RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 UBA7P41226 1012 aa14.13□□□□□ -0.15
GABPB1-203ENST00000380877 OSBPL3Q9H4L5 887 aa14.13□□□□□ -0.15
GABPB1-203ENST00000380877 NCAPD2Q15021 1401 aa14.13□□□□□ -0.15
GABPB1-203ENST00000380877 CALM1P0DP23 149 aa14.13□□□□□ -0.15
GABPB1-203ENST00000380877 CALM2P0DP24 149 aa14.13□□□□□ -0.15
GABPB1-203ENST00000380877 CALM3P0DP25 149 aa14.13□□□□□ -0.15
GABPB1-203ENST00000380877 TCP11L1Q9NUJ3 509 aa14.13□□□□□ -0.15
GABPB1-203ENST00000380877 DACT1Q9NYF0 836 aa14.13□□□□□ -0.15
GABPB1-203ENST00000380877 MYO1BO43795 1136 aa14.12□□□□□ -0.15
GABPB1-203ENST00000380877 STX1AQ16623 288 aa14.12□□□□□ -0.15
GABPB1-203ENST00000380877 ZKSCAN3Q9BRR0 538 aa14.12□□□□□ -0.15
GABPB1-203ENST00000380877 FBXO3Q9UK99 471 aa14.12□□□□□ -0.15
GABPB1-203ENST00000380877 A0A0D9SFI3 127 aa14.12□□□□□ -0.15
GABPB1-203ENST00000380877 LRSAM1Q6UWE0 723 aa14.12□□□□□ -0.15
GABPB1-203ENST00000380877 RTL9Q8NET4 1388 aa14.12□□□□□ -0.15
GABPB1-203ENST00000380877 ZNF532Q9HCE3 1301 aa14.12□□□□□ -0.15
GABPB1-203ENST00000380877 TMEM132AQ24JP5 1023 aa14.12□□□□□ -0.15
GABPB1-203ENST00000380877 CT47A1Q5JQC4 288 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-203ENST00000380877 MRPS27Q92552 414 aaKnown RBP14.12□□□□□ -0.15
GABPB1-203ENST00000380877 GGA1Q9UJY5 639 aa14.12□□□□□ -0.15
GABPB1-203ENST00000380877 SYKP43405 635 aa14.12□□□□□ -0.15
GABPB1-203ENST00000380877 GREM2Q9H772 168 aa14.12□□□□□ -0.15
GABPB1-203ENST00000380877 HDAC9Q9UKV0 1011 aa14.12□□□□□ -0.15
GABPB1-203ENST00000380877 GPS2Q13227 327 aa14.11□□□□□ -0.15
GABPB1-203ENST00000380877 TNS3Q68CZ2 1445 aa14.11□□□□□ -0.15
GABPB1-203ENST00000380877 CCDC148Q8NFR7 591 aa14.11□□□□□ -0.15
GABPB1-203ENST00000380877 TM6SF1Q9BZW5 370 aa14.11□□□□□ -0.15
GABPB1-203ENST00000380877 DBNLQ9UJU6 430 aaKnown RBP14.11□□□□□ -0.15
GABPB1-203ENST00000380877 WWC3Q9ULE0 1092 aa14.11□□□□□ -0.15
GABPB1-203ENST00000380877 BMP15O95972 392 aa14.11□□□□□ -0.15
GABPB1-203ENST00000380877 SFPQP23246 707 aaKnown RBP eCLIP14.11□□□□□ -0.15
GABPB1-203ENST00000380877 MARCKSP29966 332 aaPredicted RBP14.11□□□□□ -0.15
GABPB1-203ENST00000380877 CAVIN2O95810 425 aa14.11□□□□□ -0.15
GABPB1-203ENST00000380877 TMEM87BQ96K49 555 aa14.11□□□□□ -0.15
GABPB1-203ENST00000380877 HAUS7Q99871 368 aa14.11□□□□□ -0.15
GABPB1-203ENST00000380877 PUS3Q9BZE2 481 aaKnown RBP14.11□□□□□ -0.15
GABPB1-203ENST00000380877 ANGEL1Q9UNK9 670 aaKnown RBP14.11□□□□□ -0.15
GABPB1-203ENST00000380877 HEATR3Q7Z4Q2 680 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 UNC5CLQ8IV45 518 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 TEX11Q8IYF3 940 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 WDR66Q8TBY9 1149 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 ARGLU1Q9NWB6 273 aaPredicted RBP14.1□□□□□ -0.15
GABPB1-203ENST00000380877 C1orf167Q5SNV9 1468 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 EIF5P55010 431 aaKnown RBP14.1□□□□□ -0.15
GABPB1-203ENST00000380877 PTH1RQ03431 593 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 DEF6Q9H4E7 631 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 ADGRB1O14514 1584 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 SSH2Q76I76 1423 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 SPTLC2O15270 562 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 PPP4R3BQ5MIZ7 849 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 DSCC1Q9BVC3 393 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 STK32BQ9NY57 414 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 PALD1Q9ULE6 856 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 KIAA1210Q9ULL0 1709 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 TNIP1Q15025 636 aa14.1□□□□□ -0.15
GABPB1-203ENST00000380877 NCOA5Q9HCD5 579 aaKnown RBP14.1□□□□□ -0.15
GABPB1-203ENST00000380877 NBPF14Q5TI25 921 aa14.09□□□□□ -0.15
GABPB1-203ENST00000380877 ISM2Q6H9L7 571 aa14.09□□□□□ -0.15
GABPB1-203ENST00000380877 SEC62Q99442 399 aaKnown RBP14.09□□□□□ -0.15
GABPB1-203ENST00000380877 KANK3Q6NY19 840 aa14.09□□□□□ -0.15
GABPB1-203ENST00000380877 TLR7Q9NYK1 1049 aaKnown RBP14.09□□□□□ -0.15
GABPB1-203ENST00000380877 TRPC5Q9UL62 973 aaPredicted RBP14.09□□□□□ -0.15
GABPB1-203ENST00000380877 TRIM75PA6NK02 468 aa14.09□□□□□ -0.15
GABPB1-203ENST00000380877 PRDM1O75626 825 aa14.09□□□□□ -0.15
GABPB1-203ENST00000380877 APBA3O96018 575 aa14.09□□□□□ -0.15
GABPB1-203ENST00000380877 USPL1Q5W0Q7 1092 aa14.09□□□□□ -0.15
GABPB1-203ENST00000380877 FAM177A1Q8N128 213 aaPredicted RBP14.09□□□□□ -0.15
GABPB1-203ENST00000380877 CAGE1Q8TC20 777 aa14.09□□□□□ -0.15
GABPB1-203ENST00000380877 CALML4Q96GE6 196 aa14.08□□□□□ -0.15
GABPB1-203ENST00000380877 CLIP2Q9UDT6 1046 aa14.08□□□□□ -0.15
GABPB1-203ENST00000380877 OVOS2A0A0J9YW53 1432 aa14.08□□□□□ -0.15
GABPB1-203ENST00000380877 OVOS2Q6IE36 1432 aa14.08□□□□□ -0.15
GABPB1-203ENST00000380877 PREX1Q8TCU6 1659 aa14.08□□□□□ -0.16
GABPB1-203ENST00000380877 VWDEQ8N2E2 1590 aa14.08□□□□□ -0.16
GABPB1-203ENST00000380877 BRAPQ7Z569 592 aa14.08□□□□□ -0.16
GABPB1-203ENST00000380877 TTC6Q86TZ1 520 aa14.08□□□□□ -0.16
GABPB1-203ENST00000380877 VSIG10Q8N0Z9 540 aa14.08□□□□□ -0.16
GABPB1-203ENST00000380877 PYM1Q9BRP8 204 aaKnown RBP14.08□□□□□ -0.16
GABPB1-203ENST00000380877 PDE8BO95263 885 aa14.08□□□□□ -0.16
GABPB1-203ENST00000380877 CPS1P31327 1500 aa14.08□□□□□ -0.16
GABPB1-203ENST00000380877 ADCY5O95622 1261 aa14.08□□□□□ -0.16
GABPB1-203ENST00000380877 CALML3P27482 149 aa14.08□□□□□ -0.16
GABPB1-203ENST00000380877 NAPAP54920 295 aa14.08□□□□□ -0.16
GABPB1-203ENST00000380877 FAM182BQ5T319 152 aa14.08□□□□□ -0.16
GABPB1-203ENST00000380877 AATFQ9NY61 560 aaKnown RBP eCLIP14.08□□□□□ -0.163e-7■■■□□ 15.6
GABPB1-203ENST00000380877 IDEP14735 1019 aa14.07□□□□□ -0.16
GABPB1-203ENST00000380877 LLPHQ9BRT6 129 aaKnown RBP14.07□□□□□ -0.16
GABPB1-203ENST00000380877 LUC7LQ9NQ29 371 aaKnown RBP14.07□□□□□ -0.16
GABPB1-203ENST00000380877 DTNBO60941 627 aa14.07□□□□□ -0.16
GABPB1-203ENST00000380877 UVSSAQ2YD98 709 aa14.07□□□□□ -0.16
GABPB1-203ENST00000380877 NLRP10Q86W26 655 aa14.07□□□□□ -0.16
GABPB1-203ENST00000380877 GPR108Q9NPR9 543 aa14.07□□□□□ -0.16
GABPB1-203ENST00000380877 FRMPD1Q5SYB0 1578 aa14.07□□□□□ -0.16
GABPB1-203ENST00000380877 CIAO1O76071 339 aa14.07□□□□□ -0.16
GABPB1-203ENST00000380877 CCDC112Q8NEF3 446 aa14.07□□□□□ -0.16
GABPB1-203ENST00000380877 MYO3AQ8NEV4 1616 aa14.07□□□□□ -0.16
GABPB1-203ENST00000380877 IQGAP1P46940 1657 aa14.07□□□□□ -0.16
GABPB1-203ENST00000380877 E7EWF7 191 aa14.07□□□□□ -0.16
GABPB1-203ENST00000380877 TOP1P11387 765 aaKnown RBP14.07□□□□□ -0.16
GABPB1-203ENST00000380877 POLA2Q14181 598 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms