RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SNAP23O00161 211 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 CTDNEP1O95476 244 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 PDCP20941 246 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 CLCN1P35523 988 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 ATP6V1AP38606 617 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 CCT2P78371 535 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 CCDC183Q5T5S1 534 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 SUSD4Q5VX71 490 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 RGS22Q8NE09 1264 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 PDLIM2Q96JY6 352 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 GPHNQ9NQX3 736 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 FGAP02671 866 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 CRKLP46109 303 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 RBM10P98175 930 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 ITPK1Q13572 414 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 TICAM2Q86XR7 235 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 AGXT2Q9BYV1 514 aa9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 NCOA5Q9HCD5 579 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-204ENST00000380176 PFKFB2O60825 505 aa9.41□□□□□ -0.9
PDLIM5-204ENST00000380176 PDE8BO95263 885 aa9.41□□□□□ -0.9
PDLIM5-204ENST00000380176 HMGB1P09429 215 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-204ENST00000380176 C1QBPQ07021 282 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-204ENST00000380176 PHKA1P46020 1223 aa9.41□□□□□ -0.9
PDLIM5-204ENST00000380176 KRT85P78386 507 aa9.41□□□□□ -0.9
PDLIM5-204ENST00000380176 GIMAP6Q6P9H5 292 aa9.41□□□□□ -0.9
PDLIM5-204ENST00000380176 NSUN7Q8NE18 718 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-204ENST00000380176 SMARCC2Q8TAQ2 1214 aa9.41□□□□□ -0.9
PDLIM5-204ENST00000380176 APPBP2Q92624 585 aa9.41□□□□□ -0.9
PDLIM5-204ENST00000380176 PIH1D3Q9NQM4 214 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-204ENST00000380176 SEC31BQ9NQW1 1179 aa9.41□□□□□ -0.9
PDLIM5-204ENST00000380176 CCDC87Q9NVE4 849 aa9.41□□□□□ -0.9
PDLIM5-204ENST00000380176 LTBP4Q8N2S1 1624 aa9.41□□□□□ -0.9
PDLIM5-204ENST00000380176 LOC102724428A0A0B4J2F2 783 aa9.4□□□□□ -0.9
PDLIM5-204ENST00000380176 GPAA1O43292 621 aa9.4□□□□□ -0.9
PDLIM5-204ENST00000380176 KCNQ2O43526 872 aa9.4□□□□□ -0.9
PDLIM5-204ENST00000380176 FOSBP53539 338 aa9.4□□□□□ -0.9
PDLIM5-204ENST00000380176 SIK1P57059 783 aa9.4□□□□□ -0.9
PDLIM5-204ENST00000380176 CCDC102BQ68D86 513 aa9.4□□□□□ -0.9
PDLIM5-204ENST00000380176 NAP1L2Q9ULW6 460 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-204ENST00000380176 DDX60Q8IY21 1712 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-204ENST00000380176 PHF14O94880 888 aa9.4□□□□□ -0.9
PDLIM5-204ENST00000380176 ZFYP08048 801 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-204ENST00000380176 NKX2-3Q8TAU0 364 aa9.4□□□□□ -0.9
PDLIM5-204ENST00000380176 CAMTA2O94983 1202 aa9.4□□□□□ -0.91
PDLIM5-204ENST00000380176 LIG1P18858 919 aa9.4□□□□□ -0.91
PDLIM5-204ENST00000380176 PDIA3P30101 505 aaKnown RBP9.4□□□□□ -0.91
PDLIM5-204ENST00000380176 RESTQ13127 1097 aa9.4□□□□□ -0.91
PDLIM5-204ENST00000380176 CSPP1Q1MSJ5 1256 aa9.4□□□□□ -0.91
PDLIM5-204ENST00000380176 DENND2AQ9ULE3 1009 aa9.4□□□□□ -0.91
PDLIM5-204ENST00000380176 MYH15Q9Y2K3 1946 aa9.4□□□□□ -0.91
PDLIM5-204ENST00000380176 COL4A1P02462 1669 aa9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 SPATA31A5Q5VU36 1347 aa9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 SPATA31A7Q8IWB4 1347 aa9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 PTPDC1A2A3K4 754 aa9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 FGFR2P21802 821 aa9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 ADD2P35612 726 aa9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 SLC9C2Q5TAH2 1124 aa9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 CDCA7Q9BWT1 371 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 THRAP3Q9Y2W1 955 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 LRP5O75197 1615 aa9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 ABCC12Q96J65 1359 aa9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 A0A0U1RQG5 324 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 IDH1O75874 414 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 LRRFIP1Q32MZ4 808 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 FAM184AQ8NB25 1140 aa9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 LEO1Q8WVC0 666 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 ZNF512BQ96KM6 892 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 FUCA2Q9BTY2 467 aa9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 TAF1P21675 1872 aa9.39□□□□□ -0.91
PDLIM5-204ENST00000380176 ELP1O95163 1332 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 RREB1Q92766 1687 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 H3BQV1 296 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 KCNQ4P56696 695 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 IMMTQ16891 758 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 IFFO2Q5TF58 517 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 SPATA32Q96LK8 384 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 NBPF3Q9H094 633 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 WWC3Q9ULE0 1092 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 ARAP2Q8WZ64 1704 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 SALL1Q9NSC2 1324 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 ARID4AP29374 1257 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 ANTXR2P58335 489 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 PIP4K2BP78356 416 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 PUM3Q15397 648 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 LPIN2Q92539 896 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 PGBD1Q96JS3 809 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 LLPHQ9BRT6 129 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 UTP14AQ9BVJ6 771 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 CTNNA3Q9UI47 895 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 ZNF532Q9HCE3 1301 aa9.38□□□□□ -0.91
PDLIM5-204ENST00000380176 GUCY1B3Q02153 619 aa9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 CAMK4Q16566 473 aa9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 SMIM5Q71RC9 77 aa9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 ZSCAN30Q86W11 494 aa9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 RAB11FIP4Q86YS3 637 aa9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 MB21D2Q8IYB1 491 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 ZNF274Q96GC6 653 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 FTOQ9C0B1 505 aaKnown RBP eCLIP9.37□□□□□ -0.91
PDLIM5-204ENST00000380176 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms