RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 PLCB2Q00722 1185 aa17.58■□□□□ 0.41
UBXN11-204ENST00000374217 IFIT5Q13325 482 aaKnown RBP17.58■□□□□ 0.41
UBXN11-204ENST00000374217 FOXD4L6Q3SYB3 417 aaPredicted RBP17.58■□□□□ 0.41
UBXN11-204ENST00000374217 FOXD4L3Q6VB84 417 aaPredicted RBP17.58■□□□□ 0.41
UBXN11-204ENST00000374217 PLA2G4DQ86XP0 818 aa17.58■□□□□ 0.41
UBXN11-204ENST00000374217 CNBD1Q8NA66 436 aa17.58■□□□□ 0.41
UBXN11-204ENST00000374217 TTLL11Q8NHH1 800 aa17.58■□□□□ 0.41
UBXN11-204ENST00000374217 TDRD7Q8NHU6 1098 aaKnown RBP17.58■□□□□ 0.41
UBXN11-204ENST00000374217 SCAND2PQ9GZW5 306 aaPredicted RBP17.58■□□□□ 0.41
UBXN11-204ENST00000374217 PA2G4Q9UQ80 394 aaKnown RBP17.58■□□□□ 0.41
UBXN11-204ENST00000374217 SPDYE4A6NLX3 237 aa17.58■□□□□ 0.4
UBXN11-204ENST00000374217 CSF1RP07333 972 aa17.58■□□□□ 0.4
UBXN11-204ENST00000374217 TM4SF1P30408 202 aa17.58■□□□□ 0.4
UBXN11-204ENST00000374217 TYRO3Q06418 890 aa17.58■□□□□ 0.4
UBXN11-204ENST00000374217 SLFNL1Q499Z3 407 aa17.58■□□□□ 0.4
UBXN11-204ENST00000374217 RNF20Q5VTR2 975 aa17.58■□□□□ 0.4
UBXN11-204ENST00000374217 KLHDC4Q8TBB5 520 aa17.58■□□□□ 0.4
UBXN11-204ENST00000374217 SIL1Q9H173 461 aa17.58■□□□□ 0.4
UBXN11-204ENST00000374217 SERPINB2P05120 415 aa17.57■□□□□ 0.4
UBXN11-204ENST00000374217 GJB2P29033 226 aa17.57■□□□□ 0.4
UBXN11-204ENST00000374217 CCDC152Q4G0S7 254 aa17.57■□□□□ 0.4
UBXN11-204ENST00000374217 ZNF771Q7L3S4 317 aaPredicted RBP17.57■□□□□ 0.4
UBXN11-204ENST00000374217 ERC1Q8IUD2 1116 aa17.57■□□□□ 0.4
UBXN11-204ENST00000374217 MPNDQ8N594 471 aa17.57■□□□□ 0.4
UBXN11-204ENST00000374217 COPRSQ9NQ92 184 aa17.57■□□□□ 0.4
UBXN11-204ENST00000374217 MRVI1Q9Y6F6 885 aa17.57■□□□□ 0.4
UBXN11-204ENST00000374217 TTC41PQ6P2S7 1318 aa17.57■□□□□ 0.4
UBXN11-204ENST00000374217 ANKRD18BA2A2Z9 1011 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 TNNT1P13805 278 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 PTGS1P23219 599 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 ST5P78524 1137 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 DNM1Q05193 864 aaKnown RBP17.56■□□□□ 0.4
UBXN11-204ENST00000374217 NLRP3Q96P20 1036 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 LRP5O75197 1615 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 COL24A1Q17RW2 1714 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 KIF2AO00139 706 aaPredicted RBP17.56■□□□□ 0.4
UBXN11-204ENST00000374217 RFX5P48382 616 aaPredicted RBP17.56■□□□□ 0.4
UBXN11-204ENST00000374217 ZNF75DP51815 510 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 FGD1P98174 961 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 PTPN12Q05209 780 aaKnown RBP17.56■□□□□ 0.4
UBXN11-204ENST00000374217 SLC10A5Q5PT55 438 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 TSHZ3Q63HK5 1081 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 MSL1Q68DK7 614 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 SPC24Q8NBT2 197 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 ZNF397Q8NF99 534 aaPredicted RBP17.56■□□□□ 0.4
UBXN11-204ENST00000374217 PI4K2BQ8TCG2 481 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 KIF1BPQ96EK5 621 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 GREM2Q9H772 168 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 KCND1Q9NSA2 647 aa17.56■□□□□ 0.4
UBXN11-204ENST00000374217 MYH3P11055 1940 aa17.55■□□□□ 0.4
UBXN11-204ENST00000374217 ITGA6P23229 1130 aa17.55■□□□□ 0.4
UBXN11-204ENST00000374217 ZSCAN25Q6NSZ9 544 aa17.55■□□□□ 0.4
UBXN11-204ENST00000374217 KRT222Q8N1A0 295 aa17.55■□□□□ 0.4
UBXN11-204ENST00000374217 CCDC24Q8N4L8 307 aa17.55■□□□□ 0.4
UBXN11-204ENST00000374217 ZSWIM6Q9HCJ5 1215 aa17.55■□□□□ 0.4
UBXN11-204ENST00000374217 CYP46A1Q9Y6A2 500 aa17.55■□□□□ 0.4
UBXN11-204ENST00000374217 PARP3Q9Y6F1 533 aa17.55■□□□□ 0.4
UBXN11-204ENST00000374217 POLRMTO00411 1230 aaKnown RBP17.54■□□□□ 0.4
UBXN11-204ENST00000374217 DDR1Q08345 913 aa17.54■□□□□ 0.4
UBXN11-204ENST00000374217 SARM1Q6SZW1 724 aa17.54■□□□□ 0.4
UBXN11-204ENST00000374217 CCDC186Q7Z3E2 898 aa17.54■□□□□ 0.4
UBXN11-204ENST00000374217 KIF18AQ8NI77 898 aa17.54■□□□□ 0.4
UBXN11-204ENST00000374217 RHPN1Q8TCX5 695 aa17.54■□□□□ 0.4
UBXN11-204ENST00000374217 MMP10P09238 476 aa17.54■□□□□ 0.4
UBXN11-204ENST00000374217 PRR5LQ6MZQ0 368 aa17.54■□□□□ 0.4
UBXN11-204ENST00000374217 ZNF594Q96JF6 807 aaPredicted RBP17.54■□□□□ 0.4
UBXN11-204ENST00000374217 ALDH8A1Q9H2A2 487 aaPredicted RBP17.54■□□□□ 0.4
UBXN11-204ENST00000374217 TNMDQ9H2S6 317 aa17.54■□□□□ 0.4
UBXN11-204ENST00000374217 PDRG1Q9NUG6 133 aa17.54■□□□□ 0.4
UBXN11-204ENST00000374217 QSER1Q2KHR3 1735 aa17.53■□□□□ 0.4
UBXN11-204ENST00000374217 ABCC12Q96J65 1359 aa17.53■□□□□ 0.4
UBXN11-204ENST00000374217 CASTP20810 708 aaKnown RBP17.53■□□□□ 0.4
UBXN11-204ENST00000374217 CLSTN2Q9H4D0 955 aa17.53■□□□□ 0.4
UBXN11-204ENST00000374217 FAM53CQ9NYF3 392 aa17.53■□□□□ 0.4
UBXN11-204ENST00000374217 DDX60Q8IY21 1712 aaKnown RBP17.53■□□□□ 0.4
UBXN11-204ENST00000374217 LAMB2P55268 1798 aa17.52■□□□□ 0.4
UBXN11-204ENST00000374217 GLRX3O76003 335 aaKnown RBP17.52■□□□□ 0.4
UBXN11-204ENST00000374217 SLFN14P0C7P3 912 aa17.52■□□□□ 0.4
UBXN11-204ENST00000374217 DHX8Q14562 1220 aaKnown RBP17.52■□□□□ 0.4
UBXN11-204ENST00000374217 ANKRD1Q15327 319 aa17.52■□□□□ 0.4
UBXN11-204ENST00000374217 SF3B3Q15393 1217 aaKnown RBP17.52■□□□□ 0.4
UBXN11-204ENST00000374217 IL25Q9H293 177 aa17.52■□□□□ 0.4
UBXN11-204ENST00000374217 CBX8Q9HC52 389 aa17.52■□□□□ 0.4
UBXN11-204ENST00000374217 IL1RAPL2Q9NP60 686 aa17.52■□□□□ 0.4
UBXN11-204ENST00000374217 EYA2O00167 538 aa17.51■□□□□ 0.39
UBXN11-204ENST00000374217 TUBB4AP04350 444 aa17.51■□□□□ 0.39
UBXN11-204ENST00000374217 DRC7Q8IY82 874 aa17.51■□□□□ 0.39
UBXN11-204ENST00000374217 RASEFQ8IZ41 740 aa17.51■□□□□ 0.39
UBXN11-204ENST00000374217 MRFAP1L1Q96HT8 127 aa17.51■□□□□ 0.39
UBXN11-204ENST00000374217 TRIM5Q9C035 493 aa17.51■□□□□ 0.39
UBXN11-204ENST00000374217 IL15P40933 162 aaPredicted RBP17.51■□□□□ 0.39
UBXN11-204ENST00000374217 TERF2Q15554 542 aa17.51■□□□□ 0.39
UBXN11-204ENST00000374217 TPD52L1Q16890 204 aaPredicted RBP17.51■□□□□ 0.39
UBXN11-204ENST00000374217 CEP135Q66GS9 1140 aa17.51■□□□□ 0.39
UBXN11-204ENST00000374217 LDHAL6AQ6ZMR3 332 aa17.51■□□□□ 0.39
UBXN11-204ENST00000374217 TTC6Q86TZ1 520 aa17.51■□□□□ 0.39
UBXN11-204ENST00000374217 CCDC83Q8IWF9 413 aa17.51■□□□□ 0.39
UBXN11-204ENST00000374217 CLASRPQ8N2M8 674 aaKnown RBP17.51■□□□□ 0.39
UBXN11-204ENST00000374217 ERO1AQ96HE7 468 aa17.51■□□□□ 0.39
UBXN11-204ENST00000374217 C16orf45Q96MC5 204 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms