RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 SASH1O94885 1247 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 KRT32Q14532 448 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 CHPF2Q9P2E5 772 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 OVOS2A0A0J9YW53 1432 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 OVOS2Q6IE36 1432 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 SPATA31D1Q6ZQQ2 1576 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 JCADQ9P266 1359 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 AKAP12Q02952 1782 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 PFKFB2O60825 505 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 SERPINC1P01008 464 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 CHGBP05060 677 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 MTX1Q13505 466 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 CFAP100Q494V2 611 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 USPL1Q5W0Q7 1092 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 NCOA5Q9HCD5 579 aaKnown RBP17.3■□□□□ 0.36
CTNS-202ENST00000381870 BRMS1Q9HCU9 246 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 FAN1Q9Y2M0 1017 aa17.3■□□□□ 0.36
CTNS-202ENST00000381870 ALDH1L1O75891 902 aa17.29■□□□□ 0.36
CTNS-202ENST00000381870 ATL3Q6DD88 541 aa17.29■□□□□ 0.36
CTNS-202ENST00000381870 TOGARAM2Q6ZUX3 1019 aa17.29■□□□□ 0.36
CTNS-202ENST00000381870 LLPHQ9BRT6 129 aaKnown RBP17.29■□□□□ 0.36
CTNS-202ENST00000381870 ABCC6O95255 1503 aa17.29■□□□□ 0.36
CTNS-202ENST00000381870 SART3Q15020 963 aaKnown RBP17.29■□□□□ 0.36
CTNS-202ENST00000381870 WWC2Q6AWC2 1192 aa17.29■□□□□ 0.36
CTNS-202ENST00000381870 CCDC129Q6ZRS4 1044 aa17.29■□□□□ 0.36
CTNS-202ENST00000381870 FCHSD1Q86WN1 690 aa17.29■□□□□ 0.36
CTNS-202ENST00000381870 VSTM4Q8IW00 320 aa17.29■□□□□ 0.36
CTNS-202ENST00000381870 SUGCTQ9HAC7 445 aa17.29■□□□□ 0.36
CTNS-202ENST00000381870 CLIC4Q9Y696 253 aa17.29■□□□□ 0.36
CTNS-202ENST00000381870 KDRP35968 1356 aa17.29■□□□□ 0.36
CTNS-202ENST00000381870 ARHGAP6O43182 974 aa17.28■□□□□ 0.36
CTNS-202ENST00000381870 CYP21A2P08686 494 aa17.28■□□□□ 0.36
CTNS-202ENST00000381870 TOP1P11387 765 aaKnown RBP17.28■□□□□ 0.36
CTNS-202ENST00000381870 BRD3Q15059 726 aa17.28■□□□□ 0.36
CTNS-202ENST00000381870 BEND6Q5SZJ8 279 aaPredicted RBP17.28■□□□□ 0.36
CTNS-202ENST00000381870 A0A1W2PQ27 194 aa17.28■□□□□ 0.36
CTNS-202ENST00000381870 A0A1W2PQ64 194 aa17.28■□□□□ 0.36
CTNS-202ENST00000381870 A0A1W2PQD8 194 aa17.28■□□□□ 0.36
CTNS-202ENST00000381870 SF3A1Q15459 793 aaKnown RBP17.28■□□□□ 0.36
CTNS-202ENST00000381870 NCAPGQ9BPX3 1015 aa17.28■□□□□ 0.36
CTNS-202ENST00000381870 PLEKHA4Q9H4M7 779 aa17.28■□□□□ 0.36
CTNS-202ENST00000381870 LRRC37A3O60309 1634 aa17.28■□□□□ 0.36
CTNS-202ENST00000381870 ZNF202O95125 648 aa17.27■□□□□ 0.36
CTNS-202ENST00000381870 JAKMIP3Q5VZ66 844 aa17.27■□□□□ 0.36
CTNS-202ENST00000381870 STOX1Q6ZVD7 989 aa17.27■□□□□ 0.36
CTNS-202ENST00000381870 LINC00301Q8NCQ3 95 aa17.27■□□□□ 0.36
CTNS-202ENST00000381870 ANKZF1Q9H8Y5 726 aa17.27■□□□□ 0.36
CTNS-202ENST00000381870 RTEL1Q9NZ71 1219 aa17.27■□□□□ 0.36
CTNS-202ENST00000381870 AKAP2Q9Y2D5 859 aa17.27■□□□□ 0.36
CTNS-202ENST00000381870 IKBKBO14920 756 aa17.27■□□□□ 0.35
CTNS-202ENST00000381870 RPS6KA5O75582 802 aa17.27■□□□□ 0.35
CTNS-202ENST00000381870 KARSQ15046 597 aaKnown RBP17.27■□□□□ 0.35
CTNS-202ENST00000381870 STK38Q15208 465 aa17.27■□□□□ 0.35
CTNS-202ENST00000381870 OTUD7BQ6GQQ9 843 aa17.27■□□□□ 0.35
CTNS-202ENST00000381870 MYCBPQ99417 103 aaPredicted RBP17.27■□□□□ 0.35
CTNS-202ENST00000381870 IRX2Q9BZI1 471 aaPredicted RBP17.27■□□□□ 0.35
CTNS-202ENST00000381870 ATP2B1P20020 1258 aa17.26■□□□□ 0.35
CTNS-202ENST00000381870 PNKPQ96T60 521 aa17.26■□□□□ 0.35
CTNS-202ENST00000381870 DESI2Q9BSY9 194 aa17.26■□□□□ 0.35
CTNS-202ENST00000381870 C9orf78Q9NZ63 289 aaPredicted RBP17.26■□□□□ 0.35
CTNS-202ENST00000381870 PUF60Q9UHX1 559 aaKnown RBP17.26■□□□□ 0.35
CTNS-202ENST00000381870 NDUFB9Q9Y6M9 179 aa17.26■□□□□ 0.35
CTNS-202ENST00000381870 ACEP12821 1306 aa17.26■□□□□ 0.35
CTNS-202ENST00000381870 LRRC31Q6UY01 552 aa17.26■□□□□ 0.35
CTNS-202ENST00000381870 HDXQ7Z353 690 aa17.26■□□□□ 0.35
CTNS-202ENST00000381870 CCDC12Q8WUD4 166 aaPredicted RBP17.26■□□□□ 0.35
CTNS-202ENST00000381870 BAG1Q99933 345 aaPredicted RBP17.26■□□□□ 0.35
CTNS-202ENST00000381870 IGSF1Q8N6C5 1336 aa17.26■□□□□ 0.35
CTNS-202ENST00000381870 METP08581 1390 aa17.25■□□□□ 0.35
CTNS-202ENST00000381870 CBFA2T2O43439 604 aa17.25■□□□□ 0.35
CTNS-202ENST00000381870 PHACTR2O75167 634 aa17.25■□□□□ 0.35
CTNS-202ENST00000381870 POLR3DP05423 398 aaPredicted RBP17.25■□□□□ 0.35
CTNS-202ENST00000381870 CORO7P57737 925 aa17.25■□□□□ 0.35
CTNS-202ENST00000381870 CHMP4BP1P59074 171 aa17.25■□□□□ 0.35
CTNS-202ENST00000381870 PDILTQ8N807 584 aa17.25■□□□□ 0.35
CTNS-202ENST00000381870 GPATCH11Q8N954 259 aa17.25■□□□□ 0.35
CTNS-202ENST00000381870 INTS13Q9NVM9 706 aa17.25■□□□□ 0.35
CTNS-202ENST00000381870 E2F4Q16254 413 aa17.25■□□□□ 0.35
CTNS-202ENST00000381870 HSP90AA4PQ58FG1 418 aa17.25■□□□□ 0.35
CTNS-202ENST00000381870 PPM1EQ8WY54 764 aa17.25■□□□□ 0.35
CTNS-202ENST00000381870 ABCB6Q9NP58 842 aa17.25■□□□□ 0.35
CTNS-202ENST00000381870 G3BP1Q13283 466 aaKnown RBP eCLIP17.24■□□□□ 0.35
CTNS-202ENST00000381870 HNRNPLLQ8WVV9 542 aaKnown RBP17.24■□□□□ 0.35
CTNS-202ENST00000381870 SALL1Q9NSC2 1324 aa17.24■□□□□ 0.35
CTNS-202ENST00000381870 ADKP55263 362 aaKnown RBP17.24■□□□□ 0.35
CTNS-202ENST00000381870 MYL5Q02045 173 aa17.24■□□□□ 0.35
CTNS-202ENST00000381870 GOLGA6L9A6NEM1 432 aa17.23■□□□□ 0.35
CTNS-202ENST00000381870 SPTLC2O15270 562 aa17.23■□□□□ 0.35
CTNS-202ENST00000381870 CUTAO60888 179 aa17.23■□□□□ 0.35
CTNS-202ENST00000381870 PFKFB1P16118 471 aa17.23■□□□□ 0.35
CTNS-202ENST00000381870 CWF19L2Q2TBE0 894 aaKnown RBP17.23■□□□□ 0.35
CTNS-202ENST00000381870 SRGAP1Q7Z6B7 1085 aa17.23■□□□□ 0.35
CTNS-202ENST00000381870 BICC1Q9H694 974 aaKnown RBP17.23■□□□□ 0.35
CTNS-202ENST00000381870 FANCLQ9NW38 375 aa17.23■□□□□ 0.35
CTNS-202ENST00000381870 L1RE1Q9UN81 338 aa17.23■□□□□ 0.35
CTNS-202ENST00000381870 USP31Q70CQ4 1352 aa17.23■□□□□ 0.35
CTNS-202ENST00000381870 KLHDC4Q8TBB5 520 aa17.23■□□□□ 0.35
CTNS-202ENST00000381870 MRPL44Q9H9J2 332 aaKnown RBP17.23■□□□□ 0.35
CTNS-202ENST00000381870 CARMIL3Q8ND23 1372 aa17.23■□□□□ 0.35
CTNS-202ENST00000381870 EIF3JO75822 258 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms