RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 CCDC112Q8NEF3 446 aa15.44■□□□□ 0.06
ACTN1-202ENST00000376839 RTEL1Q9NZ71 1219 aa15.44■□□□□ 0.06
ACTN1-202ENST00000376839 PKD1L3Q7Z443 1732 aa15.44■□□□□ 0.06
ACTN1-202ENST00000376839 POLR3DP05423 398 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-202ENST00000376839 PAXBP1Q9Y5B6 917 aa15.44■□□□□ 0.06
ACTN1-202ENST00000376839 DMTNQ08495 405 aa15.43■□□□□ 0.06
ACTN1-202ENST00000376839 LINC00301Q8NCQ3 95 aa15.43■□□□□ 0.06
ACTN1-202ENST00000376839 SDF4Q9BRK5 362 aa15.43■□□□□ 0.06
ACTN1-202ENST00000376839 NEDD4P46934 1319 aa15.43■□□□□ 0.06
ACTN1-202ENST00000376839 NUP188Q5SRE5 1749 aa15.43■□□□□ 0.06
ACTN1-202ENST00000376839 NWD2Q9ULI1 1742 aa15.43■□□□□ 0.06
ACTN1-202ENST00000376839 EVCP57679 992 aa15.43■□□□□ 0.06
ACTN1-202ENST00000376839 DPCR1Q3MIW9 517 aa15.43■□□□□ 0.06
ACTN1-202ENST00000376839 ADALQ6DHV7 355 aa15.43■□□□□ 0.06
ACTN1-202ENST00000376839 TRMT1Q9NXH9 659 aaKnown RBP15.43■□□□□ 0.06
ACTN1-202ENST00000376839 TMEM94Q12767 1356 aa15.43■□□□□ 0.06
ACTN1-202ENST00000376839 ADAMTSL3P82987 1691 aa15.43■□□□□ 0.06
ACTN1-202ENST00000376839 SCARF1Q14162 830 aa15.42■□□□□ 0.06
ACTN1-202ENST00000376839 WASHC4Q2M389 1173 aa15.42■□□□□ 0.06
ACTN1-202ENST00000376839 NBPF11Q86T75 865 aa15.42■□□□□ 0.06
ACTN1-202ENST00000376839 HPS5Q9UPZ3 1129 aa15.42■□□□□ 0.06
ACTN1-202ENST00000376839 KLF18A0A0U1RQI7 1052 aa15.42■□□□□ 0.06
ACTN1-202ENST00000376839 NEMFO60524 1076 aa15.42■□□□□ 0.06
ACTN1-202ENST00000376839 NYAP1Q6ZVC0 841 aa15.42■□□□□ 0.06
ACTN1-202ENST00000376839 C8orf76Q96K31 380 aa15.42■□□□□ 0.06
ACTN1-202ENST00000376839 GOLGA8BA8MQT2 603 aa15.41■□□□□ 0.06
ACTN1-202ENST00000376839 PRC1O43663 620 aa15.41■□□□□ 0.06
ACTN1-202ENST00000376839 CIAO1O76071 339 aa15.41■□□□□ 0.06
ACTN1-202ENST00000376839 STK38Q15208 465 aa15.41■□□□□ 0.06
ACTN1-202ENST00000376839 SYCP1Q15431 976 aa15.41■□□□□ 0.06
ACTN1-202ENST00000376839 FBXL16Q8N461 479 aa15.41■□□□□ 0.06
ACTN1-202ENST00000376839 CCDC191Q8NCU4 936 aa15.41■□□□□ 0.06
ACTN1-202ENST00000376839 CCDC85AQ96PX6 553 aaPredicted RBP15.41■□□□□ 0.06
ACTN1-202ENST00000376839 A0A1W2PQ27 194 aa15.41■□□□□ 0.06
ACTN1-202ENST00000376839 A0A1W2PQ64 194 aa15.41■□□□□ 0.06
ACTN1-202ENST00000376839 A0A1W2PQD8 194 aa15.41■□□□□ 0.06
ACTN1-202ENST00000376839 FGAP02671 866 aa15.41■□□□□ 0.06
ACTN1-202ENST00000376839 ANTXR2P58335 489 aa15.41■□□□□ 0.06
ACTN1-202ENST00000376839 SF3A1Q15459 793 aaKnown RBP15.41■□□□□ 0.06
ACTN1-202ENST00000376839 PI16Q6UXB8 463 aa15.41■□□□□ 0.06
ACTN1-202ENST00000376839 TICAM2Q86XR7 235 aa15.41■□□□□ 0.06
ACTN1-202ENST00000376839 CEP126Q9P2H0 1117 aa15.41■□□□□ 0.06
ACTN1-202ENST00000376839 ORC3Q9UBD5 711 aaPredicted RBP15.41■□□□□ 0.06
ACTN1-202ENST00000376839 ZHX1Q9UKY1 873 aaPredicted RBP15.41■□□□□ 0.06
ACTN1-202ENST00000376839 KIF28PB7ZC32 967 aa15.4■□□□□ 0.06
ACTN1-202ENST00000376839 PTPN14Q15678 1187 aa15.4■□□□□ 0.06
ACTN1-202ENST00000376839 MB21D2Q8IYB1 491 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-202ENST00000376839 KIAA1468Q9P260 1216 aa15.4■□□□□ 0.06
ACTN1-202ENST00000376839 IMMTQ16891 758 aaKnown RBP15.4■□□□□ 0.06
ACTN1-202ENST00000376839 TTC39AQ5SRH9 613 aa15.4■□□□□ 0.06
ACTN1-202ENST00000376839 FBXO18Q8NFZ0 1043 aa15.4■□□□□ 0.06
ACTN1-202ENST00000376839 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.4■□□□□ 0.06
ACTN1-202ENST00000376839 XAGE2Q96GT9 111 aa15.4■□□□□ 0.06
ACTN1-202ENST00000376839 NAT10Q9H0A0 1025 aaKnown RBP15.4■□□□□ 0.06
ACTN1-202ENST00000376839 PUS7LQ9H0K6 701 aaKnown RBP15.4■□□□□ 0.06
ACTN1-202ENST00000376839 SPEF2Q9C093 1822 aa15.4■□□□□ 0.06
ACTN1-202ENST00000376839 BIN1O00499 593 aa15.39■□□□□ 0.06
ACTN1-202ENST00000376839 GORABQ5T7V8 394 aa15.39■□□□□ 0.06
ACTN1-202ENST00000376839 MYSM1Q5VVJ2 828 aa15.39■□□□□ 0.06
ACTN1-202ENST00000376839 CCAR2Q8N163 923 aaKnown RBP15.39■□□□□ 0.06
ACTN1-202ENST00000376839 SPTLC2O15270 562 aa15.39■□□□□ 0.05
ACTN1-202ENST00000376839 ZAP70P43403 619 aa15.39■□□□□ 0.05
ACTN1-202ENST00000376839 UTP14CQ5TAP6 766 aaKnown RBP15.39■□□□□ 0.05
ACTN1-202ENST00000376839 KCNG4Q8TDN1 519 aa15.39■□□□□ 0.05
ACTN1-202ENST00000376839 POLR3EQ9NVU0 708 aa15.39■□□□□ 0.05
ACTN1-202ENST00000376839 CTNNA3Q9UI47 895 aa15.39■□□□□ 0.05
ACTN1-202ENST00000376839 CCDC158Q5M9N0 1113 aa15.39■□□□□ 0.05
ACTN1-202ENST00000376839 ATG3Q9NT62 314 aa15.39■□□□□ 0.05
ACTN1-202ENST00000376839 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.39■□□□□ 0.052e-6■■■□□ 15.7
ACTN1-202ENST00000376839 DENND2AQ9ULE3 1009 aa15.39■□□□□ 0.05
ACTN1-202ENST00000376839 V9GYY5 206 aaPredicted RBP15.39■□□□□ 0.05
ACTN1-202ENST00000376839 YEATS4O95619 227 aa15.38■□□□□ 0.05
ACTN1-202ENST00000376839 ATF3P18847 181 aa15.38■□□□□ 0.05
ACTN1-202ENST00000376839 CCDC57Q2TAC2 916 aa15.38■□□□□ 0.05
ACTN1-202ENST00000376839 NKX2-3Q8TAU0 364 aa15.38■□□□□ 0.05
ACTN1-202ENST00000376839 ZNF215Q9UL58 517 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-202ENST00000376839 PARP4Q9UKK3 1724 aaKnown RBP15.38■□□□□ 0.05
ACTN1-202ENST00000376839 TRHP20396 242 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-202ENST00000376839 XPO4Q9C0E2 1151 aaKnown RBP15.38■□□□□ 0.05
ACTN1-202ENST00000376839 OSBPL5Q9H0X9 879 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-202ENST00000376839 KCPQ6ZWJ8 1503 aa15.38■□□□□ 0.05
ACTN1-202ENST00000376839 SMC2O95347 1197 aa15.37■□□□□ 0.05
ACTN1-202ENST00000376839 CHMP4CQ96CF2 233 aa15.37■□□□□ 0.05
ACTN1-202ENST00000376839 AIFM3Q96NN9 605 aa15.37■□□□□ 0.05
ACTN1-202ENST00000376839 IFNKQ9P0W0 207 aa15.37■□□□□ 0.05
ACTN1-202ENST00000376839 MROH7-TTC4A0A0A0MT08 1334 aa15.37■□□□□ 0.05
ACTN1-202ENST00000376839 CPLX1O14810 134 aa15.37■□□□□ 0.05
ACTN1-202ENST00000376839 ZNF202O95125 648 aa15.37■□□□□ 0.05
ACTN1-202ENST00000376839 KIF23Q02241 960 aaPredicted RBP15.37■□□□□ 0.05
ACTN1-202ENST00000376839 AXDND1Q5T1B0 1012 aaPredicted RBP15.37■□□□□ 0.05
ACTN1-202ENST00000376839 APPBP2Q92624 585 aa15.37■□□□□ 0.05
ACTN1-202ENST00000376839 FEZ1Q99689 392 aa15.37■□□□□ 0.05
ACTN1-202ENST00000376839 ZNF330Q9Y3S2 320 aaPredicted RBP15.37■□□□□ 0.05
ACTN1-202ENST00000376839 PLEKHG2Q9H7P9 1386 aa15.37■□□□□ 0.05
ACTN1-202ENST00000376839 GPAA1O43292 621 aa15.36■□□□□ 0.05
ACTN1-202ENST00000376839 SLC3A2P08195 630 aaKnown RBP15.36■□□□□ 0.05
ACTN1-202ENST00000376839 GSDMDP57764 484 aa15.36■□□□□ 0.05
ACTN1-202ENST00000376839 ARMCX5Q6P1M9 558 aa15.36■□□□□ 0.05
ACTN1-202ENST00000376839 BRAPQ7Z569 592 aa15.36■□□□□ 0.05
ACTN1-202ENST00000376839 NCOA7Q8NI08 942 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms