RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ZMYND15Q9H091 742 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 ELP3Q9H9T3 547 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 LRRC4CQ9HCJ2 640 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 OSGEPQ9NPF4 335 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 ABI2Q9NYB9 513 aaPredicted RBP1.4□□□□□ -2.19
SNORD28-201ENST00000384706 FAM13BQ9NYF5 915 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 KANSL3Q9P2N6 904 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 JAG2Q9Y219 1238 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 HIF3AQ9Y2N7 669 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP1.4□□□□□ -2.19
SNORD28-201ENST00000384706 FAM170BA6NMN3 283 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 PDE2AO00408 941 aaPredicted RBP1.39□□□□□ -2.19
SNORD28-201ENST00000384706 SOX1O00570 391 aaPredicted RBP1.39□□□□□ -2.19
SNORD28-201ENST00000384706 KIF4AO95239 1232 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 DLGAP3O95886 979 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 ACPPP15309 386 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 CES1P23141 567 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 ADMP35318 185 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 COL19A1Q14993 1142 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 MSMPQ1L6U9 139 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 C8orf34Q49A92 452 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 EXOSC6Q5RKV6 272 aaKnown RBP1.39□□□□□ -2.19
SNORD28-201ENST00000384706 DUSP27Q5VZP5 1158 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 CDPF1Q6NVV7 123 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 CBLL1Q75N03 491 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 ZNF438Q7Z4V0 828 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 VSIG10LQ86VR7 867 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 PROSER2Q86WR7 435 aaPredicted RBP1.39□□□□□ -2.19
SNORD28-201ENST00000384706 FNBP4Q8N3X1 1017 aaPredicted RBP1.39□□□□□ -2.19
SNORD28-201ENST00000384706 C1orf127Q8N9H9 656 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 AGBL5Q8NDL9 886 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 TTC16Q8NEE8 873 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 FLCNQ8NFG4 579 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 WNT8BQ93098 351 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 NUDT16Q96DE0 195 aaKnown RBP1.39□□□□□ -2.19
SNORD28-201ENST00000384706 HHIPQ96QV1 700 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 METTL22Q9BUU2 404 aaPredicted RBP1.39□□□□□ -2.19
SNORD28-201ENST00000384706 ADAM19Q9H013 955 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 CYP4F12Q9HCS2 524 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 BSDC1Q9NW68 430 aaPredicted RBP1.39□□□□□ -2.19
SNORD28-201ENST00000384706 TMEM63CQ9P1W3 806 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 CNTN3Q9P232 1028 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 STIM2Q9P246 746 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 NOVA2Q9UNW9 492 aaKnown RBP1.39□□□□□ -2.19
SNORD28-201ENST00000384706 NCANO14594 1321 aa1.39□□□□□ -2.19
SNORD28-201ENST00000384706 LOC100289279A0A1B0GTE1 492 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 A6NHS1 94 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 DBX1A6NMT0 343 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 NFKBIEO00221 500 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 BIN1O00499 593 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 PRRG2O14669 202 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 TNFRSF10BO14763 440 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 FARP2O94887 1054 aaPredicted RBP1.38□□□□□ -2.19
SNORD28-201ENST00000384706 TIAF1O95411 115 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 PAPLNO95428 1278 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 PRNPP04156 253 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 NFICP08651 508 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 ITGB5P18084 799 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 RAB6AP20340 208 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 GSTM4Q03013 218 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 DNM1Q05193 864 aaKnown RBP1.38□□□□□ -2.19
SNORD28-201ENST00000384706 SOX4Q06945 474 aaPredicted RBP1.38□□□□□ -2.19
SNORD28-201ENST00000384706 BNIP3Q12983 259 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 IKBKEQ14164 716 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 PLCL1Q15111 1095 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 PKN1Q16512 942 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 CPSF6Q16630 551 aaKnown RBP eCLIP1.38□□□□□ -2.19
SNORD28-201ENST00000384706 SWI5Q1ZZU3 235 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 TMEM132AQ24JP5 1023 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 ZNF792Q3KQV3 632 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 PDE12Q6L8Q7 609 aaKnown RBP1.38□□□□□ -2.19
SNORD28-201ENST00000384706 ZNF574Q6ZN55 896 aaPredicted RBP1.38□□□□□ -2.19
SNORD28-201ENST00000384706 NFXL1Q6ZNB6 911 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 ZNF765Q7L2R6 523 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 DYMQ7RTS9 669 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 SPRED2Q7Z698 418 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 ZAR1Q86SH2 424 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 ATCAYQ86WG3 371 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 KSR1Q8IVT5 923 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 SMG8Q8ND04 991 aaKnown RBP1.38□□□□□ -2.19
SNORD28-201ENST00000384706 ASAP3Q8TDY4 903 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 BSNDQ8WZ55 320 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 NXPE3Q969Y0 559 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 OSMRQ99650 979 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 YIPF2Q9BWQ6 316 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 TMPRSS13Q9BYE2 586 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 LGR6Q9HBX8 967 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 PAK6Q9NQU5 681 aaPredicted RBP1.38□□□□□ -2.19
SNORD28-201ENST00000384706 DZANK1Q9NVP4 752 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 PRKAG2Q9UGJ0 569 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 ZC3H7BQ9UGR2 993 aaKnown RBP1.38□□□□□ -2.19
SNORD28-201ENST00000384706 SALL4Q9UJQ4 1053 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 ZNF777Q9ULD5 760 aaPredicted RBP1.38□□□□□ -2.19
SNORD28-201ENST00000384706 SLC5A6Q9Y289 635 aa1.38□□□□□ -2.19
SNORD28-201ENST00000384706 ACIN1Q9UKV3 1341 aaKnown RBP1.38□□□□□ -2.19
SNORD28-201ENST00000384706 SLC24A1O60721 1099 aa1.37□□□□□ -2.19
SNORD28-201ENST00000384706 RPLP1P05386 114 aaKnown RBP1.37□□□□□ -2.19
SNORD28-201ENST00000384706 ZNF865P0CJ78 1059 aaPredicted RBP1.37□□□□□ -2.19
SNORD28-201ENST00000384706 PCSK2P16519 638 aa1.37□□□□□ -2.19
SNORD28-201ENST00000384706 CYP27A1Q02318 531 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms