RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 PDCP20941 246 aa17.56■□□□□ 0.4
PRNP-201ENST00000379440 ADD2P35612 726 aa17.56■□□□□ 0.4
PRNP-201ENST00000379440 VPS72Q15906 364 aa17.56■□□□□ 0.4
PRNP-201ENST00000379440 DDX11Q96FC9 970 aa17.56■□□□□ 0.4
PRNP-201ENST00000379440 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.56■□□□□ 0.4
PRNP-201ENST00000379440 RREB1Q92766 1687 aa17.56■□□□□ 0.4
PRNP-201ENST00000379440 ARID4AP29374 1257 aaPredicted RBP17.56■□□□□ 0.4
PRNP-201ENST00000379440 CCDC152Q4G0S7 254 aa17.56■□□□□ 0.4
PRNP-201ENST00000379440 CCT2P78371 535 aaKnown RBP17.55■□□□□ 0.4
PRNP-201ENST00000379440 FAM182BQ5T319 152 aa17.55■□□□□ 0.4
PRNP-201ENST00000379440 CTNNA3Q9UI47 895 aa17.55■□□□□ 0.4
PRNP-201ENST00000379440 LRP5O75197 1615 aa17.55■□□□□ 0.4
PRNP-201ENST00000379440 TTF1Q15361 905 aaPredicted RBP17.55■□□□□ 0.4
PRNP-201ENST00000379440 IMMTQ16891 758 aaKnown RBP17.55■□□□□ 0.4
PRNP-201ENST00000379440 AGXT2Q9BYV1 514 aa17.55■□□□□ 0.4
PRNP-201ENST00000379440 GPHNQ9NQX3 736 aaPredicted RBP17.55■□□□□ 0.4
PRNP-201ENST00000379440 WWC3Q9ULE0 1092 aa17.55■□□□□ 0.4
PRNP-201ENST00000379440 MYO5AQ9Y4I1 1855 aaKnown RBP17.54■□□□□ 0.4
PRNP-201ENST00000379440 DDX60Q8IY21 1712 aaKnown RBP17.54■□□□□ 0.4
PRNP-201ENST00000379440 PFKFB2O60825 505 aa17.54■□□□□ 0.4
PRNP-201ENST00000379440 SLC5A1P13866 664 aa17.54■□□□□ 0.4
PRNP-201ENST00000379440 UBE2HP62256 183 aa17.54■□□□□ 0.4
PRNP-201ENST00000379440 PPFIA3O75145 1194 aa17.54■□□□□ 0.4
PRNP-201ENST00000379440 UQCRFS1P1P0C7P4 283 aa17.54■□□□□ 0.4
PRNP-201ENST00000379440 ZSCAN25Q6NSZ9 544 aa17.54■□□□□ 0.4
PRNP-201ENST00000379440 BICDL1Q6ZP65 573 aa17.54■□□□□ 0.4
PRNP-201ENST00000379440 ZNF652Q9Y2D9 606 aa17.54■□□□□ 0.4
PRNP-201ENST00000379440 ZNF532Q9HCE3 1301 aa17.53■□□□□ 0.4
PRNP-201ENST00000379440 IGHMBP2P38935 993 aaKnown RBP17.53■□□□□ 0.4
PRNP-201ENST00000379440 SYAP1Q96A49 352 aaPredicted RBP17.53■□□□□ 0.4
PRNP-201ENST00000379440 NCOA5Q9HCD5 579 aaKnown RBP17.53■□□□□ 0.4
PRNP-201ENST00000379440 MYH7P12883 1935 aa17.53■□□□□ 0.4
PRNP-201ENST00000379440 CTDNEP1O95476 244 aa17.53■□□□□ 0.4
PRNP-201ENST00000379440 RASGRF1Q13972 1273 aa17.53■□□□□ 0.4
PRNP-201ENST00000379440 ERFEQ4G0M1 354 aa17.53■□□□□ 0.4
PRNP-201ENST00000379440 C3orf67Q6ZVT6 689 aa17.53■□□□□ 0.4
PRNP-201ENST00000379440 SPATA5Q8NB90 893 aa17.53■□□□□ 0.4
PRNP-201ENST00000379440 PDE6AP16499 860 aa17.52■□□□□ 0.4
PRNP-201ENST00000379440 BCAMP50895 628 aa17.52■□□□□ 0.4
PRNP-201ENST00000379440 CICQ96RK0 1608 aaPredicted RBP17.52■□□□□ 0.4
PRNP-201ENST00000379440 COL5A3P25940 1745 aaPredicted RBP17.52■□□□□ 0.4
PRNP-201ENST00000379440 COL4A1P02462 1669 aa17.52■□□□□ 0.39
PRNP-201ENST00000379440 UBE3CQ15386 1083 aa17.52■□□□□ 0.39
PRNP-201ENST00000379440 NSUN7Q8NE18 718 aaKnown RBP17.52■□□□□ 0.39
PRNP-201ENST00000379440 SMARCC2Q8TAQ2 1214 aa17.52■□□□□ 0.39
PRNP-201ENST00000379440 ZNF213O14771 459 aa17.51■□□□□ 0.39
PRNP-201ENST00000379440 PDIA3P30101 505 aaKnown RBP17.51■□□□□ 0.39
PRNP-201ENST00000379440 CHRNDQ07001 517 aa17.51■□□□□ 0.39
PRNP-201ENST00000379440 CLEC4GQ6UXB4 293 aa17.51■□□□□ 0.39
PRNP-201ENST00000379440 TTC6Q86TZ1 520 aa17.51■□□□□ 0.39
PRNP-201ENST00000379440 TFIP11Q9UBB9 837 aaKnown RBP17.51■□□□□ 0.39
PRNP-201ENST00000379440 TCRBV5S4A2TA0A5A2 114 aa17.51■□□□□ 0.39
PRNP-201ENST00000379440 APPP05067 770 aa17.51■□□□□ 0.39
PRNP-201ENST00000379440 FOSBP53539 338 aa17.51■□□□□ 0.39
PRNP-201ENST00000379440 FNBP4Q8N3X1 1017 aaPredicted RBP17.51■□□□□ 0.39
PRNP-201ENST00000379440 FAM184AQ8NB25 1140 aa17.51■□□□□ 0.39
PRNP-201ENST00000379440 RNF214Q8ND24 703 aa17.51■□□□□ 0.39
PRNP-201ENST00000379440 USP21Q9UK80 565 aa17.51■□□□□ 0.39
PRNP-201ENST00000379440 DENND2AQ9ULE3 1009 aa17.51■□□□□ 0.39
PRNP-201ENST00000379440 KRT85P78386 507 aa17.5■□□□□ 0.39
PRNP-201ENST00000379440 WTIPA6NIX2 430 aaPredicted RBP17.5■□□□□ 0.39
PRNP-201ENST00000379440 CSPP1Q1MSJ5 1256 aa17.5■□□□□ 0.39
PRNP-201ENST00000379440 LLPHQ9BRT6 129 aaKnown RBP17.5■□□□□ 0.39
PRNP-201ENST00000379440 NBPF3Q9H094 633 aa17.5■□□□□ 0.39
PRNP-201ENST00000379440 PTPDC1A2A3K4 754 aa17.49■□□□□ 0.39
PRNP-201ENST00000379440 TBC1D9BQ66K14 1250 aa17.49■□□□□ 0.39
PRNP-201ENST00000379440 MB21D2Q8IYB1 491 aaPredicted RBP17.49■□□□□ 0.39
PRNP-201ENST00000379440 NKX2-3Q8TAU0 364 aa17.49■□□□□ 0.39
PRNP-201ENST00000379440 BCL2L12Q9HB09 334 aa17.49■□□□□ 0.39
PRNP-201ENST00000379440 RTL9Q8NET4 1388 aa17.49■□□□□ 0.39
PRNP-201ENST00000379440 H3BQV1 296 aa17.49■□□□□ 0.39
PRNP-201ENST00000379440 PRC1O43663 620 aa17.49■□□□□ 0.39
PRNP-201ENST00000379440 ANTXR2P58335 489 aa17.49■□□□□ 0.39
PRNP-201ENST00000379440 CCDC183Q5T5S1 534 aa17.49■□□□□ 0.39
PRNP-201ENST00000379440 IFFO2Q5TF58 517 aa17.49■□□□□ 0.39
PRNP-201ENST00000379440 MAGEB6Q8N7X4 407 aa17.49■□□□□ 0.39
PRNP-201ENST00000379440 ZNF274Q96GC6 653 aaPredicted RBP17.49■□□□□ 0.39
PRNP-201ENST00000379440 NCOA7Q8NI08 942 aa17.48■□□□□ 0.39
PRNP-201ENST00000379440 ANP32BQ92688 251 aaKnown RBP17.48■□□□□ 0.39
PRNP-201ENST00000379440 TSPY26PQ9H489 355 aa17.48■□□□□ 0.39
PRNP-201ENST00000379440 SRP68Q9UHB9 627 aaKnown RBP17.48■□□□□ 0.39
PRNP-201ENST00000379440 IQSEC3Q9UPP2 1182 aaPredicted RBP17.48■□□□□ 0.39
PRNP-201ENST00000379440 ATRNO75882 1429 aa17.48■□□□□ 0.39
PRNP-201ENST00000379440 TPM2P07951 284 aa17.48■□□□□ 0.39
PRNP-201ENST00000379440 MCM5P33992 734 aa17.48■□□□□ 0.39
PRNP-201ENST00000379440 CCDC173Q0VFZ6 552 aa17.48■□□□□ 0.39
PRNP-201ENST00000379440 AIDAQ96BJ3 306 aa17.48■□□□□ 0.39
PRNP-201ENST00000379440 STRBPQ96SI9 672 aaKnown RBP17.48■□□□□ 0.39
PRNP-201ENST00000379440 ARAP2Q8WZ64 1704 aa17.48■□□□□ 0.39
PRNP-201ENST00000379440 BCORQ6W2J9 1755 aa17.47■□□□□ 0.39
PRNP-201ENST00000379440 CNTNAP4Q9C0A0 1308 aa17.47■□□□□ 0.39
PRNP-201ENST00000379440 RESTQ13127 1097 aa17.47■□□□□ 0.39
PRNP-201ENST00000379440 RALYLQ86SE5 291 aaKnown RBP17.47■□□□□ 0.39
PRNP-201ENST00000379440 RAB11FIP4Q86YS3 637 aa17.47■□□□□ 0.39
PRNP-201ENST00000379440 PPP1R9BQ96SB3 815 aa17.47■□□□□ 0.39
PRNP-201ENST00000379440 PHF14O94880 888 aa17.47■□□□□ 0.39
PRNP-201ENST00000379440 TBC1D10CQ8IV04 446 aa17.47■□□□□ 0.39
PRNP-201ENST00000379440 FBXL16Q8N461 479 aa17.47■□□□□ 0.39
PRNP-201ENST00000379440 CDC5LQ99459 802 aaKnown RBP17.47■□□□□ 0.39
PRNP-201ENST00000379440 MAP3K12Q12852 859 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms