IGHV3-53-201ENST00000390627 JAG2Q9Y219 1238 aa18.53■□□□□ 0.56
IGHV3-53-201ENST00000390627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.53■□□□□ 0.56
IGHV3-53-201ENST00000390627 FPGT-TNNI3KV9GXZ4 949 aa18.53■□□□□ 0.56
IGHV3-53-201ENST00000390627 ADAMTSL1Q8N6G6 1762 aa18.53■□□□□ 0.56
IGHV3-53-201ENST00000390627 SEMA3EO15041 775 aa18.52■□□□□ 0.56
IGHV3-53-201ENST00000390627 RAB11FIP3O75154 756 aa18.52■□□□□ 0.56
IGHV3-53-201ENST00000390627 CHAF1AQ13111 956 aaPredicted RBP18.52■□□□□ 0.56
IGHV3-53-201ENST00000390627 MFSD14BQ5SR56 506 aa18.52■□□□□ 0.56
IGHV3-53-201ENST00000390627 GORABQ5T7V8 394 aa18.52■□□□□ 0.56
IGHV3-53-201ENST00000390627 CCDC102BQ68D86 513 aa18.52■□□□□ 0.56
IGHV3-53-201ENST00000390627 TRPM4Q8TD43 1214 aa18.52■□□□□ 0.56
IGHV3-53-201ENST00000390627 TBC1D22AQ8WUA7 517 aa18.52■□□□□ 0.56
IGHV3-53-201ENST00000390627 ZBTB22O15209 634 aa18.51■□□□□ 0.55
IGHV3-53-201ENST00000390627 PHKA1P46020 1223 aa18.51■□□□□ 0.55
IGHV3-53-201ENST00000390627 KIF4BQ2VIQ3 1234 aa18.51■□□□□ 0.55
IGHV3-53-201ENST00000390627 TBC1D10BQ4KMP7 808 aaPredicted RBP18.51■□□□□ 0.55
IGHV3-53-201ENST00000390627 SAMD7Q7Z3H4 446 aa18.51■□□□□ 0.55
IGHV3-53-201ENST00000390627 KIAA0825Q8IV33 1275 aa18.51■□□□□ 0.55
IGHV3-53-201ENST00000390627 CERS5Q8N5B7 392 aa18.51■□□□□ 0.55
IGHV3-53-201ENST00000390627 KIF1BPQ96EK5 621 aa18.51■□□□□ 0.55
IGHV3-53-201ENST00000390627 RHPN1Q8TCX5 695 aa18.5■□□□□ 0.55
IGHV3-53-201ENST00000390627 ZC3H15Q8WU90 426 aaKnown RBP18.5■□□□□ 0.55
IGHV3-53-201ENST00000390627 MYOZ2Q9NPC6 264 aa18.5■□□□□ 0.55
IGHV3-53-201ENST00000390627 DENND2AQ9ULE3 1009 aa18.5■□□□□ 0.55
IGHV3-53-201ENST00000390627 MYH13Q9UKX3 1938 aa18.5■□□□□ 0.55
IGHV3-53-201ENST00000390627 RBM26Q5T8P6 1007 aaKnown RBP18.49■□□□□ 0.55
IGHV3-53-201ENST00000390627 WDR66Q8TBY9 1149 aa18.49■□□□□ 0.55
IGHV3-53-201ENST00000390627 PCDHB15Q9Y5E8 787 aa18.49■□□□□ 0.55
IGHV3-53-201ENST00000390627 COL1A1P02452 1464 aaPredicted RBP18.48■□□□□ 0.55
IGHV3-53-201ENST00000390627 HIRAP54198 1017 aaPredicted RBP18.48■□□□□ 0.55
IGHV3-53-201ENST00000390627 CLASRPQ8N2M8 674 aaKnown RBP18.48■□□□□ 0.55
IGHV3-53-201ENST00000390627 SUGT1Q9Y2Z0 365 aa18.48■□□□□ 0.55
IGHV3-53-201ENST00000390627 PDS5AQ29RF7 1337 aaKnown RBP18.48■□□□□ 0.55
IGHV3-53-201ENST00000390627 F8W031 263 aaPredicted RBP18.47■□□□□ 0.55
IGHV3-53-201ENST00000390627 APBB1O00213 710 aa18.47■□□□□ 0.55
IGHV3-53-201ENST00000390627 EGFRP00533 1210 aa18.47■□□□□ 0.55
IGHV3-53-201ENST00000390627 UQCRFS1P1P0C7P4 283 aa18.47■□□□□ 0.55
IGHV3-53-201ENST00000390627 CCDC158Q5M9N0 1113 aa18.47■□□□□ 0.55
IGHV3-53-201ENST00000390627 MAP1SQ66K74 1059 aaPredicted RBP18.47■□□□□ 0.55
IGHV3-53-201ENST00000390627 DBNDD2Q9BQY9 259 aa18.47■□□□□ 0.55
IGHV3-53-201ENST00000390627 MAST3O60307 1309 aa18.47■□□□□ 0.55
IGHV3-53-201ENST00000390627 ARID4AP29374 1257 aaPredicted RBP18.46■□□□□ 0.55
IGHV3-53-201ENST00000390627 RASGRF1Q13972 1273 aa18.46■□□□□ 0.55
IGHV3-53-201ENST00000390627 TTC39AQ5SRH9 613 aa18.46■□□□□ 0.55
IGHV3-53-201ENST00000390627 AACSQ86V21 672 aa18.46■□□□□ 0.55
IGHV3-53-201ENST00000390627 CNTROBQ8N137 903 aa18.46■□□□□ 0.55
IGHV3-53-201ENST00000390627 ZGPATQ8N5A5 531 aaKnown RBP18.46■□□□□ 0.55
IGHV3-53-201ENST00000390627 EAF2Q96CJ1 260 aaPredicted RBP18.46■□□□□ 0.55
IGHV3-53-201ENST00000390627 IL1RAPL2Q9NP60 686 aa18.46■□□□□ 0.55
IGHV3-53-201ENST00000390627 PGAP2Q9UHJ9 254 aa18.46■□□□□ 0.55
IGHV3-53-201ENST00000390627 TTF2Q9UNY4 1162 aaKnown RBP18.46■□□□□ 0.55
IGHV3-53-201ENST00000390627 SALL1Q9NSC2 1324 aa18.46■□□□□ 0.55
IGHV3-53-201ENST00000390627 EXOC6Q8TAG9 804 aa18.45■□□□□ 0.54
IGHV3-53-201ENST00000390627 LRRCC1Q9C099 1032 aa18.45■□□□□ 0.54
IGHV3-53-201ENST00000390627 CCDC8Q9H0W5 538 aaPredicted RBP18.45■□□□□ 0.54
IGHV3-53-201ENST00000390627 DCTPP1Q9H773 170 aa18.45■□□□□ 0.54
IGHV3-53-201ENST00000390627 DBNLQ9UJU6 430 aaKnown RBP18.45■□□□□ 0.54
IGHV3-53-201ENST00000390627 HSPA6P17066 643 aa18.44■□□□□ 0.54
IGHV3-53-201ENST00000390627 SCARF1Q14162 830 aa18.44■□□□□ 0.54
IGHV3-53-201ENST00000390627 DLGAP5Q15398 846 aa18.44■□□□□ 0.54
IGHV3-53-201ENST00000390627 MTMR14Q8NCE2 650 aa18.44■□□□□ 0.54
IGHV3-53-201ENST00000390627 DCPSQ96C86 337 aaKnown RBP18.44■□□□□ 0.54
IGHV3-53-201ENST00000390627 GGA3Q9NZ52 723 aa18.44■□□□□ 0.54
IGHV3-53-201ENST00000390627 SERPINA10Q9UK55 444 aa18.44■□□□□ 0.54
IGHV3-53-201ENST00000390627 WNT10BO00744 389 aa18.43■□□□□ 0.54
IGHV3-53-201ENST00000390627 IFIT2P09913 472 aaKnown RBP18.43■□□□□ 0.54
IGHV3-53-201ENST00000390627 CFAP100Q494V2 611 aa18.43■□□□□ 0.54
IGHV3-53-201ENST00000390627 CDC37L1Q7L3B6 337 aa18.43■□□□□ 0.54
IGHV3-53-201ENST00000390627 SPATA5Q8NB90 893 aa18.43■□□□□ 0.54
IGHV3-53-201ENST00000390627 ZNF512BQ96KM6 892 aaPredicted RBP18.43■□□□□ 0.54
IGHV3-53-201ENST00000390627 TLR7Q9NYK1 1049 aaKnown RBP18.43■□□□□ 0.54
IGHV3-53-201ENST00000390627 PITPNM2Q9BZ72 1349 aa18.43■□□□□ 0.54
IGHV3-53-201ENST00000390627 MYO1BO43795 1136 aa18.42■□□□□ 0.54
IGHV3-53-201ENST00000390627 ITGBL1O95965 494 aaPredicted RBP18.42■□□□□ 0.54
IGHV3-53-201ENST00000390627 LDHBP07195 334 aaKnown RBP18.42■□□□□ 0.54
IGHV3-53-201ENST00000390627 RBM5P52756 815 aaKnown RBP eCLIP18.42■□□□□ 0.54
IGHV3-53-201ENST00000390627 HDLBPQ00341 1268 aaKnown RBP18.42■□□□□ 0.54
IGHV3-53-201ENST00000390627 HDAC1Q13547 482 aaPredicted RBP18.42■□□□□ 0.54
IGHV3-53-201ENST00000390627 GRIK5Q16478 980 aa18.42■□□□□ 0.54
IGHV3-53-201ENST00000390627 NBPF9Q3BBW0 867 aa18.42■□□□□ 0.54
IGHV3-53-201ENST00000390627 HMG20BQ9P0W2 317 aa18.42■□□□□ 0.54
IGHV3-53-201ENST00000390627 PASKQ96RG2 1323 aa18.42■□□□□ 0.54
IGHV3-53-201ENST00000390627 MCAMP43121 646 aa18.41■□□□□ 0.54
IGHV3-53-201ENST00000390627 CRKP46108 304 aa18.41■□□□□ 0.54
IGHV3-53-201ENST00000390627 ANGEL2Q5VTE6 544 aaKnown RBP18.41■□□□□ 0.54
IGHV3-53-201ENST00000390627 SPTY2D1Q68D10 685 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms