RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 UBE3BQ7Z3V4 1068 aa15.44■□□□□ 0.06
LSM2-208ENST00000375661 KIAA0825Q8IV33 1275 aa15.44■□□□□ 0.06
LSM2-208ENST00000375661 MTMR14Q8NCE2 650 aa15.44■□□□□ 0.06
LSM2-208ENST00000375661 GCC1Q96CN9 775 aa15.44■□□□□ 0.06
LSM2-208ENST00000375661 ANGEL1Q9UNK9 670 aaKnown RBP15.44■□□□□ 0.06
LSM2-208ENST00000375661 CSF1RP07333 972 aa15.43■□□□□ 0.06
LSM2-208ENST00000375661 ITGA6P23229 1130 aa15.43■□□□□ 0.06
LSM2-208ENST00000375661 GTF2IP78347 998 aa15.43■□□□□ 0.06
LSM2-208ENST00000375661 MKRN3Q13064 507 aaKnown RBP15.43■□□□□ 0.06
LSM2-208ENST00000375661 DEFB129Q9H1M3 183 aa15.43■□□□□ 0.06
LSM2-208ENST00000375661 CD209Q9NNX6 404 aa15.43■□□□□ 0.06
LSM2-208ENST00000375661 PPP1R12BO60237 982 aaPredicted RBP15.42■□□□□ 0.06
LSM2-208ENST00000375661 KCNJ4P48050 445 aa15.42■□□□□ 0.06
LSM2-208ENST00000375661 PRKG1Q13976 671 aa15.42■□□□□ 0.06
LSM2-208ENST00000375661 GCKRQ14397 625 aa15.42■□□□□ 0.06
LSM2-208ENST00000375661 DLGAP5Q15398 846 aa15.42■□□□□ 0.06
LSM2-208ENST00000375661 INTS3Q68E01 1043 aaKnown RBP15.42■□□□□ 0.06
LSM2-208ENST00000375661 C15orf52Q6ZUT6 534 aaKnown RBP15.42■□□□□ 0.06
LSM2-208ENST00000375661 SLC10A4Q96EP9 437 aa15.42■□□□□ 0.06
LSM2-208ENST00000375661 YTHDC1Q96MU7 727 aaKnown RBP15.42■□□□□ 0.06
LSM2-208ENST00000375661 MYO1BO43795 1136 aa15.41■□□□□ 0.06
LSM2-208ENST00000375661 CASP7P55210 303 aa15.41■□□□□ 0.06
LSM2-208ENST00000375661 FKBP1AP62942 108 aaKnown RBP15.41■□□□□ 0.06
LSM2-208ENST00000375661 CHRNDQ07001 517 aa15.41■□□□□ 0.06
LSM2-208ENST00000375661 IFNL1Q8IU54 200 aa15.41■□□□□ 0.06
LSM2-208ENST00000375661 IRS2Q9Y4H2 1338 aa15.41■□□□□ 0.06
LSM2-208ENST00000375661 ANKRD18BA2A2Z9 1011 aa15.4■□□□□ 0.06
LSM2-208ENST00000375661 SLC4A2P04920 1241 aa15.4■□□□□ 0.06
LSM2-208ENST00000375661 KLRK1P26718 216 aa15.4■□□□□ 0.06
LSM2-208ENST00000375661 SUPT20HL1Q3ZLR7 823 aa15.4■□□□□ 0.06
LSM2-208ENST00000375661 WNK4Q96J92 1243 aa15.4■□□□□ 0.06
LSM2-208ENST00000375661 R3HDMLQ9H3Y0 253 aa15.4■□□□□ 0.06
LSM2-208ENST00000375661 SSC5DA1L4H1 1573 aa15.4■□□□□ 0.06
LSM2-208ENST00000375661 IL1R1P14778 569 aa15.39■□□□□ 0.05
LSM2-208ENST00000375661 OTUD7BQ6GQQ9 843 aa15.39■□□□□ 0.05
LSM2-208ENST00000375661 LINS1Q8NG48 757 aa15.39■□□□□ 0.05
LSM2-208ENST00000375661 ERO1AQ96HE7 468 aa15.39■□□□□ 0.05
LSM2-208ENST00000375661 OTOFQ9HC10 1997 aa15.38■□□□□ 0.05
LSM2-208ENST00000375661 ARAP2Q8WZ64 1704 aa15.38■□□□□ 0.05
LSM2-208ENST00000375661 FLIIQ13045 1269 aa15.38■□□□□ 0.05
LSM2-208ENST00000375661 G2E3Q7L622 706 aa15.38■□□□□ 0.05
LSM2-208ENST00000375661 OTOP1Q7RTM1 612 aa15.38■□□□□ 0.05
LSM2-208ENST00000375661 ZNF804AQ7Z570 1209 aa15.38■□□□□ 0.05
LSM2-208ENST00000375661 CERS5Q8N5B7 392 aa15.38■□□□□ 0.05
LSM2-208ENST00000375661 DNAAF4Q8WXU2 420 aa15.38■□□□□ 0.05
LSM2-208ENST00000375661 TRIM17Q9Y577 477 aa15.38■□□□□ 0.05
LSM2-208ENST00000375661 SPDYE2BA6NHP3 402 aa15.37■□□□□ 0.05
LSM2-208ENST00000375661 IGF2BP3O00425 579 aaKnown RBP eCLIP15.37■□□□□ 0.05
LSM2-208ENST00000375661 SPDYE6P0CI01 402 aa15.37■□□□□ 0.05
LSM2-208ENST00000375661 IREB2P48200 963 aaKnown RBP15.37■□□□□ 0.05
LSM2-208ENST00000375661 CFAP100Q494V2 611 aa15.37■□□□□ 0.05
LSM2-208ENST00000375661 CT47B1P0C2W7 299 aaPredicted RBP15.36■□□□□ 0.05
LSM2-208ENST00000375661 IFIT5Q13325 482 aaKnown RBP15.36■□□□□ 0.05
LSM2-208ENST00000375661 FKBP5Q13451 457 aaPredicted RBP15.36■□□□□ 0.05
LSM2-208ENST00000375661 ANKRD13AQ8IZ07 590 aa15.36■□□□□ 0.05
LSM2-208ENST00000375661 CLMNQ96JQ2 1002 aa15.36■□□□□ 0.05
LSM2-208ENST00000375661 TESPA1A2RU30 521 aaPredicted RBP15.35■□□□□ 0.05
LSM2-208ENST00000375661 TNFAIP1Q13829 316 aa15.35■□□□□ 0.05
LSM2-208ENST00000375661 PRMT6Q96LA8 375 aaPredicted RBP15.35■□□□□ 0.05
LSM2-208ENST00000375661 FZD1Q9UP38 647 aa15.35■□□□□ 0.05
LSM2-208ENST00000375661 PTPN22Q9Y2R2 807 aa15.35■□□□□ 0.05
LSM2-208ENST00000375661 TAF5LO75529 589 aa15.34■□□□□ 0.05
LSM2-208ENST00000375661 USP2O75604 605 aaPredicted RBP15.34■□□□□ 0.05
LSM2-208ENST00000375661 NBPF12Q5TAG4 269 aaPredicted RBP15.34■□□□□ 0.05
LSM2-208ENST00000375661 MRPL50Q8N5N7 158 aaKnown RBP15.34■□□□□ 0.05
LSM2-208ENST00000375661 SSH1Q8WYL5 1049 aa15.34■□□□□ 0.05
LSM2-208ENST00000375661 ARMC5Q96C12 935 aa15.34■□□□□ 0.05
LSM2-208ENST00000375661 VEZTQ9HBM0 779 aa15.34■□□□□ 0.05
LSM2-208ENST00000375661 FAM205AQ6ZU69 1335 aa15.34■□□□□ 0.05
LSM2-208ENST00000375661 CLRN2A0PK11 232 aa15.33■□□□□ 0.04
LSM2-208ENST00000375661 F8W031 263 aaPredicted RBP15.33■□□□□ 0.04
LSM2-208ENST00000375661 FOXO4P98177 505 aa15.33■□□□□ 0.04
LSM2-208ENST00000375661 CRHR2Q13324 411 aa15.33■□□□□ 0.04
LSM2-208ENST00000375661 HELBQ8NG08 1087 aaPredicted RBP15.33■□□□□ 0.04
LSM2-208ENST00000375661 PCDHAC2Q9Y5I4 1007 aa15.33■□□□□ 0.04
LSM2-208ENST00000375661 POTEFA5A3E0 1075 aa15.32■□□□□ 0.04
LSM2-208ENST00000375661 SNAP23O00161 211 aa15.32■□□□□ 0.04
LSM2-208ENST00000375661 RARSP54136 660 aaKnown RBP15.32■□□□□ 0.04
LSM2-208ENST00000375661 SP3Q02447 781 aa15.32■□□□□ 0.04
LSM2-208ENST00000375661 RASA3Q14644 834 aa15.32■□□□□ 0.04
LSM2-208ENST00000375661 ARHGEF6Q15052 776 aa15.32■□□□□ 0.04
LSM2-208ENST00000375661 ALDH1L2Q3SY69 923 aa15.32■□□□□ 0.04
LSM2-208ENST00000375661 SPDYE2Q495Y8 402 aa15.32■□□□□ 0.04
LSM2-208ENST00000375661 CD99L2Q8TCZ2 262 aa15.32■□□□□ 0.04
LSM2-208ENST00000375661 EFCC1Q9HA90 598 aa15.32■□□□□ 0.04
LSM2-208ENST00000375661 SERPINA10Q9UK55 444 aa15.32■□□□□ 0.04
LSM2-208ENST00000375661 CHMP3Q9Y3E7 222 aa15.32■□□□□ 0.04
LSM2-208ENST00000375661 GJA5P36382 358 aa15.31■□□□□ 0.04
LSM2-208ENST00000375661 RBM5P52756 815 aaKnown RBP eCLIP15.31■□□□□ 0.04
LSM2-208ENST00000375661 CCDC57Q2TAC2 916 aa15.31■□□□□ 0.04
LSM2-208ENST00000375661 LDHAL6AQ6ZMR3 332 aa15.31■□□□□ 0.04
LSM2-208ENST00000375661 PTPN18Q99952 460 aa15.31■□□□□ 0.04
LSM2-208ENST00000375661 KIAA0100Q14667 2235 aaKnown RBP15.31■□□□□ 0.04
LSM2-208ENST00000375661 UBE4AQ14139 1066 aa15.3■□□□□ 0.04
LSM2-208ENST00000375661 TAF7LQ5H9L4 462 aa15.3■□□□□ 0.04
LSM2-208ENST00000375661 HABP4Q5JVS0 413 aaKnown RBP15.3■□□□□ 0.04
LSM2-208ENST00000375661 BEND3Q5T5X7 828 aa15.3■□□□□ 0.04
LSM2-208ENST00000375661 TDRD7Q8NHU6 1098 aaKnown RBP15.3■□□□□ 0.04
LSM2-208ENST00000375661 OPTNQ96CV9 577 aa15.3■□□□□ 0.04
LSM2-208ENST00000375661 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms