RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 LIMCH1Q9UPQ0 1083 aa14.13□□□□□ -0.15
C9orf3-203ENST00000375315 BCL9LQ86UU0 1499 aa14.13□□□□□ -0.15
C9orf3-203ENST00000375315 DISP2A7MBM2 1401 aa14.13□□□□□ -0.15
C9orf3-203ENST00000375315 BCL9O00512 1426 aa14.13□□□□□ -0.15
C9orf3-203ENST00000375315 LRP6O75581 1613 aa14.13□□□□□ -0.15
C9orf3-203ENST00000375315 CCDC69A6NI79 296 aa14.13□□□□□ -0.15
C9orf3-203ENST00000375315 IFIT2P09913 472 aaKnown RBP14.13□□□□□ -0.15
C9orf3-203ENST00000375315 CHMLP26374 656 aa14.13□□□□□ -0.15
C9orf3-203ENST00000375315 OAS2P29728 719 aaKnown RBP14.13□□□□□ -0.15
C9orf3-203ENST00000375315 KRT85P78386 507 aa14.13□□□□□ -0.15
C9orf3-203ENST00000375315 TUBB4AP04350 444 aa14.12□□□□□ -0.15
C9orf3-203ENST00000375315 CLASRPQ8N2M8 674 aaKnown RBP14.12□□□□□ -0.15
C9orf3-203ENST00000375315 DEF6Q9H4E7 631 aa14.12□□□□□ -0.15
C9orf3-203ENST00000375315 TLR7Q9NYK1 1049 aaKnown RBP14.12□□□□□ -0.15
C9orf3-203ENST00000375315 TRMT112Q9UI30 125 aaKnown RBP14.12□□□□□ -0.15
C9orf3-203ENST00000375315 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.12□□□□□ -0.15
C9orf3-203ENST00000375315 PARP4Q9UKK3 1724 aaKnown RBP14.12□□□□□ -0.15
C9orf3-203ENST00000375315 TPM1P09493 284 aa14.12□□□□□ -0.15
C9orf3-203ENST00000375315 CASTP20810 708 aaKnown RBP14.12□□□□□ -0.15
C9orf3-203ENST00000375315 SARM1Q6SZW1 724 aa14.12□□□□□ -0.15
C9orf3-203ENST00000375315 PALLDQ8WX93 1383 aa14.12□□□□□ -0.15
C9orf3-203ENST00000375315 LIG1P18858 919 aa14.11□□□□□ -0.15
C9orf3-203ENST00000375315 FNBP4Q8N3X1 1017 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-203ENST00000375315 TEX13AQ9BXU3 409 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-203ENST00000375315 MTMR6Q9Y217 621 aa14.11□□□□□ -0.15
C9orf3-203ENST00000375315 IVLP07476 585 aa14.11□□□□□ -0.15
C9orf3-203ENST00000375315 EXOC4Q96A65 974 aa14.11□□□□□ -0.15
C9orf3-203ENST00000375315 TOMM22Q9NS69 142 aa14.11□□□□□ -0.15
C9orf3-203ENST00000375315 DACT1Q9NYF0 836 aa14.11□□□□□ -0.15
C9orf3-203ENST00000375315 PSD3Q9NYI0 1048 aa14.11□□□□□ -0.15
C9orf3-203ENST00000375315 PKD1L3Q7Z443 1732 aa14.11□□□□□ -0.15
C9orf3-203ENST00000375315 HSPA4P34932 840 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 CCZ1BP86790 482 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 CCZ1P86791 482 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-203ENST00000375315 ARID5BQ14865 1188 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 BARGINQ6ZT62 677 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 UBXN6Q9BZV1 441 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 DNAJC25Q9H1X3 360 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 BOLA2Q9H3K6 86 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 TNS2Q63HR2 1409 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 VPS37CA5D8V6 355 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-203ENST00000375315 MAGEA9P43362 315 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 TCIRG1Q13488 830 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 POLA2Q14181 598 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 IQUBQ8NA54 791 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 EDC3Q96F86 508 aaKnown RBP14.1□□□□□ -0.15
C9orf3-203ENST00000375315 PUS3Q9BZE2 481 aaKnown RBP14.1□□□□□ -0.15
C9orf3-203ENST00000375315 ORC3Q9UBD5 711 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-203ENST00000375315 ABCC6O95255 1503 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 SASH1O94885 1247 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 MYCNP04198 464 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-203ENST00000375315 TFCP2Q12800 502 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 SMC1AQ14683 1233 aaKnown RBP14.1□□□□□ -0.15
C9orf3-203ENST00000375315 CCDC93Q567U6 631 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 LEKR1Q6ZMV7 388 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 CCDC87Q9NVE4 849 aa14.1□□□□□ -0.15
C9orf3-203ENST00000375315 SLIT2O94813 1529 aa14.09□□□□□ -0.15
C9orf3-203ENST00000375315 PLEKHG2Q9H7P9 1386 aa14.09□□□□□ -0.15
C9orf3-203ENST00000375315 GJB2P29033 226 aa14.09□□□□□ -0.15
C9orf3-203ENST00000375315 LMAN1P49257 510 aa14.09□□□□□ -0.15
C9orf3-203ENST00000375315 GSDMDP57764 484 aa14.09□□□□□ -0.15
C9orf3-203ENST00000375315 RBM43Q6ZSC3 357 aaKnown RBP14.09□□□□□ -0.15
C9orf3-203ENST00000375315 TTC6Q86TZ1 520 aa14.09□□□□□ -0.15
C9orf3-203ENST00000375315 GPATCH11Q8N954 259 aa14.09□□□□□ -0.15
C9orf3-203ENST00000375315 MNS1Q8NEH6 495 aa14.09□□□□□ -0.15
C9orf3-203ENST00000375315 DRC1Q96MC2 740 aa14.09□□□□□ -0.15
C9orf3-203ENST00000375315 CLSTN2Q9H4D0 955 aa14.09□□□□□ -0.15
C9orf3-203ENST00000375315 ACTN2P35609 894 aa14.09□□□□□ -0.15
C9orf3-203ENST00000375315 AK2P54819 239 aa14.09□□□□□ -0.15
C9orf3-203ENST00000375315 LRRC24Q50LG9 513 aa14.09□□□□□ -0.15
C9orf3-203ENST00000375315 EAF2Q96CJ1 260 aaPredicted RBP14.09□□□□□ -0.15
C9orf3-203ENST00000375315 TRIM37O94972 964 aa14.08□□□□□ -0.15
C9orf3-203ENST00000375315 TIMM10P62072 90 aa14.08□□□□□ -0.15
C9orf3-203ENST00000375315 SPATA31A6Q5VVP1 1343 aa14.08□□□□□ -0.16
C9orf3-203ENST00000375315 KCPQ6ZWJ8 1503 aa14.08□□□□□ -0.16
C9orf3-203ENST00000375315 ATP2B1P20020 1258 aa14.08□□□□□ -0.16
C9orf3-203ENST00000375315 SRRTQ9BXP5 876 aaKnown RBP14.08□□□□□ -0.16
C9orf3-203ENST00000375315 SIPA1L3O60292 1781 aaPredicted RBP14.08□□□□□ -0.16
C9orf3-203ENST00000375315 NRDCO43847 1150 aa14.08□□□□□ -0.16
C9orf3-203ENST00000375315 ZCCHC17Q9NP64 241 aaKnown RBP14.08□□□□□ -0.16
C9orf3-203ENST00000375315 SRP68Q9UHB9 627 aaKnown RBP14.08□□□□□ -0.16
C9orf3-203ENST00000375315 MRC1P22897 1456 aa14.08□□□□□ -0.16
C9orf3-203ENST00000375315 PLCH1Q4KWH8 1693 aa14.07□□□□□ -0.16
C9orf3-203ENST00000375315 MAP3K15Q6ZN16 1313 aa14.07□□□□□ -0.16
C9orf3-203ENST00000375315 GNPATO15228 680 aa14.07□□□□□ -0.16
C9orf3-203ENST00000375315 INTS5Q6P9B9 1019 aaKnown RBP14.07□□□□□ -0.16
C9orf3-203ENST00000375315 CCDC91Q7Z6B0 441 aa14.07□□□□□ -0.16
C9orf3-203ENST00000375315 LINC00116Q8NCU8 138 aa14.07□□□□□ -0.16
C9orf3-203ENST00000375315 BANK1Q8NDB2 785 aa14.07□□□□□ -0.16
C9orf3-203ENST00000375315 HELBQ8NG08 1087 aaPredicted RBP14.07□□□□□ -0.16
C9orf3-203ENST00000375315 TTC14Q96N46 770 aa14.07□□□□□ -0.16
C9orf3-203ENST00000375315 CCNL1Q9UK58 526 aaPredicted RBP14.07□□□□□ -0.16
C9orf3-203ENST00000375315 TRPC5Q9UL62 973 aaPredicted RBP14.07□□□□□ -0.16
C9orf3-203ENST00000375315 NIP7Q9Y221 180 aaKnown RBP eCLIP14.07□□□□□ -0.16
C9orf3-203ENST00000375315 TOGARAM1Q9Y4F4 1720 aa14.07□□□□□ -0.16
C9orf3-203ENST00000375315 CCDC158Q5M9N0 1113 aa14.07□□□□□ -0.16
C9orf3-203ENST00000375315 GIGYF2Q6Y7W6 1299 aaKnown RBP14.07□□□□□ -0.16
C9orf3-203ENST00000375315 RUFY3Q7L099 469 aa14.07□□□□□ -0.16
C9orf3-203ENST00000375315 LRRN4CLQ8ND94 238 aa14.07□□□□□ -0.16
C9orf3-203ENST00000375315 SCAND2PQ9GZW5 306 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms