RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 KINO60870 393 aaKnown RBP16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 KIF20AO95235 890 aa16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 ME1P48163 572 aa16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 NYAP1Q6ZVC0 841 aa16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 AOPEPQ8N6M6 819 aa16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 FSIP1Q8NA03 581 aa16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 ENGASEQ8NFI3 743 aa16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 COPRSQ9NQ92 184 aa16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 NRAPQ86VF7 1730 aa16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 SPATA31A6Q5VVP1 1343 aa16.5■□□□□ 0.23
CLCNKA-202ENST00000375692 SNRPA1P09661 255 aaKnown RBP16.5■□□□□ 0.23
CLCNKA-202ENST00000375692 MEX3CQ5U5Q3 659 aaKnown RBP16.5■□□□□ 0.23
CLCNKA-202ENST00000375692 ACSBG1Q96GR2 724 aa16.5■□□□□ 0.23
CLCNKA-202ENST00000375692 CTAGE5O15320 804 aa16.5■□□□□ 0.23
CLCNKA-202ENST00000375692 NAA16Q6N069 864 aaPredicted RBP16.5■□□□□ 0.23
CLCNKA-202ENST00000375692 DHX32Q7L7V1 743 aaKnown RBP16.5■□□□□ 0.23
CLCNKA-202ENST00000375692 UBE3BQ7Z3V4 1068 aa16.5■□□□□ 0.23
CLCNKA-202ENST00000375692 ILDR1Q86SU0 546 aaPredicted RBP16.5■□□□□ 0.23
CLCNKA-202ENST00000375692 KIF18AQ8NI77 898 aa16.5■□□□□ 0.23
CLCNKA-202ENST00000375692 NPHP1O15259 732 aa16.49■□□□□ 0.23
CLCNKA-202ENST00000375692 KMT5BQ4FZB7 885 aa16.49■□□□□ 0.23
CLCNKA-202ENST00000375692 METTL22Q9BUU2 404 aaPredicted RBP16.49■□□□□ 0.23
CLCNKA-202ENST00000375692 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
CLCNKA-202ENST00000375692 ATP5J2-PTCD1G3V325 749 aa16.49■□□□□ 0.23
CLCNKA-202ENST00000375692 FAM160A1Q05DH4 1040 aa16.49■□□□□ 0.23
CLCNKA-202ENST00000375692 ZNF771Q7L3S4 317 aaPredicted RBP16.49■□□□□ 0.23
CLCNKA-202ENST00000375692 HAUS7Q99871 368 aa16.49■□□□□ 0.23
CLCNKA-202ENST00000375692 LLPHQ9BRT6 129 aaKnown RBP16.49■□□□□ 0.23
CLCNKA-202ENST00000375692 ANO10Q9NW15 660 aa16.49■□□□□ 0.23
CLCNKA-202ENST00000375692 A0A1B0GVL5 298 aa16.48■□□□□ 0.23
CLCNKA-202ENST00000375692 CCAR2Q8N163 923 aaKnown RBP16.48■□□□□ 0.23
CLCNKA-202ENST00000375692 NEMFO60524 1076 aa16.48■□□□□ 0.23
CLCNKA-202ENST00000375692 VPS72Q15906 364 aa16.48■□□□□ 0.23
CLCNKA-202ENST00000375692 FAM182BQ5T319 152 aa16.48■□□□□ 0.23
CLCNKA-202ENST00000375692 OTUD7BQ6GQQ9 843 aa16.48■□□□□ 0.23
CLCNKA-202ENST00000375692 ATG3Q9NT62 314 aa16.48■□□□□ 0.23
CLCNKA-202ENST00000375692 GOLIM4O00461 696 aa16.47■□□□□ 0.23
CLCNKA-202ENST00000375692 BARGINQ6ZT62 677 aa16.47■□□□□ 0.23
CLCNKA-202ENST00000375692 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
CLCNKA-202ENST00000375692 NBPF11Q86T75 865 aa16.47■□□□□ 0.23
CLCNKA-202ENST00000375692 PCDHA7Q9UN72 937 aa16.47■□□□□ 0.23
CLCNKA-202ENST00000375692 MORC2Q9Y6X9 1032 aaPredicted RBP16.47■□□□□ 0.23
CLCNKA-202ENST00000375692 TOGARAM1Q9Y4F4 1720 aa16.47■□□□□ 0.23
CLCNKA-202ENST00000375692 ELF2Q15723 593 aa16.47■□□□□ 0.23
CLCNKA-202ENST00000375692 CEP57L1Q8IYX8 460 aa16.47■□□□□ 0.23
CLCNKA-202ENST00000375692 ZNF396Q96N95 335 aaPredicted RBP16.47■□□□□ 0.23
CLCNKA-202ENST00000375692 NEUROD6Q96NK8 337 aa16.47■□□□□ 0.23
CLCNKA-202ENST00000375692 SDF4Q9BRK5 362 aa16.47■□□□□ 0.23
CLCNKA-202ENST00000375692 A1BGP04217 495 aa16.46■□□□□ 0.23
CLCNKA-202ENST00000375692 EXOSC10Q01780 885 aaKnown RBP16.46■□□□□ 0.23
CLCNKA-202ENST00000375692 KBTBD3Q8NAB2 608 aa16.46■□□□□ 0.23
CLCNKA-202ENST00000375692 GPHNQ9NQX3 736 aaPredicted RBP16.46■□□□□ 0.23
CLCNKA-202ENST00000375692 C5P01031 1676 aa16.46■□□□□ 0.22
CLCNKA-202ENST00000375692 NBPF26B4DH59 902 aa16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 KCNQ2O43526 872 aa16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 PDIA3P30101 505 aaKnown RBP16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 NDUFA8P51970 172 aa16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 NBPF14Q5TI25 921 aa16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 NBPF10Q6P3W6 841 aaKnown RBP16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 FBXO38Q6PIJ6 1188 aa16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 FMR1NBQ8N0W7 255 aaPredicted RBP16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 NBPF15Q8N660 670 aa16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 CDCA7Q9BWT1 371 aaPredicted RBP16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 AFF2P51816 1311 aa16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 TNS2Q63HR2 1409 aa16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 E7EWF7 191 aa16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 TIMM10P62072 90 aa16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 DPCR1Q3MIW9 517 aa16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 TTLL5Q6EMB2 1281 aa16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 LRP10Q7Z4F1 713 aa16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 ZNF397Q8NF99 534 aaPredicted RBP16.45■□□□□ 0.22
CLCNKA-202ENST00000375692 A0A087WZG4 1122 aa16.44■□□□□ 0.22
CLCNKA-202ENST00000375692 BIN1O00499 593 aa16.44■□□□□ 0.22
CLCNKA-202ENST00000375692 HMGB1P09429 215 aaKnown RBP16.44■□□□□ 0.22
CLCNKA-202ENST00000375692 SLFN14P0C7P3 912 aa16.44■□□□□ 0.22
CLCNKA-202ENST00000375692 FDPSP14324 419 aaKnown RBP16.44■□□□□ 0.22
CLCNKA-202ENST00000375692 SLC4A9Q96Q91 983 aa16.44■□□□□ 0.22
CLCNKA-202ENST00000375692 POLR3DP05423 398 aaPredicted RBP16.44■□□□□ 0.22
CLCNKA-202ENST00000375692 LMBR1LQ6UX01 489 aa16.44■□□□□ 0.22
CLCNKA-202ENST00000375692 PTF1AQ7RTS3 328 aa16.44■□□□□ 0.22
CLCNKA-202ENST00000375692 MRPS27Q92552 414 aaKnown RBP16.44■□□□□ 0.22
CLCNKA-202ENST00000375692 CLIC4Q9Y696 253 aa16.44■□□□□ 0.22
CLCNKA-202ENST00000375692 NWD2Q9ULI1 1742 aa16.44■□□□□ 0.22
CLCNKA-202ENST00000375692 LRRN4CLQ8ND94 238 aa16.43■□□□□ 0.22
CLCNKA-202ENST00000375692 XPO4Q9C0E2 1151 aaKnown RBP16.43■□□□□ 0.22
CLCNKA-202ENST00000375692 GJB4Q9NTQ9 266 aa16.43■□□□□ 0.22
CLCNKA-202ENST00000375692 SALL1Q9NSC2 1324 aa16.43■□□□□ 0.22
CLCNKA-202ENST00000375692 SMC2O95347 1197 aa16.43■□□□□ 0.22
CLCNKA-202ENST00000375692 HSPD1P10809 573 aaKnown RBP16.43■□□□□ 0.22
CLCNKA-202ENST00000375692 E4F1Q66K89 784 aaPredicted RBP16.43■□□□□ 0.22
CLCNKA-202ENST00000375692 RAB11FIP4Q86YS3 637 aa16.43■□□□□ 0.22
CLCNKA-202ENST00000375692 DNAJC10Q8IXB1 793 aa16.43■□□□□ 0.22
CLCNKA-202ENST00000375692 ERO1AQ96HE7 468 aa16.43■□□□□ 0.22
CLCNKA-202ENST00000375692 NAT10Q9H0A0 1025 aaKnown RBP16.43■□□□□ 0.22
CLCNKA-202ENST00000375692 PAG1Q9NWQ8 432 aa16.43■□□□□ 0.22
CLCNKA-202ENST00000375692 IFNKQ9P0W0 207 aa16.43■□□□□ 0.22
CLCNKA-202ENST00000375692 KCPQ6ZWJ8 1503 aa16.43■□□□□ 0.22
CLCNKA-202ENST00000375692 EP400Q96L91 3159 aa16.43■□□□□ 0.22
CLCNKA-202ENST00000375692 RABL6Q3YEC7 729 aaPredicted RBP16.42■□□□□ 0.22
CLCNKA-202ENST00000375692 ISM2Q6H9L7 571 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms