RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 PDIA4P13667 645 aaKnown RBP16.68■□□□□ 0.26
NOTCH4-201ENST00000375023 CCDC114Q96M63 670 aa16.68■□□□□ 0.26
NOTCH4-201ENST00000375023 PRKAG2Q9UGJ0 569 aa16.68■□□□□ 0.26
NOTCH4-201ENST00000375023 PDE1AP54750 535 aa16.68■□□□□ 0.26
NOTCH4-201ENST00000375023 RRP36Q96EU6 259 aaKnown RBP16.68■□□□□ 0.26
NOTCH4-201ENST00000375023 TTC12Q9H892 705 aaPredicted RBP16.68■□□□□ 0.26
NOTCH4-201ENST00000375023 PTPN23Q9H3S7 1636 aa16.68■□□□□ 0.26
NOTCH4-201ENST00000375023 RHOXF2BP0C7M4 288 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 NCBP1Q09161 790 aaKnown RBP16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 SF3A3Q12874 501 aaKnown RBP eCLIP16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 CCDC155Q8N6L0 562 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 RHOXF2Q9BQY4 288 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 ESYT1Q9BSJ8 1104 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 MAPK8IP1Q9UQF2 711 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 NDC80O14777 642 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 HMG20BQ9P0W2 317 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 IRS4O14654 1257 aaPredicted RBP16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 ZNF174Q15697 407 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 TTC21BQ7Z4L5 1316 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 CCT6AP40227 531 aaKnown RBP16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 UAP1Q16222 522 aaPredicted RBP16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 IVNS1ABPQ9Y6Y0 642 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 RTL1A6NKG5 1358 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 RASA3Q14644 834 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 ATRIPQ8WXE1 791 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 C6orf50Q9HD87 102 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 RSPH14Q9UHP6 348 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 PCF11O94913 1555 aaKnown RBP16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 ZBTB24O43167 697 aaPredicted RBP16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 FAM160A1Q05DH4 1040 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 BMP2KLQ5H9B9 411 aa16.67■□□□□ 0.26
NOTCH4-201ENST00000375023 KRT2P35908 639 aa16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 CCDC6Q16204 474 aa16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 ZBTB33Q86T24 672 aa16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 CCDC117Q8IWD4 279 aaPredicted RBP16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 TLDC2A0PJX2 215 aa16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 IGSF3O75054 1194 aa16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 KMT5BQ4FZB7 885 aa16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 FCHSD1Q86WN1 690 aa16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 LARGE2Q8N3Y3 721 aa16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 TSPYL6Q8N831 410 aa16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 CKAP4Q07065 602 aaKnown RBP16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 MTHFSDQ2M296 383 aaKnown RBP16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 RAB3IL1Q8TBN0 382 aa16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 SMCR8Q8TEV9 937 aaPredicted RBP16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 TMOD4Q9NZQ9 345 aa16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 TRAPPC3LQ5T215 181 aa16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 SPECC1LQ69YQ0 1117 aa16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 MRPS27Q92552 414 aaKnown RBP16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 BICC1Q9H694 974 aaKnown RBP16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.66■□□□□ 0.26
NOTCH4-201ENST00000375023 NACA2Q9H009 215 aa16.65■□□□□ 0.26
NOTCH4-201ENST00000375023 IMPG2Q9BZV3 1241 aa16.65■□□□□ 0.26
NOTCH4-201ENST00000375023 ZSCAN16Q9H4T2 348 aaPredicted RBP16.65■□□□□ 0.26
NOTCH4-201ENST00000375023 NDUFB9Q9Y6M9 179 aa16.65■□□□□ 0.26
NOTCH4-201ENST00000375023 MAGI1Q96QZ7 1491 aaPredicted RBP16.65■□□□□ 0.26
NOTCH4-201ENST00000375023 KIF4AO95239 1232 aa16.65■□□□□ 0.26
NOTCH4-201ENST00000375023 ZGPATQ8N5A5 531 aaKnown RBP16.65■□□□□ 0.26
NOTCH4-201ENST00000375023 BBXQ8WY36 941 aaPredicted RBP16.65■□□□□ 0.26
NOTCH4-201ENST00000375023 CYLC1P35663 651 aaPredicted RBP16.65■□□□□ 0.26
NOTCH4-201ENST00000375023 VWA3AA6NCI4 1184 aa16.64■□□□□ 0.26
NOTCH4-201ENST00000375023 PAGR1Q9BTK6 254 aa16.64■□□□□ 0.26
NOTCH4-201ENST00000375023 HGSO14964 777 aaPredicted RBP16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 PPP2R5DQ14738 602 aa16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 IFI16Q16666 785 aaKnown RBP16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 CCDC65Q8IXS2 484 aa16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 TBC1D32Q96NH3 1257 aa16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 KCNK9Q9NPC2 374 aa16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 EFCAB5A4FU69 1503 aa16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 ERCC5P28715 1186 aaPredicted RBP16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 LETM2Q2VYF4 491 aa16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 CADPS2Q86UW7 1296 aa16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 KLHDC4Q8TBB5 520 aa16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 ABL1P00519 1130 aa16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 AK2P54819 239 aa16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 SELENOOQ9BVL4 669 aa16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 LRRC27Q9C0I9 530 aa16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 CFAP58Q5T655 872 aa16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 CTNND2Q9UQB3 1225 aa16.64■□□□□ 0.25
NOTCH4-201ENST00000375023 PSMA7O14818 248 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 PPP2R5CQ13362 524 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 DPY19L2Q6NUT2 758 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 TTC30BQ8N4P2 665 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 PPP1R21Q6ZMI0 780 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 CNNM2Q9H8M5 875 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 CCNL1Q9UK58 526 aaPredicted RBP16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 CTAGE15A4D2H0 777 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 ZEB2O60315 1214 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 CTAGE8P0CG41 777 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 KIF14Q15058 1648 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 CTAGE6Q86UF2 777 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 CTAGE4Q8IX94 777 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 NCAPD3P42695 1498 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 PPIP5K1Q6PFW1 1433 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 EIF4A2Q14240 407 aaKnown RBP16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 ZNF569Q5MCW4 686 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 ZBTB16Q05516 673 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms