RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 FDPSP14324 419 aaKnown RBP13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 NCAPHQ15003 741 aa13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 HOMER1Q86YM7 354 aa13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 TMTC2Q8N394 836 aa13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 DPF2Q92785 391 aa13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 ZCCHC17Q9NP64 241 aaKnown RBP13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 U3KPZ7 1027 aaPredicted RBP13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 LTN1O94822 1766 aa13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 ZRANB2O95218 330 aaKnown RBP eCLIP13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 MCMDC2Q4G0Z9 681 aa13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 EGFL6Q8IUX8 553 aa13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 NEK11Q8NG66 645 aa13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 NAT10Q9H0A0 1025 aaKnown RBP13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 IMPACTQ9P2X3 320 aa13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 ADAMTSL3P82987 1691 aa13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 MYL6BP14649 208 aa13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 ATP5JP18859 108 aa13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 PIP4K2AP48426 406 aaPredicted RBP13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 MMP14P50281 582 aa13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 PDIA6Q15084 440 aa13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 TNNI3KQ59H18 835 aa13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 DHX32Q7L7V1 743 aaKnown RBP13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 ZNF396Q96N95 335 aaPredicted RBP13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 LLPHQ9BRT6 129 aaKnown RBP13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 TMX1Q9H3N1 280 aa13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 ORC3Q9UBD5 711 aaPredicted RBP13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 FPGT-TNNI3KV9GXZ4 949 aa13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 SALL1Q9NSC2 1324 aa13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 KIF2AO00139 706 aaPredicted RBP13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 ST5P78524 1137 aa13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 TRIM65Q6PJ69 517 aa13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 RAB11FIP4Q86YS3 637 aa13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 SGSM3Q96HU1 749 aa13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 HSD3B7Q9H2F3 369 aa13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 ABCC6O95255 1503 aa13.34□□□□□ -0.27
TM9SF2-201ENST00000376387 PSDA5PKW4 1024 aaPredicted RBP13.33□□□□□ -0.27
TM9SF2-201ENST00000376387 RNMTO43148 476 aaKnown RBP13.33□□□□□ -0.27
TM9SF2-201ENST00000376387 PDIA3P30101 505 aaKnown RBP13.33□□□□□ -0.28
TM9SF2-201ENST00000376387 EXOSC10Q01780 885 aaKnown RBP13.33□□□□□ -0.28
TM9SF2-201ENST00000376387 AKAP4Q5JQC9 854 aa13.33□□□□□ -0.28
TM9SF2-201ENST00000376387 RIC3Q7Z5B4 369 aa13.33□□□□□ -0.28
TM9SF2-201ENST00000376387 CCDC150Q8NCX0 1101 aa13.33□□□□□ -0.28
TM9SF2-201ENST00000376387 CARD6Q9BX69 1037 aa13.33□□□□□ -0.28
TM9SF2-201ENST00000376387 CARMIL3Q8ND23 1372 aa13.33□□□□□ -0.28
TM9SF2-201ENST00000376387 SASH3O75995 380 aa13.33□□□□□ -0.28
TM9SF2-201ENST00000376387 TULP2O00295 520 aa13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 ETF1P62495 437 aaKnown RBP13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 ADALQ6DHV7 355 aa13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 ZNF513Q8N8E2 541 aaPredicted RBP13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 LINC00301Q8NCQ3 95 aa13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 CALCOCO1Q9P1Z2 691 aa13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 NCAPD2Q15021 1401 aa13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 NEURL1BA8MQ27 555 aa13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 URI1O94763 535 aaPredicted RBP13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 FANCCQ00597 558 aa13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 TTLL5Q6EMB2 1281 aa13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 IP6K1Q92551 441 aa13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 MYD88Q99836 296 aa13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 RFX5P48382 616 aaPredicted RBP13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 PTPN12Q05209 780 aaKnown RBP13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 UBXN4Q92575 508 aa13.32□□□□□ -0.28
TM9SF2-201ENST00000376387 MRC1P22897 1456 aa13.31□□□□□ -0.28
TM9SF2-201ENST00000376387 TMEM232C9JQI7 657 aa13.31□□□□□ -0.28
TM9SF2-201ENST00000376387 E7EWF7 191 aa13.31□□□□□ -0.28
TM9SF2-201ENST00000376387 SLC39A6Q13433 755 aa13.31□□□□□ -0.28
TM9SF2-201ENST00000376387 UTP14AQ9BVJ6 771 aaKnown RBP13.31□□□□□ -0.28
TM9SF2-201ENST00000376387 RTEL1Q9NZ71 1219 aa13.31□□□□□ -0.28
TM9SF2-201ENST00000376387 GYS2P54840 703 aa13.31□□□□□ -0.28
TM9SF2-201ENST00000376387 GCKRQ14397 625 aa13.31□□□□□ -0.28
TM9SF2-201ENST00000376387 STK38Q15208 465 aa13.31□□□□□ -0.28
TM9SF2-201ENST00000376387 SF3A1Q15459 793 aaKnown RBP13.31□□□□□ -0.28
TM9SF2-201ENST00000376387 TMCO3Q6UWJ1 677 aa13.31□□□□□ -0.28
TM9SF2-201ENST00000376387 NFATC2IPQ8NCF5 419 aa13.31□□□□□ -0.28
TM9SF2-201ENST00000376387 TADA3O75528 432 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 ZNF202O95125 648 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 SLC3A2P08195 630 aaKnown RBP13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 POLD1P28340 1107 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 ARID4AP29374 1257 aaPredicted RBP13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 REXO1L1PQ8IX06 675 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 SMARCE1Q969G3 411 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 PARP3Q9Y6F1 533 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 LMO7Q8WWI1 1683 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 HEG1Q9ULI3 1381 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 KIF28PB7ZC32 967 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 GOLIM4O00461 696 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 NLRP12P59046 1061 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 ZRSR1Q15695 479 aaKnown RBP13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 CCDC34Q96HJ3 373 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 HAUS7Q99871 368 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 BPIFA3Q9BQP9 254 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 MROH7-TTC4A0A0A0MT08 1334 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 HSP90AA4PQ58FG1 418 aa13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 DDX21Q9NR30 783 aaKnown RBP eCLIP13.3□□□□□ -0.28
TM9SF2-201ENST00000376387 XAGE3Q8WTP9 111 aa13.29□□□□□ -0.28
TM9SF2-201ENST00000376387 RBM33Q96EV2 1170 aaKnown RBP13.29□□□□□ -0.28
TM9SF2-201ENST00000376387 AGXT2Q9BYV1 514 aa13.29□□□□□ -0.28
TM9SF2-201ENST00000376387 A0A1W2PQ27 194 aa13.29□□□□□ -0.28
TM9SF2-201ENST00000376387 A0A1W2PQ64 194 aa13.29□□□□□ -0.28
TM9SF2-201ENST00000376387 A0A1W2PQD8 194 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms