RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 PTCD1O75127 700 aaKnown RBP16.12■□□□□ 0.17
SDC1-202ENST00000381150 LMOD1P29536 600 aaPredicted RBP16.12■□□□□ 0.17
SDC1-202ENST00000381150 MAP4K1Q92918 833 aa16.12■□□□□ 0.17
SDC1-202ENST00000381150 UBE3BQ7Z3V4 1068 aa16.11■□□□□ 0.17
SDC1-202ENST00000381150 TM6SF1Q9BZW5 370 aa16.11■□□□□ 0.17
SDC1-202ENST00000381150 ST5P78524 1137 aa16.11■□□□□ 0.17
SDC1-202ENST00000381150 CARD6Q9BX69 1037 aa16.11■□□□□ 0.17
SDC1-202ENST00000381150 SLAIN2Q9P270 581 aa16.11■□□□□ 0.17
SDC1-202ENST00000381150 PCDH11XQ9BZA7 1347 aa16.11■□□□□ 0.17
SDC1-202ENST00000381150 PCDH11YQ9BZA8 1340 aa16.11■□□□□ 0.17
SDC1-202ENST00000381150 A0A1B0GVL5 298 aa16.11■□□□□ 0.17
SDC1-202ENST00000381150 ERVV-2B6SEH9 535 aa16.11■□□□□ 0.17
SDC1-202ENST00000381150 PNMA6AP0CW24 399 aaPredicted RBP16.11■□□□□ 0.17
SDC1-202ENST00000381150 LMAN1P49257 510 aa16.11■□□□□ 0.17
SDC1-202ENST00000381150 PRDM11Q9NQV5 511 aa16.11■□□□□ 0.17
SDC1-202ENST00000381150 RAD51AP2Q09MP3 1159 aa16.1■□□□□ 0.17
SDC1-202ENST00000381150 A0A087WZG4 1122 aa16.1■□□□□ 0.17
SDC1-202ENST00000381150 H7C1W4 665 aa16.1■□□□□ 0.17
SDC1-202ENST00000381150 CCZ1BP86790 482 aa16.1■□□□□ 0.17
SDC1-202ENST00000381150 CCZ1P86791 482 aaPredicted RBP16.1■□□□□ 0.17
SDC1-202ENST00000381150 PDILTQ8N807 584 aa16.1■□□□□ 0.17
SDC1-202ENST00000381150 DBNLQ9UJU6 430 aaKnown RBP16.1■□□□□ 0.17
SDC1-202ENST00000381150 CFAP45Q9UL16 551 aa16.1■□□□□ 0.17
SDC1-202ENST00000381150 A0A0D9SFI3 127 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 FOXO4P98177 505 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 TOM1L2Q6ZVM7 507 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 CHST3Q7LGC8 479 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 RAB11FIP4Q86YS3 637 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 STK11IPQ8N1F8 1099 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 XPO4Q9C0E2 1151 aaKnown RBP16.09■□□□□ 0.17
SDC1-202ENST00000381150 ANO10Q9NW15 660 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 RSPH14Q9UHP6 348 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 TJP1Q07157 1748 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 CHGBP05060 677 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 PDIA4P13667 645 aaKnown RBP16.09■□□□□ 0.17
SDC1-202ENST00000381150 CCDC191Q8NCU4 936 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 JCADQ9P266 1359 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 HIP1O00291 1037 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 NEMFO60524 1076 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 TFCP2Q12800 502 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 MED23Q9ULK4 1368 aa16.09■□□□□ 0.17
SDC1-202ENST00000381150 TRIM66O15016 1216 aa16.08■□□□□ 0.17
SDC1-202ENST00000381150 IQCB1Q15051 598 aa16.08■□□□□ 0.17
SDC1-202ENST00000381150 TNNI3KQ59H18 835 aa16.08■□□□□ 0.17
SDC1-202ENST00000381150 CCDC129Q6ZRS4 1044 aa16.08■□□□□ 0.17
SDC1-202ENST00000381150 TTLL7Q6ZT98 887 aa16.08■□□□□ 0.17
SDC1-202ENST00000381150 Q6ZUG5 572 aa16.08■□□□□ 0.17
SDC1-202ENST00000381150 NYAP1Q6ZVC0 841 aa16.08■□□□□ 0.17
SDC1-202ENST00000381150 PPP1R13BQ96KQ4 1090 aa16.08■□□□□ 0.17
SDC1-202ENST00000381150 CARD10Q9BWT7 1032 aa16.08■□□□□ 0.17
SDC1-202ENST00000381150 FPGT-TNNI3KV9GXZ4 949 aa16.08■□□□□ 0.17
SDC1-202ENST00000381150 POLR3DP05423 398 aaPredicted RBP16.08■□□□□ 0.16
SDC1-202ENST00000381150 ATP5JP18859 108 aa16.08■□□□□ 0.16
SDC1-202ENST00000381150 OTUD7BQ6GQQ9 843 aa16.08■□□□□ 0.16
SDC1-202ENST00000381150 SEC62Q99442 399 aaKnown RBP16.08■□□□□ 0.16
SDC1-202ENST00000381150 NAT10Q9H0A0 1025 aaKnown RBP16.08■□□□□ 0.16
SDC1-202ENST00000381150 NCOA5Q9HCD5 579 aaKnown RBP16.08■□□□□ 0.16
SDC1-202ENST00000381150 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.08■□□□□ 0.16
SDC1-202ENST00000381150 TNS2Q63HR2 1409 aa16.08■□□□□ 0.16
SDC1-202ENST00000381150 TPM4P67936 248 aa16.07■□□□□ 0.16
SDC1-202ENST00000381150 GOLPH3LQ9H4A5 285 aa16.07■□□□□ 0.16
SDC1-202ENST00000381150 GPS2Q13227 327 aa16.07■□□□□ 0.16
SDC1-202ENST00000381150 PAXIP1Q6ZW49 1069 aaPredicted RBP16.07■□□□□ 0.16
SDC1-202ENST00000381150 UTP14AQ9BVJ6 771 aaKnown RBP16.07■□□□□ 0.16
SDC1-202ENST00000381150 ELP1O95163 1332 aa16.07■□□□□ 0.16
SDC1-202ENST00000381150 ANKRD65E5RJM6 399 aa16.07■□□□□ 0.16
SDC1-202ENST00000381150 SERPINC1P01008 464 aa16.07■□□□□ 0.16
SDC1-202ENST00000381150 A1BGP04217 495 aa16.07■□□□□ 0.16
SDC1-202ENST00000381150 OAS2P29728 719 aaKnown RBP16.07■□□□□ 0.16
SDC1-202ENST00000381150 ANKRD1Q15327 319 aa16.07■□□□□ 0.16
SDC1-202ENST00000381150 E4F1Q66K89 784 aaPredicted RBP16.07■□□□□ 0.16
SDC1-202ENST00000381150 SMARCE1Q969G3 411 aa16.07■□□□□ 0.16
SDC1-202ENST00000381150 MRFAP1L1Q96HT8 127 aa16.07■□□□□ 0.16
SDC1-202ENST00000381150 TOGARAM1Q9Y4F4 1720 aa16.07■□□□□ 0.16
SDC1-202ENST00000381150 IL2RBP14784 551 aa16.06■□□□□ 0.16
SDC1-202ENST00000381150 CYP2C19P33261 490 aa16.06■□□□□ 0.16
SDC1-202ENST00000381150 ZNF589Q86UQ0 364 aaPredicted RBP16.06■□□□□ 0.16
SDC1-202ENST00000381150 USP28Q96RU2 1077 aa16.06■□□□□ 0.16
SDC1-202ENST00000381150 FHOD1Q9Y613 1164 aa16.06■□□□□ 0.16
SDC1-202ENST00000381150 RPS6KB1P23443 525 aa16.06■□□□□ 0.16
SDC1-202ENST00000381150 PLA2G4AP47712 749 aa16.06■□□□□ 0.16
SDC1-202ENST00000381150 TOMM22Q9NS69 142 aa16.06■□□□□ 0.16
SDC1-202ENST00000381150 ZNF335Q9H4Z2 1342 aaPredicted RBP16.06■□□□□ 0.16
SDC1-202ENST00000381150 CFAP100Q494V2 611 aa16.06■□□□□ 0.16
SDC1-202ENST00000381150 TTLL5Q6EMB2 1281 aa16.06■□□□□ 0.16
SDC1-202ENST00000381150 LMBR1LQ6UX01 489 aa16.06■□□□□ 0.16
SDC1-202ENST00000381150 EVCP57679 992 aa16.05■□□□□ 0.16
SDC1-202ENST00000381150 MCM6Q14566 821 aa16.05■□□□□ 0.16
SDC1-202ENST00000381150 DPCR1Q3MIW9 517 aa16.05■□□□□ 0.16
SDC1-202ENST00000381150 ATG9AQ7Z3C6 839 aa16.05■□□□□ 0.16
SDC1-202ENST00000381150 CHMP4CQ96CF2 233 aa16.05■□□□□ 0.16
SDC1-202ENST00000381150 TOB2Q14106 344 aaPredicted RBP16.05■□□□□ 0.16
SDC1-202ENST00000381150 FEZ2Q9UHY8 353 aaPredicted RBP16.05■□□□□ 0.16
SDC1-202ENST00000381150 PHACTR2O75167 634 aa16.04■□□□□ 0.16
SDC1-202ENST00000381150 TAF5LO75529 589 aa16.04■□□□□ 0.16
SDC1-202ENST00000381150 GSDMDP57764 484 aa16.04■□□□□ 0.16
SDC1-202ENST00000381150 STK38Q15208 465 aa16.04■□□□□ 0.16
SDC1-202ENST00000381150 TSGA10IPQ3SY00 556 aa16.04■□□□□ 0.16
SDC1-202ENST00000381150 DHX40Q8IX18 779 aaKnown RBP16.04■□□□□ 0.16
SDC1-202ENST00000381150 DBNDD2Q9BQY9 259 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms