RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 UVSSAQ2YD98 709 aa15.5■□□□□ 0.07
COL4A1-201ENST00000375820 C8orf58Q8NAV2 365 aa15.5■□□□□ 0.07
COL4A1-201ENST00000375820 CCDC42Q96M95 316 aa15.5■□□□□ 0.07
COL4A1-201ENST00000375820 SPTLC2O15270 562 aa15.5■□□□□ 0.07
COL4A1-201ENST00000375820 KIF5AQ12840 1032 aa15.5■□□□□ 0.07
COL4A1-201ENST00000375820 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.5■□□□□ 0.07
COL4A1-201ENST00000375820 SMC6Q96SB8 1091 aa15.5■□□□□ 0.07
COL4A1-201ENST00000375820 ZRANB1Q9UGI0 708 aa15.5■□□□□ 0.07
COL4A1-201ENST00000375820 ODF2LQ9ULJ1 636 aa15.5■□□□□ 0.07
COL4A1-201ENST00000375820 ZNF174Q15697 407 aa15.5■□□□□ 0.07
COL4A1-201ENST00000375820 TEX13AQ9BXU3 409 aaPredicted RBP15.5■□□□□ 0.07
COL4A1-201ENST00000375820 CTNND2Q9UQB3 1225 aa15.5■□□□□ 0.07
COL4A1-201ENST00000375820 MAPK8IP1Q9UQF2 711 aa15.5■□□□□ 0.07
COL4A1-201ENST00000375820 PCDHB15Q9Y5E8 787 aa15.5■□□□□ 0.07
COL4A1-201ENST00000375820 DISP3Q9P2K9 1392 aa15.5■□□□□ 0.07
COL4A1-201ENST00000375820 BACH1O14867 736 aa15.5■□□□□ 0.07
COL4A1-201ENST00000375820 ZGPATQ8N5A5 531 aaKnown RBP15.5■□□□□ 0.07
COL4A1-201ENST00000375820 SEC62Q99442 399 aaKnown RBP15.5■□□□□ 0.07
COL4A1-201ENST00000375820 NSFL1CQ9UNZ2 370 aaKnown RBP15.5■□□□□ 0.07
COL4A1-201ENST00000375820 TFCP2Q12800 502 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 KRT24Q2M2I5 525 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 LRRC45Q96CN5 670 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 NOS1P29475 1434 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 DYNC1I1O14576 645 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 PPP2R5DQ14738 602 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 ZCRB1Q8TBF4 217 aaKnown RBP15.49■□□□□ 0.07
COL4A1-201ENST00000375820 CNNM2Q9H8M5 875 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 TXNDC16Q9P2K2 825 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 AK2P54819 239 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 TYRO3Q06418 890 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 DAAM2Q86T65 1068 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 NAP1L3Q99457 506 aaPredicted RBP15.49■□□□□ 0.07
COL4A1-201ENST00000375820 TRIM75PA6NK02 468 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 GRM8O00222 908 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 RAB3GAP1Q15042 981 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 KRT79Q5XKE5 535 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 CCDC121Q6ZUS5 278 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 GOLGA1Q92805 767 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 NLRP3Q96P20 1036 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 IDI1Q13907 227 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 USP37Q86T82 979 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 SMC1BQ8NDV3 1235 aa15.49■□□□□ 0.07
COL4A1-201ENST00000375820 PPP2R5CQ13362 524 aa15.48■□□□□ 0.07
COL4A1-201ENST00000375820 ZNF804AQ7Z570 1209 aa15.48■□□□□ 0.07
COL4A1-201ENST00000375820 CCDC77Q9BR77 488 aa15.48■□□□□ 0.07
COL4A1-201ENST00000375820 GPCPD1Q9NPB8 672 aa15.48■□□□□ 0.07
COL4A1-201ENST00000375820 FAM169AQ9Y6X4 670 aa15.48■□□□□ 0.07
COL4A1-201ENST00000375820 VWA3AA6NCI4 1184 aa15.48■□□□□ 0.07
COL4A1-201ENST00000375820 ZYXQ15942 572 aaKnown RBP15.48■□□□□ 0.07
COL4A1-201ENST00000375820 GEN1Q17RS7 908 aa15.48■□□□□ 0.07
COL4A1-201ENST00000375820 LONRF3Q496Y0 759 aa15.48■□□□□ 0.07
COL4A1-201ENST00000375820 CPLX4Q7Z7G2 160 aa15.48■□□□□ 0.07
COL4A1-201ENST00000375820 FAM200AQ8TCP9 573 aa15.48■□□□□ 0.07
COL4A1-201ENST00000375820 ABCC5O15440 1437 aa15.48■□□□□ 0.07
COL4A1-201ENST00000375820 FNBP4Q8N3X1 1017 aaPredicted RBP15.48■□□□□ 0.07
COL4A1-201ENST00000375820 MAK16Q9BXY0 300 aaKnown RBP15.48■□□□□ 0.07
COL4A1-201ENST00000375820 CFAP157Q5JU67 520 aa15.48■□□□□ 0.07
COL4A1-201ENST00000375820 ANKS4BQ8N8V4 417 aa15.48■□□□□ 0.07
COL4A1-201ENST00000375820 GTF3C6Q969F1 213 aa15.48■□□□□ 0.07
COL4A1-201ENST00000375820 KAT6BQ8WYB5 2073 aa15.47■□□□□ 0.07
COL4A1-201ENST00000375820 ZNF526Q8TF50 670 aaPredicted RBP15.47■□□□□ 0.07
COL4A1-201ENST00000375820 OPA1O60313 960 aa15.47■□□□□ 0.07
COL4A1-201ENST00000375820 A0A1B0GVL5 298 aa15.47■□□□□ 0.07
COL4A1-201ENST00000375820 HPDP32754 393 aaPredicted RBP15.47■□□□□ 0.07
COL4A1-201ENST00000375820 NAA25Q14CX7 972 aa15.47■□□□□ 0.07
COL4A1-201ENST00000375820 DZIP3Q86Y13 1208 aaKnown RBP15.47■□□□□ 0.07
COL4A1-201ENST00000375820 GINS2Q9Y248 185 aa15.47■□□□□ 0.07
COL4A1-201ENST00000375820 LETM2Q2VYF4 491 aa15.47■□□□□ 0.07
COL4A1-201ENST00000375820 ANAPC4Q9UJX5 808 aa15.47■□□□□ 0.07
COL4A1-201ENST00000375820 TTC21BQ7Z4L5 1316 aa15.47■□□□□ 0.07
COL4A1-201ENST00000375820 PTPDC1A2A3K4 754 aa15.46■□□□□ 0.07
COL4A1-201ENST00000375820 DDX39AO00148 427 aaKnown RBP15.46■□□□□ 0.07
COL4A1-201ENST00000375820 ATP2A1O14983 1001 aa15.46■□□□□ 0.07
COL4A1-201ENST00000375820 PRIMPOLQ96LW4 560 aa15.46■□□□□ 0.07
COL4A1-201ENST00000375820 CLSTN2Q9H4D0 955 aa15.46■□□□□ 0.07
COL4A1-201ENST00000375820 CCDC141Q6ZP82 1450 aa15.46■□□□□ 0.07
COL4A1-201ENST00000375820 KRT86O43790 486 aa15.46■□□□□ 0.07
COL4A1-201ENST00000375820 XRCC6P12956 609 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL4A1-201ENST00000375820 NFATC2IPQ8NCF5 419 aa15.46■□□□□ 0.07
COL4A1-201ENST00000375820 BIN2Q9UBW5 565 aaPredicted RBP15.46■□□□□ 0.07
COL4A1-201ENST00000375820 GJA3Q9Y6H8 435 aa15.46■□□□□ 0.07
COL4A1-201ENST00000375820 SYNJ1O43426 1573 aa15.46■□□□□ 0.07
COL4A1-201ENST00000375820 PLEKHA4Q9H4M7 779 aa15.46■□□□□ 0.07
COL4A1-201ENST00000375820 AGTPBP1Q9UPW5 1226 aa15.46■□□□□ 0.07
COL4A1-201ENST00000375820 TIAM1Q13009 1591 aa15.46■□□□□ 0.07
COL4A1-201ENST00000375820 NCBP1Q09161 790 aaKnown RBP15.45■□□□□ 0.06
COL4A1-201ENST00000375820 BIRC3Q13489 604 aa15.45■□□□□ 0.06
COL4A1-201ENST00000375820 LEO1Q8WVC0 666 aaPredicted RBP15.45■□□□□ 0.06
COL4A1-201ENST00000375820 ZNF408Q9H9D4 720 aa15.45■□□□□ 0.06
COL4A1-201ENST00000375820 PFDN4Q9NQP4 134 aa15.45■□□□□ 0.06
COL4A1-201ENST00000375820 CFAP57Q96MR6 1250 aa15.45■□□□□ 0.06
COL4A1-201ENST00000375820 KRT83P78385 493 aa15.45■□□□□ 0.06
COL4A1-201ENST00000375820 FCHSD1Q86WN1 690 aa15.45■□□□□ 0.06
COL4A1-201ENST00000375820 TMTC2Q8N394 836 aa15.45■□□□□ 0.06
COL4A1-201ENST00000375820 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.45■□□□□ 0.06
COL4A1-201ENST00000375820 SLU7O95391 586 aaKnown RBP15.45■□□□□ 0.06
COL4A1-201ENST00000375820 CREB3L3Q68CJ9 461 aa15.45■□□□□ 0.06
COL4A1-201ENST00000375820 ZMYND15Q9H091 742 aa15.45■□□□□ 0.06
COL4A1-201ENST00000375820 PPANQ9NQ55 473 aaKnown RBP15.45■□□□□ 0.06
COL4A1-201ENST00000375820 DTHD1Q6ZMT9 781 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms