RNA–Protein interactions for RNA: ENST00000374866.7

COL5A2-201, Transcript of collagen type V alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A2, Length 6,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2-201ENST00000374866 VPS18Q9P253 973 aa12.69□□□□□ -0.38
COL5A2-201ENST00000374866 CEP83Q9Y592 693 aa12.69□□□□□ -0.38
COL5A2-201ENST00000374866 KMT5BQ4FZB7 885 aa12.69□□□□□ -0.38
COL5A2-201ENST00000374866 C4orf50Q6ZRC1 276 aa12.68□□□□□ -0.38
COL5A2-201ENST00000374866 PTPDC1A2A3K4 754 aa12.68□□□□□ -0.38
COL5A2-201ENST00000374866 CCDC172P0C7W6 258 aa12.68□□□□□ -0.38
COL5A2-201ENST00000374866 FMNL3Q8IVF7 1028 aa12.68□□□□□ -0.38
COL5A2-201ENST00000374866 RARSP54136 660 aaKnown RBP12.68□□□□□ -0.38
COL5A2-201ENST00000374866 TBC1D2Q9BYX2 928 aa12.68□□□□□ -0.38
COL5A2-201ENST00000374866 ECHDC1Q9NTX5 307 aa12.68□□□□□ -0.38
COL5A2-201ENST00000374866 RMND1Q9NWS8 449 aa12.68□□□□□ -0.38
COL5A2-201ENST00000374866 NOL3O60936 208 aaKnown RBP12.68□□□□□ -0.38
COL5A2-201ENST00000374866 LRRC9Q6ZRR7 1453 aa12.68□□□□□ -0.38
COL5A2-201ENST00000374866 AFG3L2Q9Y4W6 797 aa12.68□□□□□ -0.38
COL5A2-201ENST00000374866 GAS8O95995 478 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 POLD1P28340 1107 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 TCP10Q12799 353 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 ZNF174Q15697 407 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 TRIM7Q9C029 511 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 FOXD4Q12950 439 aaPredicted RBP12.67□□□□□ -0.38
COL5A2-201ENST00000374866 IFNL2Q8IZJ0 200 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 JDP2Q8WYK2 163 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 LRRC59Q96AG4 307 aaKnown RBP12.67□□□□□ -0.38
COL5A2-201ENST00000374866 NSRP1Q9H0G5 558 aaKnown RBP12.67□□□□□ -0.38
COL5A2-201ENST00000374866 PLEKHH2Q8IVE3 1493 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 KIF2AO00139 706 aaPredicted RBP12.67□□□□□ -0.38
COL5A2-201ENST00000374866 KRT2P35908 639 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 RNF169Q8NCN4 708 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.67□□□□□ -0.38
COL5A2-201ENST00000374866 ADGRL1O94910 1474 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 KRT19P08727 400 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 HPDP32754 393 aaPredicted RBP12.67□□□□□ -0.38
COL5A2-201ENST00000374866 ZNF569Q5MCW4 686 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 CCDC129Q6ZRS4 1044 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 USP48Q86UV5 1035 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 NEK11Q8NG66 645 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 SUPT6HQ7KZ85 1726 aaKnown RBP12.67□□□□□ -0.38
COL5A2-201ENST00000374866 SYT1P21579 422 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 COPS6Q7L5N1 327 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 EPRSP07814 1512 aaKnown RBP12.67□□□□□ -0.38
COL5A2-201ENST00000374866 CYLC1P35663 651 aaPredicted RBP12.67□□□□□ -0.38
COL5A2-201ENST00000374866 GSDMDP57764 484 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 KRT23Q9C075 422 aa12.67□□□□□ -0.38
COL5A2-201ENST00000374866 DDX19AQ9NUU7 478 aaKnown RBP12.67□□□□□ -0.38
COL5A2-201ENST00000374866 KIF14Q15058 1648 aa12.66□□□□□ -0.38
COL5A2-201ENST00000374866 GMNNO75496 209 aa12.66□□□□□ -0.38
COL5A2-201ENST00000374866 BSPRYQ5W0U4 402 aa12.66□□□□□ -0.38
COL5A2-201ENST00000374866 LEO1Q8WVC0 666 aaPredicted RBP12.66□□□□□ -0.38
COL5A2-201ENST00000374866 TRIM31Q9BZY9 425 aa12.66□□□□□ -0.38
COL5A2-201ENST00000374866 TRIM27P14373 513 aa12.66□□□□□ -0.38
COL5A2-201ENST00000374866 DNM1Q05193 864 aaKnown RBP12.66□□□□□ -0.38
COL5A2-201ENST00000374866 NLRP3Q96P20 1036 aa12.66□□□□□ -0.38
COL5A2-201ENST00000374866 CCNT1O60563 726 aaKnown RBP12.66□□□□□ -0.38
COL5A2-201ENST00000374866 ESR2Q92731 530 aa12.66□□□□□ -0.38
COL5A2-201ENST00000374866 MBIPQ9NS73 344 aa12.66□□□□□ -0.38
COL5A2-201ENST00000374866 CCDC170Q8IYT3 715 aa12.66□□□□□ -0.38
COL5A2-201ENST00000374866 GPHNQ9NQX3 736 aaPredicted RBP12.66□□□□□ -0.38
COL5A2-201ENST00000374866 CTAGE15A4D2H0 777 aa12.66□□□□□ -0.38
COL5A2-201ENST00000374866 NBPF7P0C2Y1 421 aaPredicted RBP12.66□□□□□ -0.38
COL5A2-201ENST00000374866 CTAGE8P0CG41 777 aa12.66□□□□□ -0.38
COL5A2-201ENST00000374866 KANK3Q6NY19 840 aa12.66□□□□□ -0.38
COL5A2-201ENST00000374866 CTAGE6Q86UF2 777 aa12.66□□□□□ -0.38
COL5A2-201ENST00000374866 DZIP3Q86Y13 1208 aaKnown RBP12.66□□□□□ -0.38
COL5A2-201ENST00000374866 CTAGE4Q8IX94 777 aa12.66□□□□□ -0.38
COL5A2-201ENST00000374866 CTAGE9A4FU28 777 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 PDE1CQ14123 709 aaPredicted RBP12.65□□□□□ -0.38
COL5A2-201ENST00000374866 LETM2Q2VYF4 491 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 PLVAPQ9BX97 442 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 ZC3H12CQ9C0D7 883 aaKnown RBP12.65□□□□□ -0.38
COL5A2-201ENST00000374866 LRRC27Q9C0I9 530 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 GRIN2AQ12879 1464 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 MAN1A1P33908 653 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 HSPA2P54652 639 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 TSTA3Q13630 321 aaPredicted RBP12.65□□□□□ -0.38
COL5A2-201ENST00000374866 TTC30BQ8N4P2 665 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 PLB1Q6P1J6 1458 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 GNL1P36915 607 aaPredicted RBP12.65□□□□□ -0.38
COL5A2-201ENST00000374866 CEP85LQ5SZL2 805 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 FNBP1Q96RU3 617 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 SPDYE16A6NNV3 312 aaPredicted RBP12.65□□□□□ -0.38
COL5A2-201ENST00000374866 POTEB2H3BUK9 544 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 CLGNO14967 610 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 GTF2A1P52655 376 aaPredicted RBP12.65□□□□□ -0.38
COL5A2-201ENST00000374866 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 CASC4Q6P4E1 433 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 VPS52Q8N1B4 723 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 RBM8AQ9Y5S9 174 aaKnown RBP12.65□□□□□ -0.38
COL5A2-201ENST00000374866 NMIQ13287 307 aaPredicted RBP12.65□□□□□ -0.38
COL5A2-201ENST00000374866 PICK1Q9NRD5 415 aa12.65□□□□□ -0.38
COL5A2-201ENST00000374866 VWA3AA6NCI4 1184 aa12.65□□□□□ -0.39
COL5A2-201ENST00000374866 ZCRB1Q8TBF4 217 aaKnown RBP12.65□□□□□ -0.39
COL5A2-201ENST00000374866 VIMP08670 466 aaKnown RBP12.64□□□□□ -0.39
COL5A2-201ENST00000374866 PTPROQ16827 1216 aa12.64□□□□□ -0.39
COL5A2-201ENST00000374866 USP37Q86T82 979 aa12.64□□□□□ -0.39
COL5A2-201ENST00000374866 SKILP12757 684 aa12.64□□□□□ -0.39
COL5A2-201ENST00000374866 CPLX4Q7Z7G2 160 aa12.64□□□□□ -0.39
COL5A2-201ENST00000374866 GTF3C6Q969F1 213 aa12.64□□□□□ -0.39
COL5A2-201ENST00000374866 CALCOCO1Q9P1Z2 691 aa12.64□□□□□ -0.39
COL5A2-201ENST00000374866 ATAD2Q6PL18 1390 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms