RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 CLSTN2Q9H4D0 955 aa7.57□□□□□ -1.2
RIPK1-202ENST00000380409 KIAA0232Q92628 1395 aa7.57□□□□□ -1.2
RIPK1-202ENST00000380409 AP1G2O75843 785 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 AIMP1Q12904 312 aaKnown RBP7.56□□□□□ -1.2
RIPK1-202ENST00000380409 ESCO1Q5FWF5 840 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 TTLL5Q6EMB2 1281 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 RCSD1Q6JBY9 416 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 RINLQ6ZS11 566 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 FAM228AQ86W67 206 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 ARMC2Q8NEN0 867 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 CD248Q9HCU0 757 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 TRMT1Q9NXH9 659 aaKnown RBP7.56□□□□□ -1.2
RIPK1-202ENST00000380409 SMC3Q9UQE7 1217 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 FOXO3O43524 673 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 SYF2O95926 243 aaKnown RBP7.56□□□□□ -1.2
RIPK1-202ENST00000380409 TWISTNBQ3B726 338 aaPredicted RBP7.56□□□□□ -1.2
RIPK1-202ENST00000380409 MEX3CQ5U5Q3 659 aaKnown RBP7.56□□□□□ -1.2
RIPK1-202ENST00000380409 PARD3BQ8TEW8 1205 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 LMCD1Q9NZU5 365 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 FAM169AQ9Y6X4 670 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 TRPM2O94759 1503 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 CAMSAP1Q5T5Y3 1602 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 IMPDH2P12268 514 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 SYT1P21579 422 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 TXLNAP40222 546 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 PRPHP41219 470 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 NEK4P51957 841 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 GSDMDP57764 484 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 NLRP6P59044 892 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 TEFQ10587 303 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 ANKRD18AQ8IVF6 992 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 PLEKHF1Q96S99 279 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 HOMER3Q9NSC5 361 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 ZNF232Q9UNY5 417 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 MTMR6Q9Y217 621 aa7.56□□□□□ -1.2
RIPK1-202ENST00000380409 STX6O43752 255 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 IFIT2P09913 472 aaKnown RBP7.55□□□□□ -1.2
RIPK1-202ENST00000380409 LIG3P49916 1009 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 FOSBP53539 338 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 RBM12BQ8IXT5 1001 aaKnown RBP7.55□□□□□ -1.2
RIPK1-202ENST00000380409 ARHGAP45Q92619 1136 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 CARD6Q9BX69 1037 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 NUP62CLQ9H1M0 184 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 IRAK4Q9NWZ3 460 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 TRIM35Q9UPQ4 493 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 AMOTQ4VCS5 1084 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 TTC6Q86TZ1 520 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 IQCA1Q86XH1 822 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 ATL2Q8NHH9 583 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 ARHGEF1Q92888 912 aaKnown RBP7.55□□□□□ -1.2
RIPK1-202ENST00000380409 PAIP2Q9BPZ3 127 aaKnown RBP7.55□□□□□ -1.2
RIPK1-202ENST00000380409 CDHR2Q9BYE9 1310 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 PLEKHA4Q9H4M7 779 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 ATP6V0A4Q9HBG4 840 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 SPATS2LQ9NUQ6 558 aaKnown RBP7.55□□□□□ -1.2
RIPK1-202ENST00000380409 SBNO2Q9Y2G9 1366 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 PLCB4Q15147 1175 aa7.55□□□□□ -1.2
RIPK1-202ENST00000380409 YTHDF3Q7Z739 585 aaKnown RBP7.55□□□□□ -1.2
RIPK1-202ENST00000380409 DDX20Q9UHI6 824 aaKnown RBP7.55□□□□□ -1.2
RIPK1-202ENST00000380409 VWA3AA6NCI4 1184 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 TMPOP42166 694 aaKnown RBP7.54□□□□□ -1.2
RIPK1-202ENST00000380409 API5Q9BZZ5 524 aaKnown RBP7.54□□□□□ -1.2
RIPK1-202ENST00000380409 KDM4CQ9H3R0 1056 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 VIPAS39Q9H9C1 493 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 USP16Q9Y5T5 823 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 NPHP3Q7Z494 1330 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 MAP4K4O95819 1239 aaPredicted RBP7.54□□□□□ -1.2
RIPK1-202ENST00000380409 SLC4A2P04920 1241 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 ST3GAL1Q11201 340 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 GORABQ5T7V8 394 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 TMEM139Q8IV31 216 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 DDX11Q96FC9 970 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 C9orf78Q9NZ63 289 aaPredicted RBP7.54□□□□□ -1.2
RIPK1-202ENST00000380409 RTEL1Q9NZ71 1219 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 BLOC1S6Q9UL45 172 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 ODF2LQ9ULJ1 636 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 PTPRTO14522 1441 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 NSD3Q9BZ95 1437 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 TMEM94Q12767 1356 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 ZSCAN9O15535 394 aaPredicted RBP7.54□□□□□ -1.2
RIPK1-202ENST00000380409 DNM1Q05193 864 aaKnown RBP7.54□□□□□ -1.2
RIPK1-202ENST00000380409 C11orf57Q6ZUT1 292 aaPredicted RBP7.54□□□□□ -1.2
RIPK1-202ENST00000380409 HDXQ7Z353 690 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 OTUD7AQ8TE49 926 aaPredicted RBP7.54□□□□□ -1.2
RIPK1-202ENST00000380409 TBC1D5Q92609 795 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 TSPAN18Q96SJ8 248 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 SETBP1Q9Y6X0 1596 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 LRRC7Q96NW7 1537 aa7.54□□□□□ -1.2
RIPK1-202ENST00000380409 ZNF165P49910 485 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 CCDC150Q8NCX0 1101 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 PNKPQ96T60 521 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 FAM204AQ9H8W3 233 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 PHF8Q9UPP1 1060 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 FIBPO43427 364 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 RTN3O95197 1032 aaPredicted RBP7.53□□□□□ -1.2
RIPK1-202ENST00000380409 SPTY2D1Q68D10 685 aaPredicted RBP7.53□□□□□ -1.2
RIPK1-202ENST00000380409 FCHSD1Q86WN1 690 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 C3orf20Q8ND61 904 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 FBXW7Q969H0 707 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 ORAI2Q96SN7 254 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms