RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 ZNF804BA4D1E1 1349 aa21.4■■□□□ 1.02
HLA-DQB1-201ENST00000374943 TCRBV5S4A2TA0A5A2 114 aa21.4■■□□□ 1.02
HLA-DQB1-201ENST00000374943 GPAA1O43292 621 aa21.4■■□□□ 1.02
HLA-DQB1-201ENST00000374943 SLC9C2Q5TAH2 1124 aa21.4■■□□□ 1.02
HLA-DQB1-201ENST00000374943 SNAP23O00161 211 aa21.39■■□□□ 1.01
HLA-DQB1-201ENST00000374943 PDE6AP16499 860 aa21.39■■□□□ 1.01
HLA-DQB1-201ENST00000374943 MCTP1Q6DN14 999 aa21.39■■□□□ 1.01
HLA-DQB1-201ENST00000374943 DHX32Q7L7V1 743 aaKnown RBP21.39■■□□□ 1.01
HLA-DQB1-201ENST00000374943 E7EWF7 191 aa21.38■■□□□ 1.01
HLA-DQB1-201ENST00000374943 IDH1O75874 414 aaKnown RBP21.38■■□□□ 1.01
HLA-DQB1-201ENST00000374943 PDIA4P13667 645 aaKnown RBP21.38■■□□□ 1.01
HLA-DQB1-201ENST00000374943 TCEANC2Q96MN5 208 aa21.38■■□□□ 1.01
HLA-DQB1-201ENST00000374943 AGXT2Q9BYV1 514 aa21.38■■□□□ 1.01
HLA-DQB1-201ENST00000374943 MINPP1Q9UNW1 487 aa21.38■■□□□ 1.01
HLA-DQB1-201ENST00000374943 HMGB2P26583 209 aaKnown RBP21.37■■□□□ 1.01
HLA-DQB1-201ENST00000374943 EXOSC10Q01780 885 aaKnown RBP21.37■■□□□ 1.01
HLA-DQB1-201ENST00000374943 CELF1Q92879 486 aaKnown RBP21.37■■□□□ 1.01
HLA-DQB1-201ENST00000374943 LMBRD1Q9NUN5 540 aa21.37■■□□□ 1.01
HLA-DQB1-201ENST00000374943 ZNF532Q9HCE3 1301 aa21.37■■□□□ 1.01
HLA-DQB1-201ENST00000374943 GJB2P29033 226 aa21.37■■□□□ 1.01
HLA-DQB1-201ENST00000374943 BCAMP50895 628 aa21.37■■□□□ 1.01
HLA-DQB1-201ENST00000374943 MAP3K12Q12852 859 aa21.37■■□□□ 1.01
HLA-DQB1-201ENST00000374943 IMMTQ16891 758 aaKnown RBP21.37■■□□□ 1.01
HLA-DQB1-201ENST00000374943 Q6ZUG5 572 aa21.37■■□□□ 1.01
HLA-DQB1-201ENST00000374943 FBXL16Q8N461 479 aa21.37■■□□□ 1.01
HLA-DQB1-201ENST00000374943 WWC3Q9ULE0 1092 aa21.37■■□□□ 1.01
HLA-DQB1-201ENST00000374943 STX6O43752 255 aa21.36■■□□□ 1.01
HLA-DQB1-201ENST00000374943 PHF14O94880 888 aa21.36■■□□□ 1.01
HLA-DQB1-201ENST00000374943 FGAP02671 866 aa21.36■■□□□ 1.01
HLA-DQB1-201ENST00000374943 SYT1P21579 422 aa21.36■■□□□ 1.01
HLA-DQB1-201ENST00000374943 RPS8P62241 208 aaKnown RBP21.36■■□□□ 1.01
HLA-DQB1-201ENST00000374943 KLHL40Q2TBA0 621 aa21.36■■□□□ 1.01
HLA-DQB1-201ENST00000374943 ZMYM6O95789 1325 aa21.36■■□□□ 1.01
HLA-DQB1-201ENST00000374943 ZSCAN22P10073 491 aaPredicted RBP21.35■■□□□ 1.01
HLA-DQB1-201ENST00000374943 TTLL5Q6EMB2 1281 aa21.35■■□□□ 1.01
HLA-DQB1-201ENST00000374943 TIAM2Q8IVF5 1701 aa21.35■■□□□ 1.01
HLA-DQB1-201ENST00000374943 NECAB1Q8N987 351 aa21.35■■□□□ 1.01
HLA-DQB1-201ENST00000374943 CACNA1SQ13698 1873 aa21.35■■□□□ 1.01
HLA-DQB1-201ENST00000374943 MAST2Q6P0Q8 1798 aa21.35■■□□□ 1.01
HLA-DQB1-201ENST00000374943 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.34■■□□□ 1.01
HLA-DQB1-201ENST00000374943 A0A0G2JLW4 131 aa21.34■■□□□ 1.01
HLA-DQB1-201ENST00000374943 NFIXQ14938 502 aa21.34■■□□□ 1.01
HLA-DQB1-201ENST00000374943 GTF3C6Q969F1 213 aa21.34■■□□□ 1.01
HLA-DQB1-201ENST00000374943 GNL3LQ9NVN8 582 aaKnown RBP21.34■■□□□ 1.01
HLA-DQB1-201ENST00000374943 ZBTB22O15209 634 aa21.34■■□□□ 1.01
HLA-DQB1-201ENST00000374943 TM4SF1P30408 202 aa21.34■■□□□ 1.01
HLA-DQB1-201ENST00000374943 ANKRD2Q9GZV1 360 aa21.34■■□□□ 1.01
HLA-DQB1-201ENST00000374943 CCDC88AQ3V6T2 1871 aa21.33■■□□□ 1.01
HLA-DQB1-201ENST00000374943 KIAA1551Q9HCM1 1747 aa21.33■■□□□ 1
HLA-DQB1-201ENST00000374943 ALX1Q15699 326 aa21.33■■□□□ 1
HLA-DQB1-201ENST00000374943 EP400Q96L91 3159 aa21.33■■□□□ 1
HLA-DQB1-201ENST00000374943 COL1A1P02452 1464 aaPredicted RBP21.33■■□□□ 1
HLA-DQB1-201ENST00000374943 WDR19Q8NEZ3 1342 aa21.32■■□□□ 1
HLA-DQB1-201ENST00000374943 FOXD4L5Q5VV16 416 aaPredicted RBP21.32■■□□□ 1
HLA-DQB1-201ENST00000374943 CCDC125Q86Z20 511 aa21.32■■□□□ 1
HLA-DQB1-201ENST00000374943 FOXD4L4Q8WXT5 416 aaPredicted RBP21.32■■□□□ 1
HLA-DQB1-201ENST00000374943 STRBPQ96SI9 672 aaKnown RBP21.32■■□□□ 1
HLA-DQB1-201ENST00000374943 PDS5AQ29RF7 1337 aaKnown RBP21.31■■□□□ 1
HLA-DQB1-201ENST00000374943 SEMA3EO15041 775 aa21.31■■□□□ 1
HLA-DQB1-201ENST00000374943 TRIM37O94972 964 aa21.31■■□□□ 1
HLA-DQB1-201ENST00000374943 PDCP20941 246 aa21.31■■□□□ 1
HLA-DQB1-201ENST00000374943 CAVIN4Q5BKX8 364 aa21.31■■□□□ 1
HLA-DQB1-201ENST00000374943 MAGEB6Q8N7X4 407 aa21.31■■□□□ 1
HLA-DQB1-201ENST00000374943 CNBD1Q8NA66 436 aa21.31■■□□□ 1
HLA-DQB1-201ENST00000374943 BRF1Q92994 677 aa21.31■■□□□ 1
HLA-DQB1-201ENST00000374943 AIDAQ96BJ3 306 aa21.31■■□□□ 1
HLA-DQB1-201ENST00000374943 PNPLA7Q6ZV29 1317 aa21.31■■□□□ 1
HLA-DQB1-201ENST00000374943 PFKFB2O60825 505 aa21.31■■□□□ 1
HLA-DQB1-201ENST00000374943 F13A1P00488 732 aa21.31■■□□□ 1
HLA-DQB1-201ENST00000374943 MTMR6Q9Y217 621 aa21.31■■□□□ 1
HLA-DQB1-201ENST00000374943 DDX49Q9Y6V7 483 aaKnown RBP21.31■■□□□ 1
HLA-DQB1-201ENST00000374943 RGPD3A6NKT7 1758 aaPredicted RBP21.3■■□□□ 1
HLA-DQB1-201ENST00000374943 RGPD4Q7Z3J3 1758 aa21.3■■□□□ 1
HLA-DQB1-201ENST00000374943 ZNF213O14771 459 aa21.3■■□□□ 1
HLA-DQB1-201ENST00000374943 GYS1P13807 737 aa21.3■■□□□ 1
HLA-DQB1-201ENST00000374943 FBXO33Q7Z6M2 555 aa21.3■■□□□ 1
HLA-DQB1-201ENST00000374943 MB21D2Q8IYB1 491 aaPredicted RBP21.3■■□□□ 1
HLA-DQB1-201ENST00000374943 GZF1Q9H116 711 aaPredicted RBP21.3■■□□□ 1
HLA-DQB1-201ENST00000374943 ISY1Q9ULR0 285 aaKnown RBP21.3■■□□□ 1
HLA-DQB1-201ENST00000374943 ATP6V1DQ9Y5K8 247 aa21.3■■□□□ 1
HLA-DQB1-201ENST00000374943 MYH15Q9Y2K3 1946 aa21.29■■□□□ 1
HLA-DQB1-201ENST00000374943 FSD2A1L4K1 749 aa21.29■■□□□ 1
HLA-DQB1-201ENST00000374943 PRPF40AO75400 957 aaKnown RBP21.29■■□□□ 1
HLA-DQB1-201ENST00000374943 GYG1P46976 350 aa21.29■■□□□ 1
HLA-DQB1-201ENST00000374943 EVCP57679 992 aa21.29■■□□□ 1
HLA-DQB1-201ENST00000374943 FGD1P98174 961 aa21.29■■□□□ 1
HLA-DQB1-201ENST00000374943 FAM84BQ96KN1 310 aaPredicted RBP21.29■■□□□ 1
HLA-DQB1-201ENST00000374943 LLPHQ9BRT6 129 aaKnown RBP21.29■■□□□ 1
HLA-DQB1-201ENST00000374943 DENND2AQ9ULE3 1009 aa21.29■■□□□ 1
HLA-DQB1-201ENST00000374943 GNAT2P19087 354 aa21.28■■□□□ 1
HLA-DQB1-201ENST00000374943 HAND2P61296 217 aa21.28■■□□□ 1
HLA-DQB1-201ENST00000374943 TMEM87AQ8NBN3 555 aa21.28■■□□□ 1
HLA-DQB1-201ENST00000374943 NCOA7Q8NI08 942 aa21.28■■□□□ 1
HLA-DQB1-201ENST00000374943 LRRC2Q9BYS8 371 aa21.28■■□□□ 1
HLA-DQB1-201ENST00000374943 NRXN2Q9P2S2 1712 aa21.28■■□□□ 1
HLA-DQB1-201ENST00000374943 PATL2C9JE40 543 aaKnown RBP21.28■■□□□ 1
HLA-DQB1-201ENST00000374943 NPHP1O15259 732 aa21.28■■□□□ 1
HLA-DQB1-201ENST00000374943 GRAPQ13588 217 aa21.28■■□□□ 1
HLA-DQB1-201ENST00000374943 PRR5LQ6MZQ0 368 aa21.28■■□□□ 1
HLA-DQB1-201ENST00000374943 CCDC24Q8N4L8 307 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms