RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 GOLGA1Q92805 767 aa15.96■□□□□ 0.15
TRIM13-202ENST00000378182 CCNL1Q9UK58 526 aaPredicted RBP15.96■□□□□ 0.15
TRIM13-202ENST00000378182 H0YIN7 160 aa15.96■□□□□ 0.14
TRIM13-202ENST00000378182 APBA3O96018 575 aa15.96■□□□□ 0.14
TRIM13-202ENST00000378182 CNBD1Q8NA66 436 aa15.96■□□□□ 0.14
TRIM13-202ENST00000378182 BACH2Q9BYV9 841 aa15.96■□□□□ 0.14
TRIM13-202ENST00000378182 ZBTB24O43167 697 aaPredicted RBP15.95■□□□□ 0.14
TRIM13-202ENST00000378182 BRDTQ58F21 947 aaPredicted RBP15.95■□□□□ 0.14
TRIM13-202ENST00000378182 CPXCR1Q8N123 301 aa15.95■□□□□ 0.14
TRIM13-202ENST00000378182 ABCC5O15440 1437 aa15.95■□□□□ 0.14
TRIM13-202ENST00000378182 TTC21BQ7Z4L5 1316 aa15.95■□□□□ 0.14
TRIM13-202ENST00000378182 CCDC141Q6ZP82 1450 aa15.95■□□□□ 0.14
TRIM13-202ENST00000378182 GIMAP6Q6P9H5 292 aa15.95■□□□□ 0.14
TRIM13-202ENST00000378182 PAG1Q9NWQ8 432 aa15.95■□□□□ 0.14
TRIM13-202ENST00000378182 PARP1P09874 1014 aaKnown RBP15.95■□□□□ 0.14
TRIM13-202ENST00000378182 GNG11P61952 73 aa15.95■□□□□ 0.14
TRIM13-202ENST00000378182 CFAP157Q5JU67 520 aa15.95■□□□□ 0.14
TRIM13-202ENST00000378182 SMCR8Q8TEV9 937 aaPredicted RBP15.95■□□□□ 0.14
TRIM13-202ENST00000378182 CFAP57Q96MR6 1250 aa15.95■□□□□ 0.14
TRIM13-202ENST00000378182 NPHP3Q7Z494 1330 aa15.95■□□□□ 0.14
TRIM13-202ENST00000378182 M0QZ92 97 aa15.94■□□□□ 0.14
TRIM13-202ENST00000378182 ARHGAP27Q6ZUM4 889 aa15.94■□□□□ 0.14
TRIM13-202ENST00000378182 NOS1P29475 1434 aa15.94■□□□□ 0.14
TRIM13-202ENST00000378182 PDIA4P13667 645 aaKnown RBP15.94■□□□□ 0.14
TRIM13-202ENST00000378182 STX17P56962 302 aa15.94■□□□□ 0.14
TRIM13-202ENST00000378182 PPP1R7Q15435 360 aa15.94■□□□□ 0.14
TRIM13-202ENST00000378182 MCMDC2Q4G0Z9 681 aa15.94■□□□□ 0.14
TRIM13-202ENST00000378182 CCNT1O60563 726 aaKnown RBP15.94■□□□□ 0.14
TRIM13-202ENST00000378182 ADCY5O95622 1261 aa15.94■□□□□ 0.14
TRIM13-202ENST00000378182 CUL4BQ13620 913 aa15.94■□□□□ 0.14
TRIM13-202ENST00000378182 MSANTD4Q8NCY6 345 aa15.94■□□□□ 0.14
TRIM13-202ENST00000378182 TROQ12816 1431 aaPredicted RBP15.94■□□□□ 0.14
TRIM13-202ENST00000378182 CCDC14Q49A88 953 aa15.94■□□□□ 0.14
TRIM13-202ENST00000378182 TEX11Q8IYF3 940 aa15.94■□□□□ 0.14
TRIM13-202ENST00000378182 KRT79Q5XKE5 535 aa15.94■□□□□ 0.14
TRIM13-202ENST00000378182 SLC8A3P57103 927 aa15.94■□□□□ 0.14
TRIM13-202ENST00000378182 IFRD2Q12894 506 aaPredicted RBP15.94■□□□□ 0.14
TRIM13-202ENST00000378182 TBC1D9Q6ZT07 1266 aa15.94■□□□□ 0.14
TRIM13-202ENST00000378182 NKTRP30414 1462 aaKnown RBP15.93■□□□□ 0.14
TRIM13-202ENST00000378182 SATB1Q01826 763 aa15.93■□□□□ 0.14
TRIM13-202ENST00000378182 PAGR1Q9BTK6 254 aa15.93■□□□□ 0.14
TRIM13-202ENST00000378182 BCS1LQ9Y276 419 aa15.93■□□□□ 0.14
TRIM13-202ENST00000378182 FRMD4BQ9Y2L6 1034 aa15.93■□□□□ 0.14
TRIM13-202ENST00000378182 KRT19P08727 400 aa15.93■□□□□ 0.14
TRIM13-202ENST00000378182 GNAQP50148 359 aa15.93■□□□□ 0.14
TRIM13-202ENST00000378182 GRM8O00222 908 aa15.93■□□□□ 0.14
TRIM13-202ENST00000378182 ATP6V0A2Q9Y487 856 aa15.93■□□□□ 0.14
TRIM13-202ENST00000378182 TRIM27P14373 513 aa15.93■□□□□ 0.14
TRIM13-202ENST00000378182 UBXN1Q04323 297 aa15.93■□□□□ 0.14
TRIM13-202ENST00000378182 WDR44Q5JSH3 913 aa15.93■□□□□ 0.14
TRIM13-202ENST00000378182 ARHGEF10LQ9HCE6 1279 aa15.93■□□□□ 0.14
TRIM13-202ENST00000378182 TRPC3Q13507 836 aa15.93■□□□□ 0.14
TRIM13-202ENST00000378182 PLEKHH1Q9ULM0 1364 aa15.93■□□□□ 0.14
TRIM13-202ENST00000378182 STRN3Q13033 797 aa15.92■□□□□ 0.14
TRIM13-202ENST00000378182 ANAPC4Q9UJX5 808 aa15.92■□□□□ 0.14
TRIM13-202ENST00000378182 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.92■□□□□ 0.14
TRIM13-202ENST00000378182 KCNK9Q9NPC2 374 aa15.92■□□□□ 0.14
TRIM13-202ENST00000378182 PLCG2P16885 1265 aa15.92■□□□□ 0.14
TRIM13-202ENST00000378182 CGNQ9P2M7 1197 aaKnown RBP15.92■□□□□ 0.14
TRIM13-202ENST00000378182 LETM2Q2VYF4 491 aa15.92■□□□□ 0.14
TRIM13-202ENST00000378182 GADL1Q6ZQY3 521 aa15.92■□□□□ 0.14
TRIM13-202ENST00000378182 METTL13Q8N6R0 699 aa15.92■□□□□ 0.14
TRIM13-202ENST00000378182 NEK11Q8NG66 645 aa15.92■□□□□ 0.14
TRIM13-202ENST00000378182 TMTC2Q8N394 836 aa15.92■□□□□ 0.14
TRIM13-202ENST00000378182 HS2ST1Q7LGA3 356 aa15.91■□□□□ 0.14
TRIM13-202ENST00000378182 IPO4Q8TEX9 1081 aaKnown RBP15.91■□□□□ 0.14
TRIM13-202ENST00000378182 HCLS1P14317 486 aaPredicted RBP15.91■□□□□ 0.14
TRIM13-202ENST00000378182 CYLC1P35663 651 aaPredicted RBP15.91■□□□□ 0.14
TRIM13-202ENST00000378182 EPSTI1Q96J88 318 aa15.91■□□□□ 0.14
TRIM13-202ENST00000378182 DDX19AQ9NUU7 478 aaKnown RBP15.91■□□□□ 0.14
TRIM13-202ENST00000378182 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
TRIM13-202ENST00000378182 CNPY2Q9Y2B0 182 aa15.91■□□□□ 0.14
TRIM13-202ENST00000378182 PSMA7O14818 248 aa15.91■□□□□ 0.14
TRIM13-202ENST00000378182 GTF2F1P35269 517 aaKnown RBP eCLIP15.91■□□□□ 0.144e-7■■□□□ 11.9
TRIM13-202ENST00000378182 DTHD1Q6ZMT9 781 aa15.91■□□□□ 0.14
TRIM13-202ENST00000378182 C4orf50Q6ZRC1 276 aa15.91■□□□□ 0.14
TRIM13-202ENST00000378182 GSDMBQ8TAX9 411 aa15.91■□□□□ 0.14
TRIM13-202ENST00000378182 KIF2AO00139 706 aaPredicted RBP15.9■□□□□ 0.14
TRIM13-202ENST00000378182 PPARDQ03181 441 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 APOBRQ0VD83 1088 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 TFCP2Q12800 502 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 GPATCH11Q8N954 259 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 ZNF830Q96NB3 372 aaPredicted RBP15.9■□□□□ 0.14
TRIM13-202ENST00000378182 ANKRD2Q9GZV1 360 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 RBM8AQ9Y5S9 174 aaKnown RBP15.9■□□□□ 0.14
TRIM13-202ENST00000378182 TTC36A6NLP5 189 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 KCNA4P22459 653 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 DPP8Q6V1X1 898 aaPredicted RBP15.9■□□□□ 0.14
TRIM13-202ENST00000378182 PRPF31Q8WWY3 499 aaKnown RBP15.9■□□□□ 0.14
TRIM13-202ENST00000378182 RTL9Q8NET4 1388 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 IFT81Q8WYA0 676 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 DDX12PQ92771 950 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 STX10O60499 249 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 ANO6Q4KMQ2 910 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 PPP1R9BQ96SB3 815 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 HMG20BQ9P0W2 317 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 ATP2A1O14983 1001 aa15.9■□□□□ 0.14
TRIM13-202ENST00000378182 GMNNO75496 209 aa15.89■□□□□ 0.14
TRIM13-202ENST00000378182 CWF19L2Q2TBE0 894 aaKnown RBP15.89■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms