RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 NLRP3Q96P20 1036 aa15.74■□□□□ 0.11
CLIC4-201ENST00000374379 FGAP02671 866 aa15.74■□□□□ 0.11
CLIC4-201ENST00000374379 CTSWP56202 376 aa15.74■□□□□ 0.11
CLIC4-201ENST00000374379 FAM200AQ8TCP9 573 aa15.74■□□□□ 0.11
CLIC4-201ENST00000374379 C6orf229H3BNL8 230 aa15.73■□□□□ 0.11
CLIC4-201ENST00000374379 GNPATO15228 680 aa15.73■□□□□ 0.11
CLIC4-201ENST00000374379 FTOQ9C0B1 505 aaKnown RBP eCLIP15.73■□□□□ 0.11
CLIC4-201ENST00000374379 SEC31BQ9NQW1 1179 aa15.73■□□□□ 0.11
CLIC4-201ENST00000374379 TSPY2A6NKD2 308 aa15.73■□□□□ 0.11
CLIC4-201ENST00000374379 NAA16Q6N069 864 aaPredicted RBP15.73■□□□□ 0.11
CLIC4-201ENST00000374379 KLHL34Q8N239 644 aa15.73■□□□□ 0.11
CLIC4-201ENST00000374379 CNNM3Q8NE01 707 aa15.73■□□□□ 0.11
CLIC4-201ENST00000374379 GTF3C6Q969F1 213 aa15.73■□□□□ 0.11
CLIC4-201ENST00000374379 CCDC87Q9NVE4 849 aa15.73■□□□□ 0.11
CLIC4-201ENST00000374379 TFCP2L1Q9NZI6 479 aa15.73■□□□□ 0.11
CLIC4-201ENST00000374379 ZKSCAN5Q9Y2L8 839 aa15.73■□□□□ 0.11
CLIC4-201ENST00000374379 TAF6LQ9Y6J9 622 aa15.73■□□□□ 0.11
CLIC4-201ENST00000374379 CEMIPQ8WUJ3 1361 aa15.73■□□□□ 0.11
CLIC4-201ENST00000374379 hCG_1642624A0A1W2PR95 340 aa15.72■□□□□ 0.11
CLIC4-201ENST00000374379 PUM3Q15397 648 aaKnown RBP15.72■□□□□ 0.11
CLIC4-201ENST00000374379 CMTR1Q8N1G2 835 aaKnown RBP15.72■□□□□ 0.11
CLIC4-201ENST00000374379 CTCFLQ8NI51 663 aaPredicted RBP15.72■□□□□ 0.11
CLIC4-201ENST00000374379 DHX8Q14562 1220 aaKnown RBP15.72■□□□□ 0.11
CLIC4-201ENST00000374379 PDIA6Q15084 440 aa15.72■□□□□ 0.11
CLIC4-201ENST00000374379 GIGYF2Q6Y7W6 1299 aaKnown RBP15.72■□□□□ 0.11
CLIC4-201ENST00000374379 OSBP2Q969R2 916 aa15.72■□□□□ 0.11
CLIC4-201ENST00000374379 A0A087WWV3 80 aa15.72■□□□□ 0.11
CLIC4-201ENST00000374379 BCAMP50895 628 aa15.72■□□□□ 0.11
CLIC4-201ENST00000374379 RBM5P52756 815 aaKnown RBP eCLIP15.72■□□□□ 0.11
CLIC4-201ENST00000374379 AK7Q96M32 723 aa15.72■□□□□ 0.11
CLIC4-201ENST00000374379 RNF41Q9H4P4 317 aaPredicted RBP15.72■□□□□ 0.11
CLIC4-201ENST00000374379 STX8Q9UNK0 236 aa15.72■□□□□ 0.11
CLIC4-201ENST00000374379 VAT1LQ9HCJ6 419 aa15.72■□□□□ 0.11
CLIC4-201ENST00000374379 PCCAP05165 728 aaPredicted RBP15.71■□□□□ 0.11
CLIC4-201ENST00000374379 SCRN1Q12765 414 aa15.71■□□□□ 0.11
CLIC4-201ENST00000374379 CCDC102BQ68D86 513 aa15.71■□□□□ 0.11
CLIC4-201ENST00000374379 MRPS27Q92552 414 aaKnown RBP15.71■□□□□ 0.11
CLIC4-201ENST00000374379 WASF1Q92558 559 aa15.71■□□□□ 0.11
CLIC4-201ENST00000374379 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.71■□□□□ 0.112e-7■■■□□ 17.3
CLIC4-201ENST00000374379 MAST3O60307 1309 aa15.71■□□□□ 0.11
CLIC4-201ENST00000374379 MAP3K15Q6ZN16 1313 aa15.71■□□□□ 0.11
CLIC4-201ENST00000374379 CCDC196A0A1B0GTZ2 297 aa15.71■□□□□ 0.11
CLIC4-201ENST00000374379 SPTLC2O15270 562 aa15.71■□□□□ 0.11
CLIC4-201ENST00000374379 TPM2P07951 284 aa15.71■□□□□ 0.11
CLIC4-201ENST00000374379 TPM1P09493 284 aa15.71■□□□□ 0.11
CLIC4-201ENST00000374379 RTN1Q16799 776 aa15.71■□□□□ 0.11
CLIC4-201ENST00000374379 ADD1P35611 737 aaKnown RBP15.71■□□□□ 0.1
CLIC4-201ENST00000374379 AOPEPQ8N6M6 819 aa15.71■□□□□ 0.1
CLIC4-201ENST00000374379 KAZALD1Q96I82 304 aa15.71■□□□□ 0.1
CLIC4-201ENST00000374379 F8W031 263 aaPredicted RBP15.7■□□□□ 0.1
CLIC4-201ENST00000374379 H7C1W4 665 aa15.7■□□□□ 0.1
CLIC4-201ENST00000374379 M0R2C6 588 aa15.7■□□□□ 0.1
CLIC4-201ENST00000374379 SPECC1Q5M775 1068 aa15.7■□□□□ 0.1
CLIC4-201ENST00000374379 CATIPQ7Z7H3 387 aa15.7■□□□□ 0.1
CLIC4-201ENST00000374379 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.7■□□□□ 0.1
CLIC4-201ENST00000374379 TOM1O60784 492 aa15.7■□□□□ 0.1
CLIC4-201ENST00000374379 RPGRQ92834 1020 aaKnown RBP15.7■□□□□ 0.1
CLIC4-201ENST00000374379 PTGS1P23219 599 aa15.7■□□□□ 0.1
CLIC4-201ENST00000374379 GYG1P46976 350 aa15.7■□□□□ 0.1
CLIC4-201ENST00000374379 STX1AQ16623 288 aa15.7■□□□□ 0.1
CLIC4-201ENST00000374379 SMIM5Q71RC9 77 aa15.7■□□□□ 0.1
CLIC4-201ENST00000374379 ZSCAN29Q8IWY8 852 aaPredicted RBP15.7■□□□□ 0.1
CLIC4-201ENST00000374379 MAGEB6P1A0A0J9YX57 407 aa15.7■□□□□ 0.1
CLIC4-201ENST00000374379 SYKP43405 635 aa15.7■□□□□ 0.1
CLIC4-201ENST00000374379 TSR1Q2NL82 804 aaKnown RBP15.7■□□□□ 0.1
CLIC4-201ENST00000374379 LPIN2Q92539 896 aa15.7■□□□□ 0.1
CLIC4-201ENST00000374379 PUS7LQ9H0K6 701 aaKnown RBP15.7■□□□□ 0.1
CLIC4-201ENST00000374379 SPATA5Q8NB90 893 aa15.69■□□□□ 0.1
CLIC4-201ENST00000374379 ANKRD20A12PQ8NF67 263 aa15.69■□□□□ 0.1
CLIC4-201ENST00000374379 NOL7Q9UMY1 257 aaKnown RBP15.69■□□□□ 0.1
CLIC4-201ENST00000374379 EPB41L2O43491 1005 aaKnown RBP15.69■□□□□ 0.1
CLIC4-201ENST00000374379 NR1I2O75469 434 aa15.69■□□□□ 0.1
CLIC4-201ENST00000374379 NLRP10Q86W26 655 aa15.69■□□□□ 0.1
CLIC4-201ENST00000374379 LMOD1P29536 600 aaPredicted RBP15.69■□□□□ 0.1
CLIC4-201ENST00000374379 NLRP5P59047 1200 aa15.69■□□□□ 0.1
CLIC4-201ENST00000374379 UVSSAQ2YD98 709 aa15.69■□□□□ 0.1
CLIC4-201ENST00000374379 USP28Q96RU2 1077 aa15.69■□□□□ 0.1
CLIC4-201ENST00000374379 DSCC1Q9BVC3 393 aa15.69■□□□□ 0.1
CLIC4-201ENST00000374379 LOC102724428A0A0B4J2F2 783 aa15.68■□□□□ 0.1
CLIC4-201ENST00000374379 SIK1P57059 783 aa15.68■□□□□ 0.1
CLIC4-201ENST00000374379 ANGEL1Q9UNK9 670 aaKnown RBP15.68■□□□□ 0.1
CLIC4-201ENST00000374379 ERBB4Q15303 1308 aa15.68■□□□□ 0.1
CLIC4-201ENST00000374379 IFIT1BQ5T764 474 aaKnown RBP15.68■□□□□ 0.1
CLIC4-201ENST00000374379 SDR42E1Q8WUS8 393 aa15.68■□□□□ 0.1
CLIC4-201ENST00000374379 ATG3Q9NT62 314 aa15.68■□□□□ 0.1
CLIC4-201ENST00000374379 GJB4Q9NTQ9 266 aa15.68■□□□□ 0.1
CLIC4-201ENST00000374379 CTAGE5O15320 804 aa15.68■□□□□ 0.1
CLIC4-201ENST00000374379 PDE6AP16499 860 aa15.68■□□□□ 0.1
CLIC4-201ENST00000374379 ZMYM1Q5SVZ6 1142 aa15.68■□□□□ 0.1
CLIC4-201ENST00000374379 TMC6Q7Z403 805 aa15.68■□□□□ 0.1
CLIC4-201ENST00000374379 ZNF444Q8N0Y2 327 aaPredicted RBP15.68■□□□□ 0.1
CLIC4-201ENST00000374379 ESR2Q92731 530 aa15.68■□□□□ 0.1
CLIC4-201ENST00000374379 SMARCC1Q92922 1105 aaPredicted RBP15.68■□□□□ 0.1
CLIC4-201ENST00000374379 CRKLP46109 303 aaKnown RBP15.67■□□□□ 0.1
CLIC4-201ENST00000374379 TMX1Q9H3N1 280 aa15.67■□□□□ 0.1
CLIC4-201ENST00000374379 PXDNQ92626 1479 aa15.67■□□□□ 0.1
CLIC4-201ENST00000374379 PDE8BO95263 885 aa15.67■□□□□ 0.1
CLIC4-201ENST00000374379 KRT23Q9C075 422 aa15.67■□□□□ 0.1
CLIC4-201ENST00000374379 AFMP43652 599 aa15.67■□□□□ 0.1
CLIC4-201ENST00000374379 NOLC1Q14978 699 aaKnown RBP eCLIP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms