RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 TSPAN6O43657 245 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 DHX16O60231 1041 aaKnown RBP7.16□□□□□ -1.26
ERCC4-202ENST00000389138 WNT7BP56706 349 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 TTC30BQ8N4P2 665 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 RELTQ969Z4 430 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 PRKD2Q9BZL6 878 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 SNTG2Q9NY99 539 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 FKBPLQ9UIM3 349 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 ATAD2Q6PL18 1390 aa7.15□□□□□ -1.26
ERCC4-202ENST00000389138 CALRP27797 417 aaKnown RBP7.15□□□□□ -1.26
ERCC4-202ENST00000389138 MAN1A1P33908 653 aa7.15□□□□□ -1.26
ERCC4-202ENST00000389138 NOS2P35228 1153 aa7.15□□□□□ -1.26
ERCC4-202ENST00000389138 TRIM32Q13049 653 aa7.15□□□□□ -1.26
ERCC4-202ENST00000389138 RASA3Q14644 834 aa7.15□□□□□ -1.26
ERCC4-202ENST00000389138 ZNF654Q8IZM8 581 aa7.15□□□□□ -1.26
ERCC4-202ENST00000389138 ZNF408Q9H9D4 720 aa7.15□□□□□ -1.26
ERCC4-202ENST00000389138 KIAA1024Q9UPX6 916 aa7.15□□□□□ -1.26
ERCC4-202ENST00000389138 CTDP1Q9Y5B0 961 aaPredicted RBP7.15□□□□□ -1.26
ERCC4-202ENST00000389138 NHSL1Q5SYE7 1610 aa7.15□□□□□ -1.26
ERCC4-202ENST00000389138 MTUS2Q5JR59 1369 aa7.15□□□□□ -1.26
ERCC4-202ENST00000389138 POU3F3P20264 500 aaPredicted RBP7.15□□□□□ -1.27
ERCC4-202ENST00000389138 KCTD2Q14681 263 aa7.15□□□□□ -1.27
ERCC4-202ENST00000389138 SPRYD7Q5W111 196 aa7.15□□□□□ -1.27
ERCC4-202ENST00000389138 FTSJ3Q8IY81 847 aaKnown RBP7.15□□□□□ -1.27
ERCC4-202ENST00000389138 CKAP2LQ8IYA6 745 aa7.15□□□□□ -1.27
ERCC4-202ENST00000389138 MKL1Q969V6 931 aa7.15□□□□□ -1.27
ERCC4-202ENST00000389138 YTHDC1Q96MU7 727 aaKnown RBP7.15□□□□□ -1.27
ERCC4-202ENST00000389138 MUC3BQ9H195 1237 aa7.15□□□□□ -1.27
ERCC4-202ENST00000389138 CFDP1Q9UEE9 299 aaPredicted RBP7.15□□□□□ -1.27
ERCC4-202ENST00000389138 AFF2P51816 1311 aa7.14□□□□□ -1.27
ERCC4-202ENST00000389138 CCDC141Q6ZP82 1450 aa7.14□□□□□ -1.27
ERCC4-202ENST00000389138 CAND2O75155 1236 aa7.14□□□□□ -1.27
ERCC4-202ENST00000389138 COL6A1P12109 1028 aa7.14□□□□□ -1.27
ERCC4-202ENST00000389138 KCNA6P17658 529 aa7.14□□□□□ -1.27
ERCC4-202ENST00000389138 EHHADHQ08426 723 aa7.14□□□□□ -1.27
ERCC4-202ENST00000389138 ZNF598Q86UK7 904 aaKnown RBP7.14□□□□□ -1.27
ERCC4-202ENST00000389138 NGDNQ8NEJ9 315 aaKnown RBP7.14□□□□□ -1.27
ERCC4-202ENST00000389138 PTPRHQ9HD43 1115 aa7.14□□□□□ -1.27
ERCC4-202ENST00000389138 CYLDQ9NQC7 956 aa7.14□□□□□ -1.27
ERCC4-202ENST00000389138 MAST1Q9Y2H9 1570 aa7.14□□□□□ -1.27
ERCC4-202ENST00000389138 GPSM3Q9Y4H4 160 aa7.14□□□□□ -1.27
ERCC4-202ENST00000389138 ESYT3A0FGR9 886 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 PLIN1O60240 522 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 KRT18P05783 430 aaKnown RBP7.13□□□□□ -1.27
ERCC4-202ENST00000389138 SEC13P55735 322 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 SF3B2Q13435 895 aaKnown RBP7.13□□□□□ -1.27
ERCC4-202ENST00000389138 PDXDC2PQ6P474 469 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 ARMCX6Q7L4S7 300 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 C14orf80Q86SX3 495 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 VPS37DQ86XT2 251 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 LILRB2Q8N423 598 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 BAP1Q92560 729 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 EMID1Q96A84 441 aaPredicted RBP7.13□□□□□ -1.27
ERCC4-202ENST00000389138 PURBQ96QR8 312 aaKnown RBP7.13□□□□□ -1.27
ERCC4-202ENST00000389138 CEP89Q96ST8 783 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 ZHX3Q9H4I2 956 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 LZTS1Q9Y250 596 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 EFCAB6Q5THR3 1501 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 TIMM44O43615 452 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 ALDH1L1O75891 902 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 CDC27P30260 824 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 CHMP4BP1P59074 171 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 HDAC1Q13547 482 aaPredicted RBP7.13□□□□□ -1.27
ERCC4-202ENST00000389138 BRD3Q15059 726 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 TKFCQ3LXA3 575 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 NBPF6Q5VWK0 638 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 KANK3Q6NY19 840 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 ZNF511Q8NB15 262 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 NBPF4Q96M43 638 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 PPCSQ9HAB8 311 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 AS3MTQ9HBK9 375 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 NEUROD4Q9HD90 331 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 FRMD4BQ9Y2L6 1034 aa7.13□□□□□ -1.27
ERCC4-202ENST00000389138 TBX3O15119 743 aa7.12□□□□□ -1.27
ERCC4-202ENST00000389138 RBM6P78332 1123 aaKnown RBP7.12□□□□□ -1.27
ERCC4-202ENST00000389138 NEUROD1Q13562 356 aa7.12□□□□□ -1.27
ERCC4-202ENST00000389138 RAPGEF1Q13905 1077 aa7.12□□□□□ -1.27
ERCC4-202ENST00000389138 INO80DQ53TQ3 878 aaPredicted RBP7.12□□□□□ -1.27
ERCC4-202ENST00000389138 RSPH9Q9H1X1 276 aaPredicted RBP7.12□□□□□ -1.27
ERCC4-202ENST00000389138 SLKQ9H2G2 1235 aaPredicted RBP7.12□□□□□ -1.27
ERCC4-202ENST00000389138 MYO5BQ9ULV0 1848 aa7.12□□□□□ -1.27
ERCC4-202ENST00000389138 TMEM2Q9UHN6 1383 aa7.12□□□□□ -1.27
ERCC4-202ENST00000389138 ARHGEF5Q12774 1597 aa7.12□□□□□ -1.27
ERCC4-202ENST00000389138 SETD5Q9C0A6 1442 aa7.12□□□□□ -1.27
ERCC4-202ENST00000389138 HSP90AA1P07900 732 aaKnown RBP7.12□□□□□ -1.27
ERCC4-202ENST00000389138 PTK2Q05397 1052 aa7.12□□□□□ -1.27
ERCC4-202ENST00000389138 NR1H3Q13133 447 aa7.12□□□□□ -1.27
ERCC4-202ENST00000389138 ZRSR2Q15696 482 aaKnown RBP7.12□□□□□ -1.27
ERCC4-202ENST00000389138 PPM1EQ8WY54 764 aa7.12□□□□□ -1.27
ERCC4-202ENST00000389138 RUNDC1Q96C34 613 aa7.12□□□□□ -1.27
ERCC4-202ENST00000389138 CHMP4BQ9H444 224 aaKnown RBP7.12□□□□□ -1.27
ERCC4-202ENST00000389138 ZNF644Q9H582 1327 aaPredicted RBP7.11□□□□□ -1.27
ERCC4-202ENST00000389138 GOLGA6CA6NDK9 693 aa7.11□□□□□ -1.27
ERCC4-202ENST00000389138 GOLGA6BA6NDN3 693 aa7.11□□□□□ -1.27
ERCC4-202ENST00000389138 GOLGA6DP0CG33 693 aa7.11□□□□□ -1.27
ERCC4-202ENST00000389138 PAK2Q13177 524 aa7.11□□□□□ -1.27
ERCC4-202ENST00000389138 TTF1Q15361 905 aaPredicted RBP7.11□□□□□ -1.27
ERCC4-202ENST00000389138 LONRF1Q17RB8 773 aa7.11□□□□□ -1.27
ERCC4-202ENST00000389138 TMEM95Q3KNT9 176 aa7.11□□□□□ -1.27
ERCC4-202ENST00000389138 DALRD3Q5D0E6 543 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms