RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 SEC62Q99442 399 aaKnown RBP16.41■□□□□ 0.22
HMGCL-203ENST00000374490 PNPLA7Q6ZV29 1317 aa16.41■□□□□ 0.22
HMGCL-203ENST00000374490 RRP9O43818 475 aaKnown RBP16.41■□□□□ 0.22
HMGCL-203ENST00000374490 FBXL16Q8N461 479 aa16.41■□□□□ 0.22
HMGCL-203ENST00000374490 FAM200AQ8TCP9 573 aa16.41■□□□□ 0.22
HMGCL-203ENST00000374490 CLSTN2Q9H4D0 955 aa16.41■□□□□ 0.22
HMGCL-203ENST00000374490 CCNL1Q9UK58 526 aaPredicted RBP16.41■□□□□ 0.22
HMGCL-203ENST00000374490 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
HMGCL-203ENST00000374490 BTAF1O14981 1849 aa16.4■□□□□ 0.22
HMGCL-203ENST00000374490 MAST3O60307 1309 aa16.4■□□□□ 0.22
HMGCL-203ENST00000374490 GOLGA6L6A8MZA4 724 aa16.4■□□□□ 0.22
HMGCL-203ENST00000374490 CAVIN2O95810 425 aa16.4■□□□□ 0.22
HMGCL-203ENST00000374490 KCNQ4P56696 695 aa16.4■□□□□ 0.22
HMGCL-203ENST00000374490 TIMM10P62072 90 aa16.4■□□□□ 0.22
HMGCL-203ENST00000374490 EXOSC10Q01780 885 aaKnown RBP16.4■□□□□ 0.22
HMGCL-203ENST00000374490 COL9A3Q14050 684 aaPredicted RBP16.4■□□□□ 0.22
HMGCL-203ENST00000374490 LRRC24Q50LG9 513 aa16.4■□□□□ 0.22
HMGCL-203ENST00000374490 RBM43Q6ZSC3 357 aaKnown RBP16.4■□□□□ 0.22
HMGCL-203ENST00000374490 STOX1Q6ZVD7 989 aa16.4■□□□□ 0.22
HMGCL-203ENST00000374490 TNMDQ9H2S6 317 aa16.4■□□□□ 0.22
HMGCL-203ENST00000374490 NDUFB9Q9Y6M9 179 aa16.4■□□□□ 0.22
HMGCL-203ENST00000374490 CDHR2Q9BYE9 1310 aa16.39■□□□□ 0.21
HMGCL-203ENST00000374490 LOC102724428A0A0B4J2F2 783 aa16.39■□□□□ 0.21
HMGCL-203ENST00000374490 HSPD1P10809 573 aaKnown RBP16.39■□□□□ 0.21
HMGCL-203ENST00000374490 ATP6V1AP38606 617 aa16.39■□□□□ 0.21
HMGCL-203ENST00000374490 SIK1P57059 783 aa16.39■□□□□ 0.21
HMGCL-203ENST00000374490 SCRN1Q12765 414 aa16.39■□□□□ 0.21
HMGCL-203ENST00000374490 TTC39AQ5SRH9 613 aa16.39■□□□□ 0.21
HMGCL-203ENST00000374490 ZNF274Q96GC6 653 aaPredicted RBP16.39■□□□□ 0.21
HMGCL-203ENST00000374490 JAK2O60674 1132 aa16.38■□□□□ 0.21
HMGCL-203ENST00000374490 HMGB2P26583 209 aaKnown RBP16.38■□□□□ 0.21
HMGCL-203ENST00000374490 HSP90AB3PQ58FF7 597 aa16.38■□□□□ 0.21
HMGCL-203ENST00000374490 NSUN7Q8NE18 718 aaKnown RBP16.38■□□□□ 0.21
HMGCL-203ENST00000374490 ZBTB1Q9Y2K1 713 aa16.38■□□□□ 0.21
HMGCL-203ENST00000374490 ZNF831Q5JPB2 1677 aa16.38■□□□□ 0.21
HMGCL-203ENST00000374490 MAP3K15Q6ZN16 1313 aa16.38■□□□□ 0.21
HMGCL-203ENST00000374490 E7EWF7 191 aa16.37■□□□□ 0.21
HMGCL-203ENST00000374490 LIG1P18858 919 aa16.37■□□□□ 0.21
HMGCL-203ENST00000374490 IL6STP40189 918 aaPredicted RBP16.37■□□□□ 0.21
HMGCL-203ENST00000374490 TYRO3Q06418 890 aa16.37■□□□□ 0.21
HMGCL-203ENST00000374490 GORABQ5T7V8 394 aa16.37■□□□□ 0.21
HMGCL-203ENST00000374490 ZBTB38Q8NAP3 1195 aaPredicted RBP16.37■□□□□ 0.21
HMGCL-203ENST00000374490 BICD2Q8TD16 824 aa16.37■□□□□ 0.21
HMGCL-203ENST00000374490 PIBF1Q8WXW3 757 aa16.37■□□□□ 0.21
HMGCL-203ENST00000374490 ZNF396Q96N95 335 aaPredicted RBP16.37■□□□□ 0.21
HMGCL-203ENST00000374490 ANKRD36CQ5JPF3 1778 aa16.37■□□□□ 0.21
HMGCL-203ENST00000374490 CSF1RP07333 972 aa16.37■□□□□ 0.21
HMGCL-203ENST00000374490 TPRNQ4KMQ1 711 aa16.37■□□□□ 0.21
HMGCL-203ENST00000374490 TAF7LQ5H9L4 462 aa16.37■□□□□ 0.21
HMGCL-203ENST00000374490 SASS6Q6UVJ0 657 aa16.37■□□□□ 0.21
HMGCL-203ENST00000374490 RGS22Q8NE09 1264 aa16.37■□□□□ 0.21
HMGCL-203ENST00000374490 ZNF594Q96JF6 807 aaPredicted RBP16.37■□□□□ 0.21
HMGCL-203ENST00000374490 CCDC87Q9NVE4 849 aa16.37■□□□□ 0.21
HMGCL-203ENST00000374490 DACT1Q9NYF0 836 aa16.37■□□□□ 0.21
HMGCL-203ENST00000374490 R3HCC1Q9Y3T6 440 aaKnown RBP16.37■□□□□ 0.21
HMGCL-203ENST00000374490 WDR19Q8NEZ3 1342 aa16.36■□□□□ 0.21
HMGCL-203ENST00000374490 PTPDC1A2A3K4 754 aa16.36■□□□□ 0.21
HMGCL-203ENST00000374490 CTAGE5O15320 804 aa16.36■□□□□ 0.21
HMGCL-203ENST00000374490 EVCP57679 992 aa16.36■□□□□ 0.21
HMGCL-203ENST00000374490 FAM173BQ6P4H8 233 aa16.36■□□□□ 0.21
HMGCL-203ENST00000374490 TFIP11Q9UBB9 837 aaKnown RBP16.36■□□□□ 0.21
HMGCL-203ENST00000374490 MRVI1Q9Y6F6 885 aa16.36■□□□□ 0.21
HMGCL-203ENST00000374490 IFIT5Q13325 482 aaKnown RBP16.35■□□□□ 0.21
HMGCL-203ENST00000374490 IMMTQ16891 758 aaKnown RBP16.35■□□□□ 0.21
HMGCL-203ENST00000374490 ZSCAN25Q6NSZ9 544 aa16.35■□□□□ 0.21
HMGCL-203ENST00000374490 APPBP2Q92624 585 aa16.35■□□□□ 0.21
HMGCL-203ENST00000374490 COL5A3P25940 1745 aaPredicted RBP16.35■□□□□ 0.21
HMGCL-203ENST00000374490 SALL1Q9NSC2 1324 aa16.35■□□□□ 0.21
HMGCL-203ENST00000374490 CHGBP05060 677 aa16.34■□□□□ 0.21
HMGCL-203ENST00000374490 CRKLP46109 303 aaKnown RBP16.34■□□□□ 0.21
HMGCL-203ENST00000374490 APOBRQ0VD83 1088 aa16.34■□□□□ 0.21
HMGCL-203ENST00000374490 GIGYF2Q6Y7W6 1299 aaKnown RBP16.34■□□□□ 0.21
HMGCL-203ENST00000374490 DDX11Q96FC9 970 aa16.34■□□□□ 0.21
HMGCL-203ENST00000374490 XAGE2Q96GT9 111 aa16.34■□□□□ 0.21
HMGCL-203ENST00000374490 ZNF512BQ96KM6 892 aaPredicted RBP16.34■□□□□ 0.21
HMGCL-203ENST00000374490 PUS3Q9BZE2 481 aaKnown RBP16.34■□□□□ 0.21
HMGCL-203ENST00000374490 RCOR1Q9UKL0 485 aa16.34■□□□□ 0.21
HMGCL-203ENST00000374490 M0R2C6 588 aa16.34■□□□□ 0.21
HMGCL-203ENST00000374490 DHX16O60231 1041 aaKnown RBP16.34■□□□□ 0.21
HMGCL-203ENST00000374490 DTNBO60941 627 aa16.34■□□□□ 0.21
HMGCL-203ENST00000374490 DZIP3Q86Y13 1208 aaKnown RBP16.34■□□□□ 0.21
HMGCL-203ENST00000374490 PGBD1Q96JS3 809 aa16.34■□□□□ 0.21
HMGCL-203ENST00000374490 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.34■□□□□ 0.21
HMGCL-203ENST00000374490 NUP98P52948 1817 aa16.34■□□□□ 0.21
HMGCL-203ENST00000374490 PDIA3P30101 505 aaKnown RBP16.33■□□□□ 0.2
HMGCL-203ENST00000374490 FKBP4Q02790 459 aaKnown RBP eCLIP16.33■□□□□ 0.2
HMGCL-203ENST00000374490 ITPK1Q13572 414 aa16.33■□□□□ 0.2
HMGCL-203ENST00000374490 HSP90AA2PQ14568 343 aaPredicted RBP16.33■□□□□ 0.2
HMGCL-203ENST00000374490 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.33■□□□□ 0.2
HMGCL-203ENST00000374490 OSBP2Q969R2 916 aa16.33■□□□□ 0.2
HMGCL-203ENST00000374490 LRRC2Q9BYS8 371 aa16.33■□□□□ 0.2
HMGCL-203ENST00000374490 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
HMGCL-203ENST00000374490 CTDNEP1O95476 244 aa16.32■□□□□ 0.2
HMGCL-203ENST00000374490 TTF1Q15361 905 aaPredicted RBP16.32■□□□□ 0.2
HMGCL-203ENST00000374490 WASHC4Q2M389 1173 aa16.32■□□□□ 0.2
HMGCL-203ENST00000374490 TDRD7Q8NHU6 1098 aaKnown RBP16.32■□□□□ 0.2
HMGCL-203ENST00000374490 SPTLC3Q9NUV7 552 aa16.32■□□□□ 0.2
HMGCL-203ENST00000374490 LAMA4Q16363 1823 aa16.32■□□□□ 0.2
HMGCL-203ENST00000374490 RIC1Q4ADV7 1423 aa16.32■□□□□ 0.2
HMGCL-203ENST00000374490 DYNC1I1O14576 645 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms