RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 FBXO41Q8TF61 875 aa23.64■■□□□ 1.37
PDLIM5-205ENST00000380180 ZNF532Q9HCE3 1301 aa23.64■■□□□ 1.37
PDLIM5-205ENST00000380180 TRAK2O60296 914 aa23.63■■□□□ 1.37
PDLIM5-205ENST00000380180 TTLL5Q6EMB2 1281 aa23.63■■□□□ 1.37
PDLIM5-205ENST00000380180 CCDC83Q8IWF9 413 aa23.63■■□□□ 1.37
PDLIM5-205ENST00000380180 BRD1O95696 1058 aa23.62■■□□□ 1.37
PDLIM5-205ENST00000380180 GYS1P13807 737 aa23.62■■□□□ 1.37
PDLIM5-205ENST00000380180 TXNRD1Q16881 649 aa23.62■■□□□ 1.37
PDLIM5-205ENST00000380180 TCRBV5S4A2TA0A5A2 114 aa23.62■■□□□ 1.37
PDLIM5-205ENST00000380180 CTNNA3Q9UI47 895 aa23.62■■□□□ 1.37
PDLIM5-205ENST00000380180 E7EWF7 191 aa23.61■■□□□ 1.37
PDLIM5-205ENST00000380180 FGAP02671 866 aa23.61■■□□□ 1.37
PDLIM5-205ENST00000380180 GYG1P46976 350 aa23.61■■□□□ 1.37
PDLIM5-205ENST00000380180 HMGB1P09429 215 aaKnown RBP23.6■■□□□ 1.37
PDLIM5-205ENST00000380180 ST3GAL1Q11201 340 aa23.6■■□□□ 1.37
PDLIM5-205ENST00000380180 MAP3K12Q12852 859 aa23.6■■□□□ 1.37
PDLIM5-205ENST00000380180 FOXD4L5Q5VV16 416 aaPredicted RBP23.6■■□□□ 1.37
PDLIM5-205ENST00000380180 NECAB1Q8N987 351 aa23.6■■□□□ 1.37
PDLIM5-205ENST00000380180 CNBD1Q8NA66 436 aa23.6■■□□□ 1.37
PDLIM5-205ENST00000380180 FOXD4L4Q8WXT5 416 aaPredicted RBP23.6■■□□□ 1.37
PDLIM5-205ENST00000380180 SMC3Q9UQE7 1217 aa23.6■■□□□ 1.37
PDLIM5-205ENST00000380180 ZNF804BA4D1E1 1349 aa23.6■■□□□ 1.37
PDLIM5-205ENST00000380180 IQSEC3Q9UPP2 1182 aaPredicted RBP23.6■■□□□ 1.37
PDLIM5-205ENST00000380180 TCHHQ07283 1943 aa23.6■■□□□ 1.37
PDLIM5-205ENST00000380180 MYH13Q9UKX3 1938 aa23.6■■□□□ 1.37
PDLIM5-205ENST00000380180 GOLGA6L22H0YM25 854 aa23.59■■□□□ 1.37
PDLIM5-205ENST00000380180 Q6ZUG5 572 aa23.59■■□□□ 1.37
PDLIM5-205ENST00000380180 DHX32Q7L7V1 743 aaKnown RBP23.59■■□□□ 1.37
PDLIM5-205ENST00000380180 MAGEB6Q8N7X4 407 aa23.59■■□□□ 1.37
PDLIM5-205ENST00000380180 PTMSP20962 102 aa23.58■■□□□ 1.37
PDLIM5-205ENST00000380180 IMMTQ16891 758 aaKnown RBP23.58■■□□□ 1.37
PDLIM5-205ENST00000380180 CAVIN4Q5BKX8 364 aa23.58■■□□□ 1.37
PDLIM5-205ENST00000380180 MCTP1Q6DN14 999 aa23.58■■□□□ 1.37
PDLIM5-205ENST00000380180 PRR5LQ6MZQ0 368 aa23.58■■□□□ 1.37
PDLIM5-205ENST00000380180 GNL3LQ9NVN8 582 aaKnown RBP23.58■■□□□ 1.37
PDLIM5-205ENST00000380180 FAM84BQ96KN1 310 aaPredicted RBP23.57■■□□□ 1.36
PDLIM5-205ENST00000380180 ANKRD2Q9GZV1 360 aa23.57■■□□□ 1.36
PDLIM5-205ENST00000380180 HAND2P61296 217 aa23.57■■□□□ 1.36
PDLIM5-205ENST00000380180 EXOSC10Q01780 885 aaKnown RBP23.57■■□□□ 1.36
PDLIM5-205ENST00000380180 GJB2P29033 226 aa23.56■■□□□ 1.36
PDLIM5-205ENST00000380180 VPS37DQ86XT2 251 aa23.56■■□□□ 1.36
PDLIM5-205ENST00000380180 LRRC2Q9BYS8 371 aa23.56■■□□□ 1.36
PDLIM5-205ENST00000380180 DTNBO60941 627 aa23.55■■□□□ 1.36
PDLIM5-205ENST00000380180 SERPINB2P05120 415 aa23.55■■□□□ 1.36
PDLIM5-205ENST00000380180 AIDAQ96BJ3 306 aa23.55■■□□□ 1.36
PDLIM5-205ENST00000380180 STRBPQ96SI9 672 aaKnown RBP23.55■■□□□ 1.36
PDLIM5-205ENST00000380180 LRP2BPQ9P2M1 347 aa23.55■■□□□ 1.36
PDLIM5-205ENST00000380180 WDR33Q9C0J8 1336 aaKnown RBP23.55■■□□□ 1.36
PDLIM5-205ENST00000380180 PLSCR1O15162 318 aa23.54■■□□□ 1.36
PDLIM5-205ENST00000380180 HMGB2P26583 209 aaKnown RBP23.54■■□□□ 1.36
PDLIM5-205ENST00000380180 STK3Q13188 491 aa23.54■■□□□ 1.36
PDLIM5-205ENST00000380180 CHAMP1Q96JM3 812 aa23.54■■□□□ 1.36
PDLIM5-205ENST00000380180 ZNF213O14771 459 aa23.54■■□□□ 1.36
PDLIM5-205ENST00000380180 APBA3O96018 575 aa23.54■■□□□ 1.36
PDLIM5-205ENST00000380180 APPP05067 770 aa23.54■■□□□ 1.36
PDLIM5-205ENST00000380180 SYT1P21579 422 aa23.54■■□□□ 1.36
PDLIM5-205ENST00000380180 KLRK1P26718 216 aa23.54■■□□□ 1.36
PDLIM5-205ENST00000380180 RXRBP28702 533 aa23.54■■□□□ 1.36
PDLIM5-205ENST00000380180 FGD1P98174 961 aa23.54■■□□□ 1.36
PDLIM5-205ENST00000380180 FBXO33Q7Z6M2 555 aa23.54■■□□□ 1.36
PDLIM5-205ENST00000380180 BRF1Q92994 677 aa23.54■■□□□ 1.36
PDLIM5-205ENST00000380180 GRAPQ13588 217 aa23.53■■□□□ 1.36
PDLIM5-205ENST00000380180 SKOR2Q2VWA4 1001 aaPredicted RBP23.53■■□□□ 1.36
PDLIM5-205ENST00000380180 GRAPLQ8TC17 118 aaPredicted RBP23.53■■□□□ 1.36
PDLIM5-205ENST00000380180 CHD4Q14839 1912 aa23.53■■□□□ 1.36
PDLIM5-205ENST00000380180 COL1A1P02452 1464 aaPredicted RBP23.53■■□□□ 1.36
PDLIM5-205ENST00000380180 STX6O43752 255 aa23.52■■□□□ 1.36
PDLIM5-205ENST00000380180 GZF1Q9H116 711 aaPredicted RBP23.52■■□□□ 1.36
PDLIM5-205ENST00000380180 ABCF2Q9UG63 623 aa23.52■■□□□ 1.36
PDLIM5-205ENST00000380180 MBD4O95243 580 aa23.52■■□□□ 1.36
PDLIM5-205ENST00000380180 ST5P78524 1137 aa23.52■■□□□ 1.36
PDLIM5-205ENST00000380180 CHST3Q7LGC8 479 aa23.52■■□□□ 1.36
PDLIM5-205ENST00000380180 AGXT2Q9BYV1 514 aa23.52■■□□□ 1.36
PDLIM5-205ENST00000380180 DENND2AQ9ULE3 1009 aa23.52■■□□□ 1.36
PDLIM5-205ENST00000380180 ILDR1Q86SU0 546 aaPredicted RBP23.51■■□□□ 1.35
PDLIM5-205ENST00000380180 TFCP2L1Q9NZI6 479 aa23.51■■□□□ 1.35
PDLIM5-205ENST00000380180 DDR1Q08345 913 aa23.5■■□□□ 1.35
PDLIM5-205ENST00000380180 ARMT1Q9H993 441 aa23.5■■□□□ 1.35
PDLIM5-205ENST00000380180 LMBRD1Q9NUN5 540 aa23.5■■□□□ 1.35
PDLIM5-205ENST00000380180 PATL2C9JE40 543 aaKnown RBP23.5■■□□□ 1.35
PDLIM5-205ENST00000380180 ZNF827Q17R98 1081 aa23.5■■□□□ 1.35
PDLIM5-205ENST00000380180 RPGRQ92834 1020 aaKnown RBP23.5■■□□□ 1.35
PDLIM5-205ENST00000380180 GTF3C6Q969F1 213 aa23.5■■□□□ 1.35
PDLIM5-205ENST00000380180 CACNA1SQ13698 1873 aa23.5■■□□□ 1.35
PDLIM5-205ENST00000380180 ZSCAN22P10073 491 aaPredicted RBP23.49■■□□□ 1.35
PDLIM5-205ENST00000380180 HIBADHP31937 336 aaKnown RBP23.49■■□□□ 1.35
PDLIM5-205ENST00000380180 CRY2Q49AN0 593 aa23.49■■□□□ 1.35
PDLIM5-205ENST00000380180 NBPF3Q9H094 633 aa23.49■■□□□ 1.35
PDLIM5-205ENST00000380180 POLRMTO00411 1230 aaKnown RBP23.49■■□□□ 1.35
PDLIM5-205ENST00000380180 SEMA3EO15041 775 aa23.49■■□□□ 1.35
PDLIM5-205ENST00000380180 APOBRQ0VD83 1088 aa23.49■■□□□ 1.35
PDLIM5-205ENST00000380180 ALX1Q15699 326 aa23.49■■□□□ 1.35
PDLIM5-205ENST00000380180 NCOA7Q8NI08 942 aa23.49■■□□□ 1.35
PDLIM5-205ENST00000380180 RAI14Q9P0K7 980 aa23.49■■□□□ 1.35
PDLIM5-205ENST00000380180 PRPF40AO75400 957 aaKnown RBP23.48■■□□□ 1.35
PDLIM5-205ENST00000380180 CYP7A1P22680 504 aa23.48■■□□□ 1.35
PDLIM5-205ENST00000380180 SLC51AQ86UW1 340 aa23.48■■□□□ 1.35
PDLIM5-205ENST00000380180 TXNRD3Q86VQ6 643 aa23.48■■□□□ 1.35
PDLIM5-205ENST00000380180 IFNL3Q8IZI9 196 aa23.48■■□□□ 1.35
PDLIM5-205ENST00000380180 AKT1S1Q96B36 256 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms