RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 KDM4AO75164 1064 aa13.71□□□□□ -0.21
PITRM1-202ENST00000380989 MCM5P33992 734 aa13.71□□□□□ -0.21
PITRM1-202ENST00000380989 SLFNL1Q499Z3 407 aa13.71□□□□□ -0.21
PITRM1-202ENST00000380989 METTL24Q5JXM2 366 aa13.71□□□□□ -0.21
PITRM1-202ENST00000380989 ECHDC1Q9NTX5 307 aa13.71□□□□□ -0.21
PITRM1-202ENST00000380989 A0A1B0GUL7 405 aa13.71□□□□□ -0.22
PITRM1-202ENST00000380989 DDR1Q08345 913 aa13.71□□□□□ -0.22
PITRM1-202ENST00000380989 CUL4AQ13619 759 aa13.71□□□□□ -0.22
PITRM1-202ENST00000380989 ADCK5Q3MIX3 580 aa13.71□□□□□ -0.22
PITRM1-202ENST00000380989 BBXQ8WY36 941 aaPredicted RBP13.71□□□□□ -0.22
PITRM1-202ENST00000380989 CELF1Q92879 486 aaKnown RBP13.71□□□□□ -0.22
PITRM1-202ENST00000380989 IL15P40933 162 aaPredicted RBP13.7□□□□□ -0.22
PITRM1-202ENST00000380989 TFIP11Q9UBB9 837 aaKnown RBP13.7□□□□□ -0.22
PITRM1-202ENST00000380989 RIPOR2Q9Y4F9 1068 aa13.7□□□□□ -0.22
PITRM1-202ENST00000380989 SPEF2Q9C093 1822 aa13.7□□□□□ -0.22
PITRM1-202ENST00000380989 RUFY3Q7L099 469 aa13.7□□□□□ -0.22
PITRM1-202ENST00000380989 CARMIL3Q8ND23 1372 aa13.7□□□□□ -0.22
PITRM1-202ENST00000380989 PI16Q6UXB8 463 aa13.7□□□□□ -0.22
PITRM1-202ENST00000380989 KIAA1524Q8TCG1 905 aa13.7□□□□□ -0.22
PITRM1-202ENST00000380989 ERCC4Q92889 916 aaPredicted RBP13.7□□□□□ -0.22
PITRM1-202ENST00000380989 CAMKK2Q96RR4 588 aa13.7□□□□□ -0.22
PITRM1-202ENST00000380989 DNAJC2Q99543 621 aaKnown RBP13.7□□□□□ -0.22
PITRM1-202ENST00000380989 CEP126Q9P2H0 1117 aa13.7□□□□□ -0.22
PITRM1-202ENST00000380989 FOSBP53539 338 aa13.69□□□□□ -0.22
PITRM1-202ENST00000380989 SNRKQ9NRH2 765 aa13.69□□□□□ -0.22
PITRM1-202ENST00000380989 RIC1Q4ADV7 1423 aa13.69□□□□□ -0.22
PITRM1-202ENST00000380989 LIG1P18858 919 aa13.69□□□□□ -0.22
PITRM1-202ENST00000380989 TPTE2Q6XPS3 522 aa13.69□□□□□ -0.22
PITRM1-202ENST00000380989 CCDC186Q7Z3E2 898 aa13.69□□□□□ -0.22
PITRM1-202ENST00000380989 CCDC152Q4G0S7 254 aa13.69□□□□□ -0.22
PITRM1-202ENST00000380989 CCDC183Q5T5S1 534 aa13.69□□□□□ -0.22
PITRM1-202ENST00000380989 PRR5LQ6MZQ0 368 aa13.69□□□□□ -0.22
PITRM1-202ENST00000380989 MPHOSPH8Q99549 860 aa13.69□□□□□ -0.22
PITRM1-202ENST00000380989 PNPLA7Q6ZV29 1317 aa13.68□□□□□ -0.22
PITRM1-202ENST00000380989 TUBGCP6Q96RT7 1819 aa13.68□□□□□ -0.22
PITRM1-202ENST00000380989 ERICH4A6NGS2 130 aa13.68□□□□□ -0.22
PITRM1-202ENST00000380989 ZNF771Q7L3S4 317 aaPredicted RBP13.68□□□□□ -0.22
PITRM1-202ENST00000380989 DRC7Q8IY82 874 aa13.68□□□□□ -0.22
PITRM1-202ENST00000380989 STX6O43752 255 aa13.68□□□□□ -0.22
PITRM1-202ENST00000380989 SERPINB2P05120 415 aa13.68□□□□□ -0.22
PITRM1-202ENST00000380989 CNBD1Q8NA66 436 aa13.68□□□□□ -0.22
PITRM1-202ENST00000380989 USP27XA6NNY8 438 aa13.67□□□□□ -0.22
PITRM1-202ENST00000380989 CASTP20810 708 aaKnown RBP13.67□□□□□ -0.22
PITRM1-202ENST00000380989 NCBP1Q09161 790 aaKnown RBP13.67□□□□□ -0.22
PITRM1-202ENST00000380989 SCARF1Q14162 830 aa13.67□□□□□ -0.22
PITRM1-202ENST00000380989 DDX46Q7L014 1031 aaKnown RBP13.67□□□□□ -0.22
PITRM1-202ENST00000380989 SYAP1Q96A49 352 aaPredicted RBP13.67□□□□□ -0.22
PITRM1-202ENST00000380989 TAF6LQ9Y6J9 622 aa13.67□□□□□ -0.22
PITRM1-202ENST00000380989 TNRC6CQ9HCJ0 1690 aaKnown RBP13.67□□□□□ -0.22
PITRM1-202ENST00000380989 XAGE2Q96GT9 111 aa13.67□□□□□ -0.22
PITRM1-202ENST00000380989 CASZ1Q86V15 1759 aa13.67□□□□□ -0.22
PITRM1-202ENST00000380989 CIAO1O76071 339 aa13.67□□□□□ -0.22
PITRM1-202ENST00000380989 HMGN5P82970 282 aaKnown RBP13.67□□□□□ -0.22
PITRM1-202ENST00000380989 NLRP3Q96P20 1036 aa13.67□□□□□ -0.22
PITRM1-202ENST00000380989 SNX14Q9Y5W7 946 aa13.67□□□□□ -0.22
PITRM1-202ENST00000380989 GLRX3O76003 335 aaKnown RBP13.66□□□□□ -0.22
PITRM1-202ENST00000380989 ZSCAN22P10073 491 aaPredicted RBP13.66□□□□□ -0.22
PITRM1-202ENST00000380989 ADRA2BP18089 450 aa13.66□□□□□ -0.22
PITRM1-202ENST00000380989 GJB2P29033 226 aa13.66□□□□□ -0.22
PITRM1-202ENST00000380989 CEBPZQ03701 1054 aaKnown RBP13.66□□□□□ -0.22
PITRM1-202ENST00000380989 STK3Q13188 491 aa13.66□□□□□ -0.22
PITRM1-202ENST00000380989 TM4SF1P30408 202 aa13.66□□□□□ -0.22
PITRM1-202ENST00000380989 VGLL2Q8N8G2 317 aa13.66□□□□□ -0.22
PITRM1-202ENST00000380989 DDX11Q96FC9 970 aa13.66□□□□□ -0.22
PITRM1-202ENST00000380989 PRIMPOLQ96LW4 560 aa13.66□□□□□ -0.22
PITRM1-202ENST00000380989 ZNF609O15014 1411 aa13.66□□□□□ -0.22
PITRM1-202ENST00000380989 TTC41PQ6P2S7 1318 aa13.66□□□□□ -0.22
PITRM1-202ENST00000380989 WDR33Q9C0J8 1336 aaKnown RBP13.66□□□□□ -0.22
PITRM1-202ENST00000380989 MTERF4Q7Z6M4 381 aaKnown RBP13.66□□□□□ -0.22
PITRM1-202ENST00000380989 NYXQ9GZU5 481 aa13.66□□□□□ -0.22
PITRM1-202ENST00000380989 IQSEC3Q9UPP2 1182 aaPredicted RBP13.66□□□□□ -0.22
PITRM1-202ENST00000380989 POLRMTO00411 1230 aaKnown RBP13.65□□□□□ -0.22
PITRM1-202ENST00000380989 PTH1RQ03431 593 aa13.65□□□□□ -0.22
PITRM1-202ENST00000380989 ST3GAL1Q11201 340 aa13.65□□□□□ -0.22
PITRM1-202ENST00000380989 PLCD3Q8N3E9 789 aa13.65□□□□□ -0.22
PITRM1-202ENST00000380989 TAOK2Q9UL54 1235 aa13.65□□□□□ -0.22
PITRM1-202ENST00000380989 LAMB2P55268 1798 aa13.65□□□□□ -0.22
PITRM1-202ENST00000380989 PDE8BO95263 885 aa13.65□□□□□ -0.22
PITRM1-202ENST00000380989 F13A1P00488 732 aa13.65□□□□□ -0.22
PITRM1-202ENST00000380989 IGHMBP2P38935 993 aaKnown RBP13.65□□□□□ -0.22
PITRM1-202ENST00000380989 FKBP4Q02790 459 aaKnown RBP eCLIP13.65□□□□□ -0.22
PITRM1-202ENST00000380989 CHRNDQ07001 517 aa13.65□□□□□ -0.22
PITRM1-202ENST00000380989 GORABQ5T7V8 394 aa13.65□□□□□ -0.22
PITRM1-202ENST00000380989 GPATCH3Q96I76 525 aa13.65□□□□□ -0.22
PITRM1-202ENST00000380989 FAM227BQ96M60 508 aa13.65□□□□□ -0.22
PITRM1-202ENST00000380989 FUCA2Q9BTY2 467 aa13.65□□□□□ -0.22
PITRM1-202ENST00000380989 TRMT1Q9NXH9 659 aaKnown RBP13.65□□□□□ -0.22
PITRM1-202ENST00000380989 MMP10P09238 476 aa13.65□□□□□ -0.23
PITRM1-202ENST00000380989 SF3B2Q13435 895 aaKnown RBP13.65□□□□□ -0.23
PITRM1-202ENST00000380989 CCDC144BQ3MJ40 725 aa13.65□□□□□ -0.23
PITRM1-202ENST00000380989 CCDC144CPQ8IYA2 1237 aa13.65□□□□□ -0.23
PITRM1-202ENST00000380989 SPTLC3Q9NUV7 552 aa13.65□□□□□ -0.23
PITRM1-202ENST00000380989 GOLIM4O00461 696 aa13.64□□□□□ -0.23
PITRM1-202ENST00000380989 KLRK1P26718 216 aa13.64□□□□□ -0.23
PITRM1-202ENST00000380989 FGD1P98174 961 aa13.64□□□□□ -0.23
PITRM1-202ENST00000380989 SLC15A2Q16348 729 aa13.64□□□□□ -0.23
PITRM1-202ENST00000380989 CDC37L1Q7L3B6 337 aa13.64□□□□□ -0.23
PITRM1-202ENST00000380989 SMC3Q9UQE7 1217 aa13.64□□□□□ -0.23
PITRM1-202ENST00000380989 COL24A1Q17RW2 1714 aa13.64□□□□□ -0.23
PITRM1-202ENST00000380989 TTC6Q86TZ1 520 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms