RNA–Protein interactions for RNA: ENST00000376909.6

SSX9-201, Transcript of Protein SSX9, humanhuman

BASIC

Gene SSX9, Length 591 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-201ENST00000376909 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.45□□□□□ -0.9
SSX9-201ENST00000376909 EVI5LQ96CN4 794 aa9.45□□□□□ -0.9
SSX9-201ENST00000376909 HAUS7Q99871 368 aa9.45□□□□□ -0.9
SSX9-201ENST00000376909 H0YIN7 160 aa9.44□□□□□ -0.9
SSX9-201ENST00000376909 UQCRFS1P1P0C7P4 283 aa9.44□□□□□ -0.9
SSX9-201ENST00000376909 SRGNP10124 158 aa9.44□□□□□ -0.9
SSX9-201ENST00000376909 HOXB3P14651 431 aaPredicted RBP9.44□□□□□ -0.9
SSX9-201ENST00000376909 ALDH1B1P30837 517 aa9.44□□□□□ -0.9
SSX9-201ENST00000376909 KCNJ4P48050 445 aa9.44□□□□□ -0.9
SSX9-201ENST00000376909 R3HDM1Q15032 1099 aaKnown RBP9.44□□□□□ -0.9
SSX9-201ENST00000376909 C2CD5Q86YS7 1000 aa9.44□□□□□ -0.9
SSX9-201ENST00000376909 MASTLQ96GX5 879 aa9.44□□□□□ -0.9
SSX9-201ENST00000376909 DNAJC2Q99543 621 aaKnown RBP9.44□□□□□ -0.9
SSX9-201ENST00000376909 UPF2Q9HAU5 1272 aaKnown RBP9.44□□□□□ -0.9
SSX9-201ENST00000376909 NRXN2Q9P2S2 1712 aa9.44□□□□□ -0.9
SSX9-201ENST00000376909 COL4A1P02462 1669 aa9.43□□□□□ -0.9
SSX9-201ENST00000376909 SNAP23O00161 211 aa9.43□□□□□ -0.9
SSX9-201ENST00000376909 PPEF1O14829 653 aaPredicted RBP9.43□□□□□ -0.9
SSX9-201ENST00000376909 ZBTB7AO95365 584 aa9.43□□□□□ -0.9
SSX9-201ENST00000376909 CHMLP26374 656 aa9.43□□□□□ -0.9
SSX9-201ENST00000376909 POLD1P28340 1107 aa9.43□□□□□ -0.9
SSX9-201ENST00000376909 CCDC102BQ68D86 513 aa9.43□□□□□ -0.9
SSX9-201ENST00000376909 STYK1Q6J9G0 422 aa9.43□□□□□ -0.9
SSX9-201ENST00000376909 ZNF622Q969S3 477 aaKnown RBP eCLIP9.43□□□□□ -0.9
SSX9-201ENST00000376909 ZNF512BQ96KM6 892 aaPredicted RBP9.43□□□□□ -0.9
SSX9-201ENST00000376909 MTFR1LQ9H019 292 aa9.43□□□□□ -0.9
SSX9-201ENST00000376909 ANKIB1Q9P2G1 1089 aa9.43□□□□□ -0.9
SSX9-201ENST00000376909 LEMD3Q9Y2U8 911 aa9.43□□□□□ -0.9
SSX9-201ENST00000376909 RBM19Q9Y4C8 960 aaKnown RBP9.43□□□□□ -0.9
SSX9-201ENST00000376909 ZNF804BA4D1E1 1349 aa9.42□□□□□ -0.9
SSX9-201ENST00000376909 XDHP47989 1333 aa9.42□□□□□ -0.9
SSX9-201ENST00000376909 HIP1O00291 1037 aa9.42□□□□□ -0.9
SSX9-201ENST00000376909 PHKA1P46020 1223 aa9.42□□□□□ -0.9
SSX9-201ENST00000376909 MFAP1P55081 439 aaKnown RBP9.42□□□□□ -0.9
SSX9-201ENST00000376909 CAVIN4Q5BKX8 364 aa9.42□□□□□ -0.9
SSX9-201ENST00000376909 SP8Q8IXZ3 490 aa9.42□□□□□ -0.9
SSX9-201ENST00000376909 FSD1Q9BTV5 496 aa9.42□□□□□ -0.9
SSX9-201ENST00000376909 TMX4Q9H1E5 349 aaPredicted RBP9.42□□□□□ -0.9
SSX9-201ENST00000376909 GNL3LQ9NVN8 582 aaKnown RBP9.42□□□□□ -0.9
SSX9-201ENST00000376909 PAG1Q9NWQ8 432 aa9.42□□□□□ -0.9
SSX9-201ENST00000376909 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
SSX9-201ENST00000376909 ATP6V0A2Q9Y487 856 aa9.42□□□□□ -0.9
SSX9-201ENST00000376909 C2orf72A6NCS6 295 aa9.41□□□□□ -0.9
SSX9-201ENST00000376909 GOLIM4O00461 696 aa9.41□□□□□ -0.9
SSX9-201ENST00000376909 ATP2B4P23634 1241 aa9.41□□□□□ -0.9
SSX9-201ENST00000376909 ARID4AP29374 1257 aaPredicted RBP9.41□□□□□ -0.9
SSX9-201ENST00000376909 BCAMP50895 628 aa9.41□□□□□ -0.9
SSX9-201ENST00000376909 GPSM2P81274 684 aa9.41□□□□□ -0.9
SSX9-201ENST00000376909 FKBP4Q02790 459 aaKnown RBP eCLIP9.41□□□□□ -0.9
SSX9-201ENST00000376909 TICAM2Q86XR7 235 aa9.41□□□□□ -0.9
SSX9-201ENST00000376909 VPS37DQ86XT2 251 aa9.41□□□□□ -0.9
SSX9-201ENST00000376909 RUFY2Q8WXA3 655 aa9.41□□□□□ -0.9
SSX9-201ENST00000376909 CNKSR1Q969H4 720 aa9.41□□□□□ -0.9
SSX9-201ENST00000376909 EDC3Q96F86 508 aaKnown RBP9.41□□□□□ -0.9
SSX9-201ENST00000376909 ESYT1Q9BSJ8 1104 aa9.41□□□□□ -0.9
SSX9-201ENST00000376909 GPHNQ9NQX3 736 aaPredicted RBP9.41□□□□□ -0.9
SSX9-201ENST00000376909 SNRKQ9NRH2 765 aa9.41□□□□□ -0.9
SSX9-201ENST00000376909 DIAPH3Q9NSV4 1193 aa9.41□□□□□ -0.9
SSX9-201ENST00000376909 GGA1Q9UJY5 639 aa9.41□□□□□ -0.9
SSX9-201ENST00000376909 NSFL1CQ9UNZ2 370 aaKnown RBP9.41□□□□□ -0.9
SSX9-201ENST00000376909 NDUFB9Q9Y6M9 179 aa9.41□□□□□ -0.9
SSX9-201ENST00000376909 C10orf71Q711Q0 1435 aa9.4□□□□□ -0.9
SSX9-201ENST00000376909 PSDA5PKW4 1024 aaPredicted RBP9.4□□□□□ -0.9
SSX9-201ENST00000376909 WTIPA6NIX2 430 aaPredicted RBP9.4□□□□□ -0.9
SSX9-201ENST00000376909 REC8O95072 547 aa9.4□□□□□ -0.9
SSX9-201ENST00000376909 HOXB1P14653 301 aaPredicted RBP9.4□□□□□ -0.9
SSX9-201ENST00000376909 CHRNA5P30532 468 aa9.4□□□□□ -0.9
SSX9-201ENST00000376909 MCAMP43121 646 aa9.4□□□□□ -0.9
SSX9-201ENST00000376909 ZAP70P43403 619 aa9.4□□□□□ -0.9
SSX9-201ENST00000376909 GYG1P46976 350 aa9.4□□□□□ -0.9
SSX9-201ENST00000376909 SCARF1Q14162 830 aa9.4□□□□□ -0.9
SSX9-201ENST00000376909 TTF1Q15361 905 aaPredicted RBP9.4□□□□□ -0.9
SSX9-201ENST00000376909 LRRFIP1Q32MZ4 808 aaKnown RBP9.4□□□□□ -0.9
SSX9-201ENST00000376909 FBXO33Q7Z6M2 555 aa9.4□□□□□ -0.9
SSX9-201ENST00000376909 KBTBD3Q8NAB2 608 aa9.4□□□□□ -0.9
SSX9-201ENST00000376909 FAM84BQ96KN1 310 aaPredicted RBP9.4□□□□□ -0.9
SSX9-201ENST00000376909 PODXL2Q9NZ53 605 aa9.4□□□□□ -0.9
SSX9-201ENST00000376909 RFX7Q2KHR2 1363 aa9.39□□□□□ -0.91
SSX9-201ENST00000376909 UFL1O94874 794 aa9.39□□□□□ -0.91
SSX9-201ENST00000376909 HIBADHP31937 336 aaKnown RBP9.39□□□□□ -0.91
SSX9-201ENST00000376909 CWC27Q6UX04 472 aaKnown RBP9.39□□□□□ -0.91
SSX9-201ENST00000376909 C15orf52Q6ZUT6 534 aaKnown RBP9.39□□□□□ -0.91
SSX9-201ENST00000376909 ILDR2Q71H61 639 aa9.39□□□□□ -0.91
SSX9-201ENST00000376909 SLC51AQ86UW1 340 aa9.39□□□□□ -0.91
SSX9-201ENST00000376909 SPATA5Q8NB90 893 aa9.39□□□□□ -0.91
SSX9-201ENST00000376909 ANTXR1Q9H6X2 564 aa9.39□□□□□ -0.91
SSX9-201ENST00000376909 HMG20BQ9P0W2 317 aa9.39□□□□□ -0.91
SSX9-201ENST00000376909 ANKRD31Q8N7Z5 1873 aa9.38□□□□□ -0.91
SSX9-201ENST00000376909 C6orf229H3BNL8 230 aa9.38□□□□□ -0.91
SSX9-201ENST00000376909 SEMA3EO15041 775 aa9.38□□□□□ -0.91
SSX9-201ENST00000376909 SGSM2O43147 1006 aa9.38□□□□□ -0.91
SSX9-201ENST00000376909 SLC34A2O95436 690 aa9.38□□□□□ -0.91
SSX9-201ENST00000376909 KLRK1P26718 216 aa9.38□□□□□ -0.91
SSX9-201ENST00000376909 TGFB2P61812 414 aa9.38□□□□□ -0.91
SSX9-201ENST00000376909 NMIQ13287 307 aaPredicted RBP9.38□□□□□ -0.91
SSX9-201ENST00000376909 RASGRF1Q13972 1273 aa9.38□□□□□ -0.91
SSX9-201ENST00000376909 PRPF40BQ6NWY9 871 aaKnown RBP9.38□□□□□ -0.91
SSX9-201ENST00000376909 PI16Q6UXB8 463 aa9.38□□□□□ -0.91
SSX9-201ENST00000376909 ZNF804AQ7Z570 1209 aa9.38□□□□□ -0.91
SSX9-201ENST00000376909 MPNDQ8N594 471 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms