RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 GBP4Q96PP9 640 aa15.39■□□□□ 0.05
TRIM40-206ENST00000376724 MYH7P12883 1935 aa15.39■□□□□ 0.05
TRIM40-206ENST00000376724 ST5P78524 1137 aa15.39■□□□□ 0.05
TRIM40-206ENST00000376724 MAP3K12Q12852 859 aa15.39■□□□□ 0.05
TRIM40-206ENST00000376724 UBE3CQ15386 1083 aa15.39■□□□□ 0.05
TRIM40-206ENST00000376724 STOX1Q6ZVD7 989 aa15.39■□□□□ 0.05
TRIM40-206ENST00000376724 CCDC83Q8IWF9 413 aa15.39■□□□□ 0.05
TRIM40-206ENST00000376724 GNL3LQ9NVN8 582 aaKnown RBP15.39■□□□□ 0.05
TRIM40-206ENST00000376724 FOXP2O15409 715 aa15.38■□□□□ 0.05
TRIM40-206ENST00000376724 DTNBO60941 627 aa15.38■□□□□ 0.05
TRIM40-206ENST00000376724 KLRK1P26718 216 aa15.38■□□□□ 0.05
TRIM40-206ENST00000376724 SLC51AQ86UW1 340 aa15.38■□□□□ 0.05
TRIM40-206ENST00000376724 ANKRD2Q9GZV1 360 aa15.38■□□□□ 0.05
TRIM40-206ENST00000376724 TPCN1Q9ULQ1 816 aa15.38■□□□□ 0.05
TRIM40-206ENST00000376724 HAND2P61296 217 aa15.38■□□□□ 0.05
TRIM40-206ENST00000376724 ME3Q16798 604 aa15.38■□□□□ 0.05
TRIM40-206ENST00000376724 RPGRQ92834 1020 aaKnown RBP15.38■□□□□ 0.05
TRIM40-206ENST00000376724 FAM84BQ96KN1 310 aaPredicted RBP15.38■□□□□ 0.05
TRIM40-206ENST00000376724 ZSCAN31Q96LW9 406 aaPredicted RBP15.38■□□□□ 0.05
TRIM40-206ENST00000376724 LRP2BPQ9P2M1 347 aa15.38■□□□□ 0.05
TRIM40-206ENST00000376724 ABCF2Q9UG63 623 aa15.38■□□□□ 0.05
TRIM40-206ENST00000376724 TCRBV5S4A2TA0A5A2 114 aa15.37■□□□□ 0.05
TRIM40-206ENST00000376724 FGAP02671 866 aa15.37■□□□□ 0.05
TRIM40-206ENST00000376724 APPP05067 770 aa15.37■□□□□ 0.05
TRIM40-206ENST00000376724 DDR1Q08345 913 aa15.37■□□□□ 0.05
TRIM40-206ENST00000376724 GRAPQ13588 217 aa15.37■□□□□ 0.05
TRIM40-206ENST00000376724 TOB2Q14106 344 aaPredicted RBP15.37■□□□□ 0.05
TRIM40-206ENST00000376724 ANKRD1Q15327 319 aa15.37■□□□□ 0.05
TRIM40-206ENST00000376724 NECAB1Q8N987 351 aa15.37■□□□□ 0.05
TRIM40-206ENST00000376724 GRAPLQ8TC17 118 aaPredicted RBP15.37■□□□□ 0.05
TRIM40-206ENST00000376724 AIDAQ96BJ3 306 aa15.37■□□□□ 0.05
TRIM40-206ENST00000376724 LRRC2Q9BYS8 371 aa15.37■□□□□ 0.05
TRIM40-206ENST00000376724 RGS17Q9UGC6 210 aaPredicted RBP15.37■□□□□ 0.05
TRIM40-206ENST00000376724 CTNNA3Q9UI47 895 aa15.37■□□□□ 0.05
TRIM40-206ENST00000376724 A0A1B0GUL6 1792 aa15.37■□□□□ 0.05
TRIM40-206ENST00000376724 E7EWF7 191 aa15.36■□□□□ 0.05
TRIM40-206ENST00000376724 IMMTQ16891 758 aaKnown RBP15.36■□□□□ 0.05
TRIM40-206ENST00000376724 POTEAQ6S8J7 498 aa15.36■□□□□ 0.05
TRIM40-206ENST00000376724 SH2B1Q9NRF2 756 aaPredicted RBP15.36■□□□□ 0.05
TRIM40-206ENST00000376724 ANKIB1Q9P2G1 1089 aa15.36■□□□□ 0.05
TRIM40-206ENST00000376724 ZDHHC9Q9Y397 364 aa15.36■□□□□ 0.05
TRIM40-206ENST00000376724 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.36■□□□□ 0.05
TRIM40-206ENST00000376724 ZNF804BA4D1E1 1349 aa15.36■□□□□ 0.05
TRIM40-206ENST00000376724 POLRMTO00411 1230 aaKnown RBP15.36■□□□□ 0.05
TRIM40-206ENST00000376724 HMGB2P26583 209 aaKnown RBP15.36■□□□□ 0.05
TRIM40-206ENST00000376724 FGD1P98174 961 aa15.36■□□□□ 0.05
TRIM40-206ENST00000376724 Q6ZUG5 572 aa15.36■□□□□ 0.05
TRIM40-206ENST00000376724 COL23A1Q86Y22 540 aaPredicted RBP15.36■□□□□ 0.05
TRIM40-206ENST00000376724 DDX11L8A8MPP1 907 aa15.35■□□□□ 0.05
TRIM40-206ENST00000376724 STK3Q13188 491 aa15.35■□□□□ 0.05
TRIM40-206ENST00000376724 AKT1S1Q96B36 256 aa15.35■□□□□ 0.05
TRIM40-206ENST00000376724 SMC3Q9UQE7 1217 aa15.35■□□□□ 0.05
TRIM40-206ENST00000376724 BAG4O95429 457 aaKnown RBP15.34■□□□□ 0.05
TRIM40-206ENST00000376724 ALDH8A1Q9H2A2 487 aaPredicted RBP15.34■□□□□ 0.05
TRIM40-206ENST00000376724 RAI14Q9P0K7 980 aa15.34■□□□□ 0.05
TRIM40-206ENST00000376724 ZNF213O14771 459 aa15.34■□□□□ 0.05
TRIM40-206ENST00000376724 MBD4O95243 580 aa15.34■□□□□ 0.05
TRIM40-206ENST00000376724 HMGB1P09429 215 aaKnown RBP15.34■□□□□ 0.05
TRIM40-206ENST00000376724 HIBADHP31937 336 aaKnown RBP15.34■□□□□ 0.05
TRIM40-206ENST00000376724 DHX32Q7L7V1 743 aaKnown RBP15.34■□□□□ 0.05
TRIM40-206ENST00000376724 CHST3Q7LGC8 479 aa15.34■□□□□ 0.05
TRIM40-206ENST00000376724 STRBPQ96SI9 672 aaKnown RBP15.34■□□□□ 0.05
TRIM40-206ENST00000376724 ARMT1Q9H993 441 aa15.34■□□□□ 0.05
TRIM40-206ENST00000376724 DENND2AQ9ULE3 1009 aa15.34■□□□□ 0.05
TRIM40-206ENST00000376724 COL1A1P02452 1464 aaPredicted RBP15.33■□□□□ 0.04
TRIM40-206ENST00000376724 ST3GAL1Q11201 340 aa15.33■□□□□ 0.04
TRIM40-206ENST00000376724 FBXO33Q7Z6M2 555 aa15.33■□□□□ 0.04
TRIM40-206ENST00000376724 TXNRD3Q86VQ6 643 aa15.33■□□□□ 0.04
TRIM40-206ENST00000376724 MIGA1Q8NAN2 632 aa15.33■□□□□ 0.04
TRIM40-206ENST00000376724 BRF1Q92994 677 aa15.33■□□□□ 0.04
TRIM40-206ENST00000376724 RBM17Q96I25 401 aaKnown RBP15.33■□□□□ 0.04
TRIM40-206ENST00000376724 MCTP1Q6DN14 999 aa15.33■□□□□ 0.04
TRIM40-206ENST00000376724 UBE2Q2Q8WVN8 375 aa15.33■□□□□ 0.04
TRIM40-206ENST00000376724 DOCK2Q92608 1830 aa15.32■□□□□ 0.04
TRIM40-206ENST00000376724 TRAK2O60296 914 aa15.32■□□□□ 0.04
TRIM40-206ENST00000376724 CYP7A1P22680 504 aa15.32■□□□□ 0.04
TRIM40-206ENST00000376724 GJB2P29033 226 aa15.32■□□□□ 0.04
TRIM40-206ENST00000376724 CHAF1AQ13111 956 aaPredicted RBP15.32■□□□□ 0.04
TRIM40-206ENST00000376724 CRY2Q49AN0 593 aa15.32■□□□□ 0.04
TRIM40-206ENST00000376724 NLGN1Q8N2Q7 840 aa15.32■□□□□ 0.04
TRIM40-206ENST00000376724 CHAMP1Q96JM3 812 aa15.32■□□□□ 0.04
TRIM40-206ENST00000376724 JAG2Q9Y219 1238 aa15.32■□□□□ 0.04
TRIM40-206ENST00000376724 GOLGA6L22H0YM25 854 aa15.31■□□□□ 0.04
TRIM40-206ENST00000376724 BRD1O95696 1058 aa15.31■□□□□ 0.04
TRIM40-206ENST00000376724 LCORLQ8N3X6 602 aa15.31■□□□□ 0.04
TRIM40-206ENST00000376724 GPR101Q96P66 508 aaPredicted RBP15.31■□□□□ 0.04
TRIM40-206ENST00000376724 LAMA4Q16363 1823 aa15.31■□□□□ 0.04
TRIM40-206ENST00000376724 PATL2C9JE40 543 aaKnown RBP15.31■□□□□ 0.04
TRIM40-206ENST00000376724 PRKAB2O43741 272 aa15.31■□□□□ 0.04
TRIM40-206ENST00000376724 EXOSC10Q01780 885 aaKnown RBP15.31■□□□□ 0.04
TRIM40-206ENST00000376724 GSE1Q14687 1217 aa15.31■□□□□ 0.04
TRIM40-206ENST00000376724 MSL1Q68DK7 614 aa15.31■□□□□ 0.04
TRIM40-206ENST00000376724 CLEC17AQ6ZS10 378 aa15.31■□□□□ 0.04
TRIM40-206ENST00000376724 ADGRA1Q86SQ6 560 aa15.31■□□□□ 0.04
TRIM40-206ENST00000376724 NSFL1CQ9UNZ2 370 aaKnown RBP15.31■□□□□ 0.04
TRIM40-206ENST00000376724 XDHP47989 1333 aa15.3■□□□□ 0.04
TRIM40-206ENST00000376724 GPSM2P81274 684 aa15.3■□□□□ 0.04
TRIM40-206ENST00000376724 FOXD4L6Q3SYB3 417 aaPredicted RBP15.3■□□□□ 0.04
TRIM40-206ENST00000376724 FOXD4L3Q6VB84 417 aaPredicted RBP15.3■□□□□ 0.04
TRIM40-206ENST00000376724 NAP1L2Q9ULW6 460 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms