RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 FCHSD1Q86WN1 690 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 NUTM2AQ8IVF1 878 aaPredicted RBP11.59□□□□□ -0.55
CD28-202ENST00000374481 UBAC1Q9BSL1 405 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 TANGO6Q9C0B7 1094 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 YIPF3Q9GZM5 350 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 LCMT1Q9UIC8 334 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 VAMP4O75379 141 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 ADKP55263 362 aaKnown RBP11.59□□□□□ -0.55
CD28-202ENST00000374481 PSME1Q06323 249 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 PLA2G4DQ86XP0 818 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 CCDC170Q8IYT3 715 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 IGSF22Q8N9C0 903 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 SELENOSQ9BQE4 189 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 RGS12O14924 1447 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 C9orf84Q5VXU9 1444 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 GCFC2P16383 781 aaKnown RBP11.58□□□□□ -0.56
CD28-202ENST00000374481 RANBP1P43487 201 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 NOP2P46087 812 aaKnown RBP11.58□□□□□ -0.56
CD28-202ENST00000374481 ZC3H6P61129 1189 aaKnown RBP11.58□□□□□ -0.56
CD28-202ENST00000374481 HDGFL1Q5TGJ6 251 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 C11orf57Q6ZUT1 292 aaPredicted RBP11.58□□□□□ -0.56
CD28-202ENST00000374481 AKR1B10O60218 316 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 TADA3O75528 432 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 MAP3K9P80192 1104 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 NBPF6Q5VWK0 638 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 ATL3Q6DD88 541 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 NBPF5PQ86XG9 351 aaPredicted RBP11.58□□□□□ -0.56
CD28-202ENST00000374481 NBPF4Q96M43 638 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 TSC22D3Q99576 134 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 KIF21AQ7Z4S6 1674 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 IDEP14735 1019 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 NLRP12P59046 1061 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 PPFIBP2Q8ND30 876 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 LRRC2Q9BYS8 371 aa11.58□□□□□ -0.56
CD28-202ENST00000374481 MAGI3Q5TCQ9 1506 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 H2AFXP16104 143 aaPredicted RBP11.57□□□□□ -0.56
CD28-202ENST00000374481 SF3B2Q13435 895 aaKnown RBP11.57□□□□□ -0.56
CD28-202ENST00000374481 SEPT14Q6ZU15 432 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 RPGRIP1Q96KN7 1286 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 U3KPZ7 1027 aaPredicted RBP11.57□□□□□ -0.56
CD28-202ENST00000374481 ENO4A6NNW6 628 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 PFDN1O60925 122 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 VIMP08670 466 aaKnown RBP11.57□□□□□ -0.56
CD28-202ENST00000374481 SCP2P22307 547 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 PDE6BP35913 854 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 SULT6B1Q6IMI4 303 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 CEP128Q6ZU80 1094 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 NCOA3Q9Y6Q9 1424 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 NUTM2FA1L443 756 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 ZFYP08048 801 aaPredicted RBP11.57□□□□□ -0.56
CD28-202ENST00000374481 TRIM21P19474 475 aaKnown RBP11.57□□□□□ -0.56
CD28-202ENST00000374481 GBP1P32455 592 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 RWDD2BP57060 319 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 SPAG1Q07617 926 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 TDRD12Q587J7 1177 aaKnown RBP11.57□□□□□ -0.56
CD28-202ENST00000374481 NUTM2GQ5VZR2 741 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 CAPRIN2Q6IMN6 1127 aaKnown RBP11.57□□□□□ -0.56
CD28-202ENST00000374481 KANK3Q6NY19 840 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 C8orf74Q6P047 294 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 TCP11Q8WWU5 503 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 NBPF3Q9H094 633 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 CEP131Q9UPN4 1083 aa11.57□□□□□ -0.56
CD28-202ENST00000374481 SARM1Q6SZW1 724 aa11.56□□□□□ -0.56
CD28-202ENST00000374481 ZNF365Q70YC5 407 aa11.56□□□□□ -0.56
CD28-202ENST00000374481 SUGP1Q8IWZ8 645 aaKnown RBP11.56□□□□□ -0.56
CD28-202ENST00000374481 TSPYL6Q8N831 410 aa11.56□□□□□ -0.56
CD28-202ENST00000374481 RHPN1Q8TCX5 695 aa11.56□□□□□ -0.56
CD28-202ENST00000374481 ACTR5Q9H9F9 607 aaPredicted RBP11.56□□□□□ -0.56
CD28-202ENST00000374481 HIP1RO75146 1068 aa11.56□□□□□ -0.56
CD28-202ENST00000374481 SF3A3Q12874 501 aaKnown RBP eCLIP11.56□□□□□ -0.56
CD28-202ENST00000374481 GKAP1Q5VSY0 366 aaPredicted RBP11.56□□□□□ -0.56
CD28-202ENST00000374481 KIAA0586Q9BVV6 1533 aa11.56□□□□□ -0.56
CD28-202ENST00000374481 STX10O60499 249 aa11.56□□□□□ -0.56
CD28-202ENST00000374481 UBE4AQ14139 1066 aa11.56□□□□□ -0.56
CD28-202ENST00000374481 CREB3L3Q68CJ9 461 aa11.56□□□□□ -0.56
CD28-202ENST00000374481 PRPF38AQ8NAV1 312 aaKnown RBP11.56□□□□□ -0.56
CD28-202ENST00000374481 KIAA1468Q9P260 1216 aa11.56□□□□□ -0.56
CD28-202ENST00000374481 KCTD16Q68DU8 428 aa11.56□□□□□ -0.56
CD28-202ENST00000374481 CACNA2D4Q7Z3S7 1137 aa11.56□□□□□ -0.56
CD28-202ENST00000374481 CCDC63Q8NA47 563 aa11.56□□□□□ -0.56
CD28-202ENST00000374481 KLC4Q9NSK0 619 aa11.56□□□□□ -0.56
CD28-202ENST00000374481 TLDC2A0PJX2 215 aa11.55□□□□□ -0.56
CD28-202ENST00000374481 CETN3O15182 167 aa11.55□□□□□ -0.56
CD28-202ENST00000374481 PPP1R12BO60237 982 aaPredicted RBP11.55□□□□□ -0.56
CD28-202ENST00000374481 HIBCHQ6NVY1 386 aaPredicted RBP11.55□□□□□ -0.56
CD28-202ENST00000374481 Q6ZUG5 572 aa11.55□□□□□ -0.56
CD28-202ENST00000374481 RAB11FIP4Q86YS3 637 aa11.55□□□□□ -0.56
CD28-202ENST00000374481 GBP5Q96PP8 586 aa11.55□□□□□ -0.56
CD28-202ENST00000374481 SAR1BQ9Y6B6 198 aa11.55□□□□□ -0.56
CD28-202ENST00000374481 ANKRD62A6NC57 917 aa11.55□□□□□ -0.56
CD28-202ENST00000374481 STX17P56962 302 aa11.55□□□□□ -0.56
CD28-202ENST00000374481 FAM114A1Q8IWE2 563 aa11.55□□□□□ -0.56
CD28-202ENST00000374481 CCDC155Q8N6L0 562 aa11.55□□□□□ -0.56
CD28-202ENST00000374481 ABCA5Q8WWZ7 1642 aa11.55□□□□□ -0.56
CD28-202ENST00000374481 SH2D4BQ5SQS7 431 aa11.55□□□□□ -0.56
CD28-202ENST00000374481 TMTC1Q8IUR5 882 aa11.55□□□□□ -0.56
CD28-202ENST00000374481 POLE2P56282 527 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 PDCD2Q16342 344 aaPredicted RBP11.54□□□□□ -0.56
CD28-202ENST00000374481 GNPTABQ3T906 1256 aa11.54□□□□□ -0.56
CD28-202ENST00000374481 LONRF3Q496Y0 759 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms