RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 LRSAM1Q6UWE0 723 aa9.68□□□□□ -0.86
UBR4-202ENST00000375224 TCEANC2Q96MN5 208 aa9.68□□□□□ -0.86
UBR4-202ENST00000375224 CGNQ9P2M7 1197 aaKnown RBP9.68□□□□□ -0.86
UBR4-202ENST00000375224 LAMB2P55268 1798 aa9.68□□□□□ -0.86
UBR4-202ENST00000375224 UBAP1LF5GYI3 381 aa9.67□□□□□ -0.86
UBR4-202ENST00000375224 FGFR2P21802 821 aa9.67□□□□□ -0.86
UBR4-202ENST00000375224 MCAMP43121 646 aa9.67□□□□□ -0.86
UBR4-202ENST00000375224 UBE3CQ15386 1083 aa9.67□□□□□ -0.86
UBR4-202ENST00000375224 FBXL16Q8N461 479 aa9.67□□□□□ -0.86
UBR4-202ENST00000375224 AGXT2Q9BYV1 514 aa9.67□□□□□ -0.86
UBR4-202ENST00000375224 COL5A3P25940 1745 aaPredicted RBP9.67□□□□□ -0.86
UBR4-202ENST00000375224 ARAP2Q8WZ64 1704 aa9.67□□□□□ -0.86
UBR4-202ENST00000375224 TCHHQ07283 1943 aa9.67□□□□□ -0.86
UBR4-202ENST00000375224 MYH14Q7Z406 1995 aaKnown RBP9.67□□□□□ -0.86
UBR4-202ENST00000375224 PFKFB2O60825 505 aa9.67□□□□□ -0.86
UBR4-202ENST00000375224 NTSR2O95665 410 aa9.67□□□□□ -0.86
UBR4-202ENST00000375224 HCLS1P14317 486 aaPredicted RBP9.67□□□□□ -0.86
UBR4-202ENST00000375224 NASPP49321 788 aaPredicted RBP9.67□□□□□ -0.86
UBR4-202ENST00000375224 EXOSC10Q01780 885 aaKnown RBP9.67□□□□□ -0.86
UBR4-202ENST00000375224 SCARF1Q14162 830 aa9.67□□□□□ -0.86
UBR4-202ENST00000375224 FAM98CQ17RN3 349 aaKnown RBP9.67□□□□□ -0.86
UBR4-202ENST00000375224 CCDC102BQ68D86 513 aa9.67□□□□□ -0.86
UBR4-202ENST00000375224 R3HCC1Q9Y3T6 440 aaKnown RBP9.67□□□□□ -0.86
UBR4-202ENST00000375224 AKAP11Q9UKA4 1901 aa9.67□□□□□ -0.86
UBR4-202ENST00000375224 LAMA4Q16363 1823 aa9.67□□□□□ -0.86
UBR4-202ENST00000375224 PTMAP06454 111 aaKnown RBP9.66□□□□□ -0.86
UBR4-202ENST00000375224 ADD2P35612 726 aa9.66□□□□□ -0.86
UBR4-202ENST00000375224 TERF1P54274 439 aa9.66□□□□□ -0.86
UBR4-202ENST00000375224 HMGN5P82970 282 aaKnown RBP9.66□□□□□ -0.86
UBR4-202ENST00000375224 STOX1Q6ZVD7 989 aa9.66□□□□□ -0.86
UBR4-202ENST00000375224 BRF1Q92994 677 aa9.66□□□□□ -0.86
UBR4-202ENST00000375224 CDC5LQ99459 802 aaKnown RBP9.66□□□□□ -0.86
UBR4-202ENST00000375224 TMEM63CQ9P1W3 806 aa9.66□□□□□ -0.86
UBR4-202ENST00000375224 CNTNAP4Q9C0A0 1308 aa9.66□□□□□ -0.86
UBR4-202ENST00000375224 KRT85P78386 507 aa9.66□□□□□ -0.86
UBR4-202ENST00000375224 STK3Q13188 491 aa9.66□□□□□ -0.86
UBR4-202ENST00000375224 FOXD4L6Q3SYB3 417 aaPredicted RBP9.66□□□□□ -0.86
UBR4-202ENST00000375224 FOXD4L3Q6VB84 417 aaPredicted RBP9.66□□□□□ -0.86
UBR4-202ENST00000375224 FNBP4Q8N3X1 1017 aaPredicted RBP9.66□□□□□ -0.86
UBR4-202ENST00000375224 ZNF274Q96GC6 653 aaPredicted RBP9.66□□□□□ -0.86
UBR4-202ENST00000375224 C8orf37Q96NL8 207 aa9.66□□□□□ -0.86
UBR4-202ENST00000375224 CNPY2Q9Y2B0 182 aa9.66□□□□□ -0.86
UBR4-202ENST00000375224 BCORQ6W2J9 1755 aa9.66□□□□□ -0.86
UBR4-202ENST00000375224 ATRNO75882 1429 aa9.66□□□□□ -0.86
UBR4-202ENST00000375224 CCDC173Q0VFZ6 552 aa9.66□□□□□ -0.86
UBR4-202ENST00000375224 RC3H1Q5TC82 1133 aaKnown RBP9.66□□□□□ -0.86
UBR4-202ENST00000375224 FAM184AQ8NB25 1140 aa9.66□□□□□ -0.86
UBR4-202ENST00000375224 CHAMP1Q96JM3 812 aa9.66□□□□□ -0.86
UBR4-202ENST00000375224 RBM27Q9P2N5 1060 aaKnown RBP9.66□□□□□ -0.86
UBR4-202ENST00000375224 DDX60Q8IY21 1712 aaKnown RBP9.65□□□□□ -0.86
UBR4-202ENST00000375224 GPAA1O43292 621 aa9.65□□□□□ -0.86
UBR4-202ENST00000375224 FAM193AP78312 1265 aa9.65□□□□□ -0.86
UBR4-202ENST00000375224 SLC9C2Q5TAH2 1124 aa9.65□□□□□ -0.86
UBR4-202ENST00000375224 SPATA31A6Q5VVP1 1343 aa9.65□□□□□ -0.86
UBR4-202ENST00000375224 WDR19Q8NEZ3 1342 aa9.65□□□□□ -0.86
UBR4-202ENST00000375224 BCL9LQ86UU0 1499 aa9.65□□□□□ -0.86
UBR4-202ENST00000375224 FAM177BA6PVY3 158 aa9.65□□□□□ -0.86
UBR4-202ENST00000375224 ZNF213O14771 459 aa9.65□□□□□ -0.86
UBR4-202ENST00000375224 KCNQ2O43526 872 aa9.65□□□□□ -0.86
UBR4-202ENST00000375224 MAP3K12Q12852 859 aa9.65□□□□□ -0.86
UBR4-202ENST00000375224 SLFNL1Q499Z3 407 aa9.65□□□□□ -0.86
UBR4-202ENST00000375224 RNF216Q9NWF9 866 aaPredicted RBP9.65□□□□□ -0.86
UBR4-202ENST00000375224 FGAP02671 866 aa9.65□□□□□ -0.87
UBR4-202ENST00000375224 MCM5P33992 734 aa9.65□□□□□ -0.87
UBR4-202ENST00000375224 PHKA1P46020 1223 aa9.65□□□□□ -0.87
UBR4-202ENST00000375224 CCDC183Q5T5S1 534 aa9.65□□□□□ -0.87
UBR4-202ENST00000375224 RALYLQ86SE5 291 aaKnown RBP9.65□□□□□ -0.87
UBR4-202ENST00000375224 NCOA7Q8NI08 942 aa9.65□□□□□ -0.87
UBR4-202ENST00000375224 SMARCC2Q8TAQ2 1214 aa9.65□□□□□ -0.87
UBR4-202ENST00000375224 CCDC94Q9BW85 323 aaPredicted RBP9.65□□□□□ -0.87
UBR4-202ENST00000375224 SCAND2PQ9GZW5 306 aaPredicted RBP9.65□□□□□ -0.87
UBR4-202ENST00000375224 PUS7LQ9H0K6 701 aaKnown RBP9.65□□□□□ -0.87
UBR4-202ENST00000375224 ZSCAN16Q9H4T2 348 aaPredicted RBP9.65□□□□□ -0.87
UBR4-202ENST00000375224 GDPD2Q9HCC8 539 aa9.65□□□□□ -0.87
UBR4-202ENST00000375224 H3BQV1 296 aa9.64□□□□□ -0.87
UBR4-202ENST00000375224 FIBPO43427 364 aa9.64□□□□□ -0.87
UBR4-202ENST00000375224 IDH1O75874 414 aaKnown RBP9.64□□□□□ -0.87
UBR4-202ENST00000375224 DNM1Q05193 864 aaKnown RBP9.64□□□□□ -0.87
UBR4-202ENST00000375224 TRDNQ13061 729 aa9.64□□□□□ -0.87
UBR4-202ENST00000375224 IFFO2Q5TF58 517 aa9.64□□□□□ -0.87
UBR4-202ENST00000375224 SPATA5Q8NB90 893 aa9.64□□□□□ -0.87
UBR4-202ENST00000375224 NSFL1CQ9UNZ2 370 aaKnown RBP9.64□□□□□ -0.87
UBR4-202ENST00000375224 UQCRHLA0A096LP55 91 aa9.64□□□□□ -0.87
UBR4-202ENST00000375224 SYCE3A1L190 88 aa9.64□□□□□ -0.87
UBR4-202ENST00000375224 DHX16O60231 1041 aaKnown RBP9.64□□□□□ -0.87
UBR4-202ENST00000375224 GADD45BO75293 160 aaPredicted RBP9.64□□□□□ -0.87
UBR4-202ENST00000375224 UQCRHP07919 91 aa9.64□□□□□ -0.87
UBR4-202ENST00000375224 COL9A3Q14050 684 aaPredicted RBP9.64□□□□□ -0.87
UBR4-202ENST00000375224 NYXQ9GZU5 481 aa9.64□□□□□ -0.87
UBR4-202ENST00000375224 ELP1O95163 1332 aa9.64□□□□□ -0.87
UBR4-202ENST00000375224 EVCP57679 992 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 SCRN1Q12765 414 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 SF3B3Q15393 1217 aaKnown RBP9.63□□□□□ -0.87
UBR4-202ENST00000375224 LINC00116Q8NCU8 138 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 TSPY26PQ9H489 355 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 SEC31BQ9NQW1 1179 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 ZMYM6O95789 1325 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 OFD1O75665 1012 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 PDE6AP16499 860 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 ZSCAN20P17040 1043 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms