RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 USP17L3A6NCW0 530 aa15.17■□□□□ 0.02
VRK3-202ENST00000377011 USP17L4A6NCW7 530 aa15.17■□□□□ 0.02
VRK3-202ENST00000377011 ZBTB7BO15156 539 aaPredicted RBP15.17■□□□□ 0.02
VRK3-202ENST00000377011 GTF2IP78347 998 aa15.17■□□□□ 0.02
VRK3-202ENST00000377011 METTL24Q5JXM2 366 aa15.17■□□□□ 0.02
VRK3-202ENST00000377011 C15orf52Q6ZUT6 534 aaKnown RBP15.17■□□□□ 0.02
VRK3-202ENST00000377011 USP17L1Q7RTZ2 530 aa15.17■□□□□ 0.02
VRK3-202ENST00000377011 CNTROBQ8N137 903 aa15.17■□□□□ 0.02
VRK3-202ENST00000377011 DNAJC5GQ8N7S2 189 aa15.17■□□□□ 0.02
VRK3-202ENST00000377011 FAM84BQ96KN1 310 aaPredicted RBP15.17■□□□□ 0.02
VRK3-202ENST00000377011 IQSEC3Q9UPP2 1182 aaPredicted RBP15.17■□□□□ 0.02
VRK3-202ENST00000377011 FGFR2P21802 821 aa15.16■□□□□ 0.02
VRK3-202ENST00000377011 GRIK5Q16478 980 aa15.16■□□□□ 0.02
VRK3-202ENST00000377011 PNMA8AQ86V59 439 aaPredicted RBP15.16■□□□□ 0.02
VRK3-202ENST00000377011 DPF2Q92785 391 aa15.16■□□□□ 0.02
VRK3-202ENST00000377011 MROH5Q6ZUA9 1318 aa15.16■□□□□ 0.02
VRK3-202ENST00000377011 SRGAP3O43295 1099 aa15.15■□□□□ 0.02
VRK3-202ENST00000377011 PDE8BO95263 885 aa15.15■□□□□ 0.02
VRK3-202ENST00000377011 TTLL5Q6EMB2 1281 aa15.15■□□□□ 0.02
VRK3-202ENST00000377011 USP50Q70EL3 339 aaPredicted RBP15.15■□□□□ 0.02
VRK3-202ENST00000377011 GLIS2Q9BZE0 524 aaPredicted RBP15.15■□□□□ 0.02
VRK3-202ENST00000377011 AOX1Q06278 1338 aa15.15■□□□□ 0.02
VRK3-202ENST00000377011 GNAI3P08754 354 aa15.14■□□□□ 0.01
VRK3-202ENST00000377011 IL1R1P14778 569 aa15.14■□□□□ 0.01
VRK3-202ENST00000377011 BCAMP50895 628 aa15.14■□□□□ 0.01
VRK3-202ENST00000377011 APLP1P51693 650 aa15.14■□□□□ 0.01
VRK3-202ENST00000377011 NUCB1Q02818 461 aa15.14■□□□□ 0.01
VRK3-202ENST00000377011 MTX1Q13505 466 aa15.14■□□□□ 0.01
VRK3-202ENST00000377011 UBE4AQ14139 1066 aa15.14■□□□□ 0.01
VRK3-202ENST00000377011 ANTXR1Q9H6X2 564 aa15.14■□□□□ 0.01
VRK3-202ENST00000377011 FRAT2O75474 233 aaPredicted RBP15.14■□□□□ 0.01
VRK3-202ENST00000377011 GNAI2P04899 355 aa15.14■□□□□ 0.01
VRK3-202ENST00000377011 ZNF280AP59817 542 aaPredicted RBP15.14■□□□□ 0.01
VRK3-202ENST00000377011 H7C1D1 291 aa15.13■□□□□ 0.01
VRK3-202ENST00000377011 STRIP1Q5VSL9 837 aa15.13■□□□□ 0.01
VRK3-202ENST00000377011 KIAA0825Q8IV33 1275 aa15.13■□□□□ 0.01
VRK3-202ENST00000377011 GCC1Q96CN9 775 aa15.13■□□□□ 0.01
VRK3-202ENST00000377011 COPRSQ9NQ92 184 aa15.13■□□□□ 0.01
VRK3-202ENST00000377011 PGAP2Q9UHJ9 254 aa15.13■□□□□ 0.01
VRK3-202ENST00000377011 COL1A1P02452 1464 aaPredicted RBP15.13■□□□□ 0.01
VRK3-202ENST00000377011 ZNF609O15014 1411 aa15.12■□□□□ 0.01
VRK3-202ENST00000377011 EIF5BO60841 1220 aaKnown RBP15.12■□□□□ 0.01
VRK3-202ENST00000377011 RPS12P25398 132 aaKnown RBP15.12■□□□□ 0.01
VRK3-202ENST00000377011 ADORA1P30542 326 aa15.12■□□□□ 0.01
VRK3-202ENST00000377011 KIF4BQ2VIQ3 1234 aa15.12■□□□□ 0.01
VRK3-202ENST00000377011 FBXO33Q7Z6M2 555 aa15.12■□□□□ 0.01
VRK3-202ENST00000377011 AGBL3Q8NEM8 1001 aa15.12■□□□□ 0.01
VRK3-202ENST00000377011 TDRD7Q8NHU6 1098 aaKnown RBP15.12■□□□□ 0.01
VRK3-202ENST00000377011 ADM5C9JUS6 153 aa15.12■□□□□ 0.01
VRK3-202ENST00000377011 F8W031 263 aaPredicted RBP15.12■□□□□ 0.01
VRK3-202ENST00000377011 USP17L8P0C7I0 530 aa15.12■□□□□ 0.01
VRK3-202ENST00000377011 HIBADHP31937 336 aaKnown RBP15.12■□□□□ 0.01
VRK3-202ENST00000377011 NBPF9Q3BBW0 867 aa15.12■□□□□ 0.01
VRK3-202ENST00000377011 CST9Q5W186 159 aa15.12■□□□□ 0.01
VRK3-202ENST00000377011 TBC1D2Q9BYX2 928 aa15.12■□□□□ 0.01
VRK3-202ENST00000377011 C22orf23Q9BZE7 217 aa15.12■□□□□ 0.01
VRK3-202ENST00000377011 CIAO1O76071 339 aa15.11■□□□□ 0.01
VRK3-202ENST00000377011 SASH1O94885 1247 aa15.11■□□□□ 0.01
VRK3-202ENST00000377011 TFCP2Q12800 502 aa15.11■□□□□ 0.01
VRK3-202ENST00000377011 ZNF804AQ7Z570 1209 aa15.11■□□□□ 0.01
VRK3-202ENST00000377011 MYOZ2Q9NPC6 264 aa15.11■□□□□ 0.01
VRK3-202ENST00000377011 TIMM10P62072 90 aa15.1■□□□□ 0.01
VRK3-202ENST00000377011 SCARF1Q14162 830 aa15.1■□□□□ 0.01
VRK3-202ENST00000377011 POLA2Q14181 598 aa15.1■□□□□ 0.01
VRK3-202ENST00000377011 PUM3Q15397 648 aaKnown RBP15.1■□□□□ 0.01
VRK3-202ENST00000377011 USP48Q86UV5 1035 aa15.1■□□□□ 0.01
VRK3-202ENST00000377011 ATP8B2P98198 1209 aa15.09■□□□□ 0.01
VRK3-202ENST00000377011 BMP2KLQ5H9B9 411 aa15.09■□□□□ 0.01
VRK3-202ENST00000377011 CHD1LQ86WJ1 897 aa15.09■□□□□ 0.01
VRK3-202ENST00000377011 IL27Q8NEV9 243 aa15.09■□□□□ 0.01
VRK3-202ENST00000377011 GGA3Q9NZ52 723 aa15.09■□□□□ 0.01
VRK3-202ENST00000377011 TRPM7Q96QT4 1865 aa15.09■□□□□ 0.01
VRK3-202ENST00000377011 RBM25P49756 843 aaKnown RBP15.09■□□□□ 0.01
VRK3-202ENST00000377011 CHAF1AQ13111 956 aaPredicted RBP15.09■□□□□ 0.01
VRK3-202ENST00000377011 ANGEL2Q5VTE6 544 aaKnown RBP15.09■□□□□ 0.01
VRK3-202ENST00000377011 PRAMEF18Q5VWM3 479 aa15.09■□□□□ 0.01
VRK3-202ENST00000377011 CEP85Q6P2H3 762 aa15.09■□□□□ 0.01
VRK3-202ENST00000377011 SIRT2Q8IXJ6 389 aa15.09■□□□□ 0.01
VRK3-202ENST00000377011 MKRN1Q9UHC7 482 aaKnown RBP15.09■□□□□ 0.01
VRK3-202ENST00000377011 WNT10BO00744 389 aa15.08■□□□□ 0
VRK3-202ENST00000377011 IL15P40933 162 aaPredicted RBP15.08■□□□□ 0
VRK3-202ENST00000377011 PHKA1P46020 1223 aa15.08■□□□□ 0
VRK3-202ENST00000377011 ATP2B3Q16720 1220 aa15.08■□□□□ 0
VRK3-202ENST00000377011 FAM205AQ6ZU69 1335 aa15.08■□□□□ 0
VRK3-202ENST00000377011 SSH3Q8TE77 659 aa15.08■□□□□ 0
VRK3-202ENST00000377011 ARAP2Q8WZ64 1704 aa15.08■□□□□ 0
VRK3-202ENST00000377011 LPIN2Q92539 896 aa15.07■□□□□ 0
VRK3-202ENST00000377011 ZBED3Q96IU2 234 aaPredicted RBP15.07■□□□□ 0
VRK3-202ENST00000377011 CEP126Q9P2H0 1117 aa15.07■□□□□ 0
VRK3-202ENST00000377011 MYH13Q9UKX3 1938 aa15.06■□□□□ 0
VRK3-202ENST00000377011 MFSD14BQ5SR56 506 aa15.06■□□□□ 0
VRK3-202ENST00000377011 ZC3H15Q8WU90 426 aaKnown RBP15.06■□□□□ 0
VRK3-202ENST00000377011 SNX21Q969T3 373 aa15.06■□□□□ 0
VRK3-202ENST00000377011 ZNF408Q9H9D4 720 aa15.06■□□□□ 0
VRK3-202ENST00000377011 CREBZFQ9NS37 354 aa15.06■□□□□ 0
VRK3-202ENST00000377011 TMEM88BA6NKF7 163 aa15.06■□□□□ 0
VRK3-202ENST00000377011 IFIT1P09914 478 aaKnown RBP15.06■□□□□ 0
VRK3-202ENST00000377011 KRT26Q7Z3Y9 468 aa15.06■□□□□ 0
VRK3-202ENST00000377011 KLRG1Q96E93 195 aa15.06■□□□□ 0
VRK3-202ENST00000377011 PRMT6Q96LA8 375 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms