RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 ADGRL1O94910 1474 aa12.05□□□□□ -0.48
ARHGEF39-201ENST00000378387 VSNL1P62760 191 aa12.04□□□□□ -0.48
ARHGEF39-201ENST00000378387 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF39-201ENST00000378387 TTC37Q6PGP7 1564 aa12.04□□□□□ -0.48
ARHGEF39-201ENST00000378387 SF3A3Q12874 501 aaKnown RBP eCLIP12.04□□□□□ -0.48
ARHGEF39-201ENST00000378387 NECTIN1Q15223 517 aa12.04□□□□□ -0.48
ARHGEF39-201ENST00000378387 MAP9Q49MG5 647 aa12.04□□□□□ -0.48
ARHGEF39-201ENST00000378387 PLCD4Q9BRC7 762 aa12.04□□□□□ -0.48
ARHGEF39-201ENST00000378387 VWA3AA6NCI4 1184 aa12.04□□□□□ -0.48
ARHGEF39-201ENST00000378387 STIM1Q13586 685 aa12.04□□□□□ -0.48
ARHGEF39-201ENST00000378387 ZNF827Q17R98 1081 aa12.04□□□□□ -0.48
ARHGEF39-201ENST00000378387 TRIM65Q6PJ69 517 aa12.04□□□□□ -0.48
ARHGEF39-201ENST00000378387 ATRIPQ8WXE1 791 aa12.04□□□□□ -0.48
ARHGEF39-201ENST00000378387 RCOR1Q9UKL0 485 aa12.04□□□□□ -0.48
ARHGEF39-201ENST00000378387 MRFAP1Q9Y605 127 aa12.04□□□□□ -0.48
ARHGEF39-201ENST00000378387 CLIC4Q9Y696 253 aa12.04□□□□□ -0.48
ARHGEF39-201ENST00000378387 ATP10AO60312 1499 aa12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 HAND2P61296 217 aa12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 PSME1Q06323 249 aa12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 EIF4A2Q14240 407 aaKnown RBP12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 N4BP2L2Q92802 583 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 SOWAHDA6NJG2 315 aa12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 HNRNPH1P31943 449 aaKnown RBP12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 GBP2P32456 591 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 GNGT1P63211 74 aa12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 MAP3K9P80192 1104 aa12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 SCRN1Q12765 414 aa12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 PNKPQ96T60 521 aa12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 CDC5LQ99459 802 aaKnown RBP12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 GJB4Q9NTQ9 266 aa12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 PEX19P40855 299 aa12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 ATP1A2P50993 1020 aa12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 DNA2P51530 1060 aa12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 TOB2Q14106 344 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 DDX46Q7L014 1031 aaKnown RBP12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 KLHDC4Q8TBB5 520 aa12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 PCMTD1Q96MG8 357 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 PSD3Q9NYI0 1048 aa12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 CDC42BPAQ5VT25 1732 aa12.03□□□□□ -0.48
ARHGEF39-201ENST00000378387 IPO7O95373 1038 aaKnown RBP12.02□□□□□ -0.48
ARHGEF39-201ENST00000378387 RPSAP08865 295 aaKnown RBP12.02□□□□□ -0.48
ARHGEF39-201ENST00000378387 SCP2P22307 547 aa12.02□□□□□ -0.48
ARHGEF39-201ENST00000378387 ACTN3Q08043 901 aaPredicted RBP12.02□□□□□ -0.48
ARHGEF39-201ENST00000378387 FILIP1LQ4L180 1135 aa12.02□□□□□ -0.48
ARHGEF39-201ENST00000378387 GSPT2Q8IYD1 628 aaKnown RBP12.02□□□□□ -0.48
ARHGEF39-201ENST00000378387 CDC23Q9UJX2 597 aa12.02□□□□□ -0.48
ARHGEF39-201ENST00000378387 NFE2L3Q9Y4A8 694 aa12.02□□□□□ -0.48
ARHGEF39-201ENST00000378387 ENC1O14682 589 aa12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 CLNS1AP54105 237 aaKnown RBP12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 MRPS25P82663 173 aaKnown RBP12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 SARNPP82979 210 aaKnown RBP12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 E2F5Q15329 346 aa12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 MTHFSDQ2M296 383 aaKnown RBP12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 NCAPH2Q6IBW4 605 aa12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 RBM43Q6ZSC3 357 aaKnown RBP12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 ZNF589Q86UQ0 364 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 SLC35F6Q8N357 371 aa12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 SSH3Q8TE77 659 aa12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 NUP88Q99567 741 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 PSEN1P49768 467 aa12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 TRIM29Q14134 588 aa12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 IGSF22Q8N9C0 903 aa12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 KCNG4Q8TDN1 519 aa12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 DUOX2Q9NRD8 1548 aa12.02□□□□□ -0.49
ARHGEF39-201ENST00000378387 SBNO2Q9Y2G9 1366 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 CUTAO60888 179 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 BIRC2Q13490 618 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 PLEKHO1Q53GL0 409 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 ADALQ6DHV7 355 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 MAP4K1Q92918 833 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 TTC21BQ7Z4L5 1316 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 ABCA8O94911 1581 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 PIP4K2BP78356 416 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 CCDC102BQ68D86 513 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 KIRREL3Q8IZU9 778 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 CCDC82Q8N4S0 544 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 JADE2Q9NQC1 790 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 ARHGEF40Q8TER5 1519 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 CROCC2H7BZ55 1655 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 PFKFB1P16118 471 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 WASHC4Q2M389 1173 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 BEND6Q5SZJ8 279 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 TXNDC2Q86VQ3 553 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 KCNG1Q9UIX4 513 aa12.01□□□□□ -0.49
ARHGEF39-201ENST00000378387 MADDQ8WXG6 1647 aa12□□□□□ -0.49
ARHGEF39-201ENST00000378387 CCDC196A0A1B0GTZ2 297 aa12□□□□□ -0.49
ARHGEF39-201ENST00000378387 AKR1B15C9JRZ8 316 aaPredicted RBP12□□□□□ -0.49
ARHGEF39-201ENST00000378387 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
ARHGEF39-201ENST00000378387 NAP1L1P55209 391 aaKnown RBP12□□□□□ -0.49
ARHGEF39-201ENST00000378387 KCTD16Q68DU8 428 aa12□□□□□ -0.49
ARHGEF39-201ENST00000378387 SPECC1LQ69YQ0 1117 aa12□□□□□ -0.49
ARHGEF39-201ENST00000378387 JMYQ8N9B5 988 aa12□□□□□ -0.49
ARHGEF39-201ENST00000378387 ATG3Q9NT62 314 aa12□□□□□ -0.49
ARHGEF39-201ENST00000378387 MAST1Q9Y2H9 1570 aa12□□□□□ -0.49
ARHGEF39-201ENST00000378387 LAMC1P11047 1609 aa12□□□□□ -0.49
ARHGEF39-201ENST00000378387 TRDNQ13061 729 aa12□□□□□ -0.49
ARHGEF39-201ENST00000378387 CCDC114Q96M63 670 aa12□□□□□ -0.49
ARHGEF39-201ENST00000378387 NAPGQ99747 312 aaPredicted RBP12□□□□□ -0.49
ARHGEF39-201ENST00000378387 EHD4Q9H223 541 aa12□□□□□ -0.49
ARHGEF39-201ENST00000378387 VEZTQ9HBM0 779 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms