RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 FDPSP14324 419 aaKnown RBP18.34■□□□□ 0.53
CKAP4-201ENST00000378026 KARSQ15046 597 aaKnown RBP18.34■□□□□ 0.53
CKAP4-201ENST00000378026 NBPF6Q5VWK0 638 aa18.34■□□□□ 0.53
CKAP4-201ENST00000378026 NBPF4Q96M43 638 aa18.34■□□□□ 0.53
CKAP4-201ENST00000378026 CARMIL3Q8ND23 1372 aa18.34■□□□□ 0.53
CKAP4-201ENST00000378026 HDGFP51858 240 aaKnown RBP18.34■□□□□ 0.53
CKAP4-201ENST00000378026 ADAM21Q9UKJ8 722 aa18.34■□□□□ 0.53
CKAP4-201ENST00000378026 PFKFB1P16118 471 aa18.33■□□□□ 0.53
CKAP4-201ENST00000378026 MCM6Q14566 821 aa18.33■□□□□ 0.53
CKAP4-201ENST00000378026 SYNE3Q6ZMZ3 975 aa18.33■□□□□ 0.53
CKAP4-201ENST00000378026 DESI2Q9BSY9 194 aa18.33■□□□□ 0.53
CKAP4-201ENST00000378026 SETD1BQ9UPS6 1966 aaKnown RBP18.33■□□□□ 0.52
CKAP4-201ENST00000378026 C8orf76Q96K31 380 aa18.33■□□□□ 0.52
CKAP4-201ENST00000378026 NEDD4P46934 1319 aa18.33■□□□□ 0.52
CKAP4-201ENST00000378026 H3BQF6 201 aa18.32■□□□□ 0.52
CKAP4-201ENST00000378026 TUBB4AP04350 444 aa18.32■□□□□ 0.52
CKAP4-201ENST00000378026 TPM1P09493 284 aa18.32■□□□□ 0.52
CKAP4-201ENST00000378026 ADKP55263 362 aaKnown RBP18.32■□□□□ 0.52
CKAP4-201ENST00000378026 TTLL5Q6EMB2 1281 aa18.32■□□□□ 0.52
CKAP4-201ENST00000378026 HSD3B7Q9H2F3 369 aa18.32■□□□□ 0.52
CKAP4-201ENST00000378026 ZSCAN12O43309 604 aa18.32■□□□□ 0.52
CKAP4-201ENST00000378026 KCNJ6P48051 423 aa18.32■□□□□ 0.52
CKAP4-201ENST00000378026 PNOCQ13519 176 aa18.32■□□□□ 0.52
CKAP4-201ENST00000378026 TNNI3KQ59H18 835 aa18.32■□□□□ 0.52
CKAP4-201ENST00000378026 ATL3Q6DD88 541 aa18.32■□□□□ 0.52
CKAP4-201ENST00000378026 LRRC59Q96AG4 307 aaKnown RBP18.32■□□□□ 0.52
CKAP4-201ENST00000378026 AK7Q96M32 723 aa18.32■□□□□ 0.52
CKAP4-201ENST00000378026 BPIFA3Q9BQP9 254 aa18.32■□□□□ 0.52
CKAP4-201ENST00000378026 IRX2Q9BZI1 471 aaPredicted RBP18.32■□□□□ 0.52
CKAP4-201ENST00000378026 FANCLQ9NW38 375 aa18.32■□□□□ 0.52
CKAP4-201ENST00000378026 FPGT-TNNI3KV9GXZ4 949 aa18.32■□□□□ 0.52
CKAP4-201ENST00000378026 LRRC37A3O60309 1634 aa18.32■□□□□ 0.52
CKAP4-201ENST00000378026 FMN2Q9NZ56 1722 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 A0A1W2PQ27 194 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 A0A1W2PQ64 194 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 A0A1W2PQD8 194 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 E7EWF7 191 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 GOLIM4O00461 696 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 HOXB7P09629 217 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 ATP5JP18859 108 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 PIP4K2AP48426 406 aaPredicted RBP18.31■□□□□ 0.52
CKAP4-201ENST00000378026 PLPPR3Q6T4P5 718 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 GPR161Q8N6U8 529 aaKnown RBP18.31■□□□□ 0.52
CKAP4-201ENST00000378026 NEUROD6Q96NK8 337 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 IGKV5-2P06315 115 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 HAND2P61296 217 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 TOGARAM2Q6ZUX3 1019 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 KCNG4Q8TDN1 519 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 DHX58Q96C10 678 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 FUT8Q9BYC5 575 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 VPS18Q9P253 973 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 JCADQ9P266 1359 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 MUM1L1Q5H9M0 696 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 UBXN6Q9BZV1 441 aa18.31■□□□□ 0.52
CKAP4-201ENST00000378026 PUF60Q9UHX1 559 aaKnown RBP18.31■□□□□ 0.52
CKAP4-201ENST00000378026 N4BP2Q86UW6 1770 aaPredicted RBP18.3■□□□□ 0.52
CKAP4-201ENST00000378026 HMGB1P09429 215 aaKnown RBP18.3■□□□□ 0.52
CKAP4-201ENST00000378026 MYD88Q99836 296 aa18.3■□□□□ 0.52
CKAP4-201ENST00000378026 WDHD1O75717 1129 aaPredicted RBP18.3■□□□□ 0.52
CKAP4-201ENST00000378026 PSME1Q06323 249 aa18.3■□□□□ 0.52
CKAP4-201ENST00000378026 LONRF2Q1L5Z9 754 aa18.3■□□□□ 0.52
CKAP4-201ENST00000378026 MYSM1Q5VVJ2 828 aa18.3■□□□□ 0.52
CKAP4-201ENST00000378026 CCDC12Q8WUD4 166 aaPredicted RBP18.3■□□□□ 0.52
CKAP4-201ENST00000378026 CEMIPQ8WUJ3 1361 aa18.3■□□□□ 0.52
CKAP4-201ENST00000378026 TECPR2O15040 1411 aa18.3■□□□□ 0.52
CKAP4-201ENST00000378026 KIF28PB7ZC32 967 aa18.29■□□□□ 0.52
CKAP4-201ENST00000378026 EXOSC10Q01780 885 aaKnown RBP18.29■□□□□ 0.52
CKAP4-201ENST00000378026 MYL5Q02045 173 aa18.29■□□□□ 0.52
CKAP4-201ENST00000378026 BAG1Q99933 345 aaPredicted RBP18.29■□□□□ 0.52
CKAP4-201ENST00000378026 CWC15Q9P013 229 aaKnown RBP18.29■□□□□ 0.52
CKAP4-201ENST00000378026 RICTORQ6R327 1708 aa18.29■□□□□ 0.52
CKAP4-201ENST00000378026 NALCNQ8IZF0 1738 aa18.29■□□□□ 0.52
CKAP4-201ENST00000378026 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.29■□□□□ 0.52
CKAP4-201ENST00000378026 MROH7-TTC4A0A0A0MT08 1334 aa18.29■□□□□ 0.52
CKAP4-201ENST00000378026 SYKP43405 635 aa18.29■□□□□ 0.52
CKAP4-201ENST00000378026 MAP3K9P80192 1104 aa18.29■□□□□ 0.52
CKAP4-201ENST00000378026 VSTM4Q8IW00 320 aa18.29■□□□□ 0.52
CKAP4-201ENST00000378026 PDE11AQ9HCR9 933 aa18.29■□□□□ 0.52
CKAP4-201ENST00000378026 SALL1Q9NSC2 1324 aa18.29■□□□□ 0.52
CKAP4-201ENST00000378026 ANKRD65E5RJM6 399 aa18.29■□□□□ 0.52
CKAP4-201ENST00000378026 CBFA2T2O43439 604 aa18.29■□□□□ 0.52
CKAP4-201ENST00000378026 DDX58O95786 925 aaKnown RBP18.29■□□□□ 0.52
CKAP4-201ENST00000378026 WWC2Q6AWC2 1192 aa18.29■□□□□ 0.52
CKAP4-201ENST00000378026 MPHOSPH8Q99549 860 aa18.29■□□□□ 0.52
CKAP4-201ENST00000378026 ATP8B1O43520 1251 aa18.28■□□□□ 0.52
CKAP4-201ENST00000378026 SKIDA1Q1XH10 827 aa18.28■□□□□ 0.52
CKAP4-201ENST00000378026 STK11IPQ8N1F8 1099 aa18.28■□□□□ 0.52
CKAP4-201ENST00000378026 RRP15Q9Y3B9 282 aaKnown RBP18.28■□□□□ 0.52
CKAP4-201ENST00000378026 MRFAP1Q9Y605 127 aa18.28■□□□□ 0.52
CKAP4-201ENST00000378026 SUGCTQ9HAC7 445 aa18.28■□□□□ 0.52
CKAP4-201ENST00000378026 ARHGAP6O43182 974 aa18.27■□□□□ 0.52
CKAP4-201ENST00000378026 PHACTR2O75167 634 aa18.27■□□□□ 0.52
CKAP4-201ENST00000378026 ANO1Q5XXA6 986 aa18.27■□□□□ 0.52
CKAP4-201ENST00000378026 FBXO18Q8NFZ0 1043 aa18.27■□□□□ 0.52
CKAP4-201ENST00000378026 LZTFL1Q9NQ48 299 aa18.27■□□□□ 0.52
CKAP4-201ENST00000378026 CPLX1O14810 134 aa18.27■□□□□ 0.52
CKAP4-201ENST00000378026 N4BP1O75113 896 aaKnown RBP18.27■□□□□ 0.52
CKAP4-201ENST00000378026 NEXNQ0ZGT2 675 aa18.27■□□□□ 0.52
CKAP4-201ENST00000378026 FOXR1Q6PIV2 292 aa18.27■□□□□ 0.52
CKAP4-201ENST00000378026 GOLGA1Q92805 767 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms