RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 MORC2Q9Y6X9 1032 aaPredicted RBP12.96□□□□□ -0.34
CCDC40-203ENST00000374877 ME1P48163 572 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 GUCY1B3Q02153 619 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 TSGA10IPQ3SY00 556 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 ZNF772Q68DY9 489 aaPredicted RBP12.95□□□□□ -0.34
CCDC40-203ENST00000374877 XAGE3Q8WTP9 111 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 ANO10Q9NW15 660 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 ZNF831Q5JPB2 1677 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 NYAP1Q6ZVC0 841 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 A0A0G2JS52 829 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 NBPF26B4DH59 902 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 CCZ1BP86790 482 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 CCZ1P86791 482 aaPredicted RBP12.95□□□□□ -0.34
CCDC40-203ENST00000374877 NBPF14Q5TI25 921 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
CCDC40-203ENST00000374877 RIC3Q7Z5B4 369 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 CEP57L1Q8IYX8 460 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 NBPF15Q8N660 670 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 FSIP1Q8NA03 581 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 USP28Q96RU2 1077 aa12.95□□□□□ -0.34
CCDC40-203ENST00000374877 NHSQ6T4R5 1651 aa12.94□□□□□ -0.34
CCDC40-203ENST00000374877 CYP21A2P08686 494 aa12.94□□□□□ -0.34
CCDC40-203ENST00000374877 MYL6BP14649 208 aa12.94□□□□□ -0.34
CCDC40-203ENST00000374877 CCT2P78371 535 aaKnown RBP12.94□□□□□ -0.34
CCDC40-203ENST00000374877 FBXO38Q6PIJ6 1188 aa12.94□□□□□ -0.34
CCDC40-203ENST00000374877 COPS6Q7L5N1 327 aa12.94□□□□□ -0.34
CCDC40-203ENST00000374877 CCAR2Q8N163 923 aaKnown RBP12.94□□□□□ -0.34
CCDC40-203ENST00000374877 DHX40Q8IX18 779 aaKnown RBP12.94□□□□□ -0.34
CCDC40-203ENST00000374877 DNAJC10Q8IXB1 793 aa12.94□□□□□ -0.34
CCDC40-203ENST00000374877 FBXO41Q8TF61 875 aa12.94□□□□□ -0.34
CCDC40-203ENST00000374877 ACSBG1Q96GR2 724 aa12.94□□□□□ -0.34
CCDC40-203ENST00000374877 TJP1Q07157 1748 aa12.94□□□□□ -0.34
CCDC40-203ENST00000374877 COL15A1P39059 1388 aa12.94□□□□□ -0.34
CCDC40-203ENST00000374877 SLFN14P0C7P3 912 aa12.93□□□□□ -0.34
CCDC40-203ENST00000374877 SEPT12Q8IYM1 358 aa12.93□□□□□ -0.34
CCDC40-203ENST00000374877 ERO1AQ96HE7 468 aa12.93□□□□□ -0.34
CCDC40-203ENST00000374877 RCOR1Q9UKL0 485 aa12.93□□□□□ -0.34
CCDC40-203ENST00000374877 U3KPZ7 1027 aaPredicted RBP12.93□□□□□ -0.34
CCDC40-203ENST00000374877 PTPDC1A2A3K4 754 aa12.93□□□□□ -0.34
CCDC40-203ENST00000374877 ADD1P35611 737 aaKnown RBP12.93□□□□□ -0.34
CCDC40-203ENST00000374877 USPL1Q5W0Q7 1092 aa12.93□□□□□ -0.34
CCDC40-203ENST00000374877 ANKRD13DQ6ZTN6 518 aa12.93□□□□□ -0.34
CCDC40-203ENST00000374877 PLBD2Q8NHP8 589 aa12.93□□□□□ -0.34
CCDC40-203ENST00000374877 SDF4Q9BRK5 362 aa12.93□□□□□ -0.34
CCDC40-203ENST00000374877 SLU7O95391 586 aaKnown RBP12.93□□□□□ -0.34
CCDC40-203ENST00000374877 APOBRQ0VD83 1088 aa12.93□□□□□ -0.34
CCDC40-203ENST00000374877 SNW1Q13573 536 aaKnown RBP12.93□□□□□ -0.34
CCDC40-203ENST00000374877 ZRSR1Q15695 479 aaKnown RBP12.93□□□□□ -0.34
CCDC40-203ENST00000374877 SLC4A9Q96Q91 983 aa12.93□□□□□ -0.34
CCDC40-203ENST00000374877 METTL22Q9BUU2 404 aaPredicted RBP12.93□□□□□ -0.34
CCDC40-203ENST00000374877 DBNLQ9UJU6 430 aaKnown RBP12.93□□□□□ -0.34
CCDC40-203ENST00000374877 PALLDQ8WX93 1383 aa12.93□□□□□ -0.34
CCDC40-203ENST00000374877 CYP19A1P11511 503 aaPredicted RBP12.92□□□□□ -0.34
CCDC40-203ENST00000374877 FAM160A1Q05DH4 1040 aa12.92□□□□□ -0.34
CCDC40-203ENST00000374877 DDX46Q7L014 1031 aaKnown RBP12.92□□□□□ -0.34
CCDC40-203ENST00000374877 NSUN7Q8NE18 718 aaKnown RBP12.92□□□□□ -0.34
CCDC40-203ENST00000374877 SMC2O95347 1197 aa12.92□□□□□ -0.34
CCDC40-203ENST00000374877 ZNF396Q96N95 335 aaPredicted RBP12.92□□□□□ -0.34
CCDC40-203ENST00000374877 NAT10Q9H0A0 1025 aaKnown RBP12.92□□□□□ -0.34
CCDC40-203ENST00000374877 NCOA5Q9HCD5 579 aaKnown RBP12.92□□□□□ -0.34
CCDC40-203ENST00000374877 A1BGP04217 495 aa12.92□□□□□ -0.34
CCDC40-203ENST00000374877 NEXNQ0ZGT2 675 aa12.92□□□□□ -0.34
CCDC40-203ENST00000374877 TERF2Q15554 542 aa12.92□□□□□ -0.34
CCDC40-203ENST00000374877 EPHA10Q5JZY3 1008 aa12.92□□□□□ -0.34
CCDC40-203ENST00000374877 SMARCC2Q8TAQ2 1214 aa12.92□□□□□ -0.34
CCDC40-203ENST00000374877 UTYO14607 1347 aa12.91□□□□□ -0.34
CCDC40-203ENST00000374877 IGKV5-2P06315 115 aa12.91□□□□□ -0.34
CCDC40-203ENST00000374877 NAA16Q6N069 864 aaPredicted RBP12.91□□□□□ -0.34
CCDC40-203ENST00000374877 RREB1Q92766 1687 aa12.91□□□□□ -0.34
CCDC40-203ENST00000374877 GSDMDP57764 484 aa12.91□□□□□ -0.34
CCDC40-203ENST00000374877 TFCP2Q12800 502 aa12.91□□□□□ -0.34
CCDC40-203ENST00000374877 MCMDC2Q4G0Z9 681 aa12.91□□□□□ -0.34
CCDC40-203ENST00000374877 STOX1Q6ZVD7 989 aa12.91□□□□□ -0.34
CCDC40-203ENST00000374877 LOC102724428A0A0B4J2F2 783 aa12.91□□□□□ -0.34
CCDC40-203ENST00000374877 PFKFB2O60825 505 aa12.91□□□□□ -0.34
CCDC40-203ENST00000374877 ATP5JP18859 108 aa12.91□□□□□ -0.34
CCDC40-203ENST00000374877 SIK1P57059 783 aa12.91□□□□□ -0.34
CCDC40-203ENST00000374877 TAF3Q5VWG9 929 aa12.91□□□□□ -0.34
CCDC40-203ENST00000374877 LLPHQ9BRT6 129 aaKnown RBP12.91□□□□□ -0.34
CCDC40-203ENST00000374877 ST7Q9NRC1 585 aa12.91□□□□□ -0.34
CCDC40-203ENST00000374877 ZNF609O15014 1411 aa12.9□□□□□ -0.34
CCDC40-203ENST00000374877 A0A1B0GVL5 298 aa12.9□□□□□ -0.34
CCDC40-203ENST00000374877 ERICH4A6NGS2 130 aa12.9□□□□□ -0.34
CCDC40-203ENST00000374877 CTDNEP1O95476 244 aa12.9□□□□□ -0.34
CCDC40-203ENST00000374877 TMC6Q7Z403 805 aa12.9□□□□□ -0.34
CCDC40-203ENST00000374877 MYD88Q99836 296 aa12.9□□□□□ -0.34
CCDC40-203ENST00000374877 KCNQ2O43526 872 aa12.9□□□□□ -0.34
CCDC40-203ENST00000374877 SF3A1Q15459 793 aaKnown RBP12.9□□□□□ -0.34
CCDC40-203ENST00000374877 TNNI3KQ59H18 835 aa12.9□□□□□ -0.34
CCDC40-203ENST00000374877 SYT10Q6XYQ8 523 aa12.9□□□□□ -0.34
CCDC40-203ENST00000374877 ENGASEQ8NFI3 743 aa12.9□□□□□ -0.34
CCDC40-203ENST00000374877 DBNDD2Q9BQY9 259 aa12.9□□□□□ -0.34
CCDC40-203ENST00000374877 FPGT-TNNI3KV9GXZ4 949 aa12.9□□□□□ -0.34
CCDC40-203ENST00000374877 KIF2AO00139 706 aaPredicted RBP12.89□□□□□ -0.35
CCDC40-203ENST00000374877 ERCC6LQ2NKX8 1250 aa12.89□□□□□ -0.35
CCDC40-203ENST00000374877 SLFNL1Q499Z3 407 aa12.89□□□□□ -0.35
CCDC40-203ENST00000374877 DHX32Q7L7V1 743 aaKnown RBP12.89□□□□□ -0.35
CCDC40-203ENST00000374877 CHST3Q7LGC8 479 aa12.89□□□□□ -0.35
CCDC40-203ENST00000374877 MRPS27Q92552 414 aaKnown RBP12.89□□□□□ -0.35
CCDC40-203ENST00000374877 ARFGEF2Q9Y6D5 1785 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms