RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 CLMNQ96JQ2 1002 aa19.01■□□□□ 0.63
CDKN1A-202ENST00000373711 STK31Q9BXU1 1019 aa19.01■□□□□ 0.63
CDKN1A-202ENST00000373711 PI4KAP2A4QPH2 592 aa19■□□□□ 0.63
CDKN1A-202ENST00000373711 IGKV5-2P06315 115 aa19■□□□□ 0.63
CDKN1A-202ENST00000373711 FXR1P51114 621 aaKnown RBP eCLIP19■□□□□ 0.63
CDKN1A-202ENST00000373711 TNFAIP1Q13829 316 aa19■□□□□ 0.63
CDKN1A-202ENST00000373711 PI4KAP1Q8N8J0 262 aa19■□□□□ 0.63
CDKN1A-202ENST00000373711 CD209Q9NNX6 404 aa19■□□□□ 0.63
CDKN1A-202ENST00000373711 FZD1Q9UP38 647 aa19■□□□□ 0.63
CDKN1A-202ENST00000373711 ADAMTS8Q9UP79 889 aa19■□□□□ 0.63
CDKN1A-202ENST00000373711 A0A1B0GUL6 1792 aa19■□□□□ 0.63
CDKN1A-202ENST00000373711 CACNA1FO60840 1977 aa18.99■□□□□ 0.63
CDKN1A-202ENST00000373711 WDHD1O75717 1129 aaPredicted RBP18.99■□□□□ 0.63
CDKN1A-202ENST00000373711 EN2P19622 333 aaPredicted RBP18.99■□□□□ 0.63
CDKN1A-202ENST00000373711 ITGA6P23229 1130 aa18.99■□□□□ 0.63
CDKN1A-202ENST00000373711 FKBP1AP62942 108 aaKnown RBP18.99■□□□□ 0.63
CDKN1A-202ENST00000373711 SLC9C1Q4G0N8 1177 aa18.99■□□□□ 0.63
CDKN1A-202ENST00000373711 UBE3BQ7Z3V4 1068 aa18.99■□□□□ 0.63
CDKN1A-202ENST00000373711 VEZTQ9HBM0 779 aa18.99■□□□□ 0.63
CDKN1A-202ENST00000373711 TESPA1A2RU30 521 aaPredicted RBP18.98■□□□□ 0.63
CDKN1A-202ENST00000373711 NEURL1BA8MQ27 555 aa18.98■□□□□ 0.63
CDKN1A-202ENST00000373711 DDX10Q13206 875 aaKnown RBP18.98■□□□□ 0.63
CDKN1A-202ENST00000373711 CFAP100Q494V2 611 aa18.98■□□□□ 0.63
CDKN1A-202ENST00000373711 ZNF804AQ7Z570 1209 aa18.98■□□□□ 0.63
CDKN1A-202ENST00000373711 PLA2G12BQ9BX93 195 aa18.98■□□□□ 0.63
CDKN1A-202ENST00000373711 BRCA2P51587 3418 aa18.97■□□□□ 0.63
CDKN1A-202ENST00000373711 SPDYE2BA6NHP3 402 aa18.97■□□□□ 0.63
CDKN1A-202ENST00000373711 SPDYE6P0CI01 402 aa18.97■□□□□ 0.63
CDKN1A-202ENST00000373711 KLRK1P26718 216 aa18.97■□□□□ 0.63
CDKN1A-202ENST00000373711 CHRNDQ07001 517 aa18.97■□□□□ 0.63
CDKN1A-202ENST00000373711 ZNF333Q96JL9 665 aa18.97■□□□□ 0.63
CDKN1A-202ENST00000373711 MYH16Q9H6N6 1097 aa18.97■□□□□ 0.63
CDKN1A-202ENST00000373711 CLRN2A0PK11 232 aa18.96■□□□□ 0.63
CDKN1A-202ENST00000373711 H7C1W4 665 aa18.96■□□□□ 0.63
CDKN1A-202ENST00000373711 CWF19L2Q2TBE0 894 aaKnown RBP18.96■□□□□ 0.63
CDKN1A-202ENST00000373711 SLC4A8Q2Y0W8 1093 aa18.96■□□□□ 0.63
CDKN1A-202ENST00000373711 C15orf52Q6ZUT6 534 aaKnown RBP18.96■□□□□ 0.63
CDKN1A-202ENST00000373711 C8orf58Q8NAV2 365 aa18.96■□□□□ 0.63
CDKN1A-202ENST00000373711 ZFYVE28Q9HCC9 887 aa18.96■□□□□ 0.63
CDKN1A-202ENST00000373711 CEP290O15078 2479 aa18.95■□□□□ 0.62
CDKN1A-202ENST00000373711 ANKRD18BA2A2Z9 1011 aa18.95■□□□□ 0.62
CDKN1A-202ENST00000373711 F8W031 263 aaPredicted RBP18.95■□□□□ 0.62
CDKN1A-202ENST00000373711 RBM5P52756 815 aaKnown RBP eCLIP18.95■□□□□ 0.62
CDKN1A-202ENST00000373711 TAF1CQ15572 869 aaPredicted RBP18.95■□□□□ 0.62
CDKN1A-202ENST00000373711 NBPF12Q5TAG4 269 aaPredicted RBP18.95■□□□□ 0.62
CDKN1A-202ENST00000373711 OPTNQ96CV9 577 aa18.95■□□□□ 0.62
CDKN1A-202ENST00000373711 ARAP2Q8WZ64 1704 aa18.94■□□□□ 0.62
CDKN1A-202ENST00000373711 USP2O75604 605 aaPredicted RBP18.94■□□□□ 0.62
CDKN1A-202ENST00000373711 IL1R1P14778 569 aa18.94■□□□□ 0.62
CDKN1A-202ENST00000373711 KIF22Q14807 665 aa18.94■□□□□ 0.62
CDKN1A-202ENST00000373711 CERS5Q8N5B7 392 aa18.94■□□□□ 0.62
CDKN1A-202ENST00000373711 GJA5P36382 358 aa18.93■□□□□ 0.62
CDKN1A-202ENST00000373711 GTF2A2P52657 109 aa18.93■□□□□ 0.62
CDKN1A-202ENST00000373711 RASA3Q14644 834 aa18.93■□□□□ 0.62
CDKN1A-202ENST00000373711 PTPN18Q99952 460 aa18.93■□□□□ 0.62
CDKN1A-202ENST00000373711 ELP3Q9H9T3 547 aa18.93■□□□□ 0.62
CDKN1A-202ENST00000373711 COLQQ9Y215 455 aaPredicted RBP18.93■□□□□ 0.62
CDKN1A-202ENST00000373711 APAF1O14727 1248 aa18.92■□□□□ 0.62
CDKN1A-202ENST00000373711 CSF1RP07333 972 aa18.92■□□□□ 0.62
CDKN1A-202ENST00000373711 GCKRQ14397 625 aa18.92■□□□□ 0.62
CDKN1A-202ENST00000373711 PRMT6Q96LA8 375 aaPredicted RBP18.92■□□□□ 0.62
CDKN1A-202ENST00000373711 CSADQ9Y600 493 aa18.92■□□□□ 0.62
CDKN1A-202ENST00000373711 PTCH2Q9Y6C5 1203 aa18.92■□□□□ 0.62
CDKN1A-202ENST00000373711 TRIOBPQ9H2D6 2365 aa18.91■□□□□ 0.62
CDKN1A-202ENST00000373711 TNNI2P48788 182 aa18.91■□□□□ 0.62
CDKN1A-202ENST00000373711 CCL15-CCL14A0A0B4J2E2 113 aa18.9■□□□□ 0.62
CDKN1A-202ENST00000373711 GNRH1P01148 92 aa18.9■□□□□ 0.62
CDKN1A-202ENST00000373711 PRMT2P55345 433 aa18.9■□□□□ 0.62
CDKN1A-202ENST00000373711 IFIT5Q13325 482 aaKnown RBP18.9■□□□□ 0.62
CDKN1A-202ENST00000373711 CCL15Q16663 113 aa18.9■□□□□ 0.62
CDKN1A-202ENST00000373711 MS4A4AQ96JQ5 239 aa18.9■□□□□ 0.62
CDKN1A-202ENST00000373711 ZCCHC17Q9NP64 241 aaKnown RBP18.9■□□□□ 0.62
CDKN1A-202ENST00000373711 PCDHAC2Q9Y5I4 1007 aa18.9■□□□□ 0.62
CDKN1A-202ENST00000373711 SPDYE2Q495Y8 402 aa18.89■□□□□ 0.61
CDKN1A-202ENST00000373711 SERPINA10Q9UK55 444 aa18.89■□□□□ 0.61
CDKN1A-202ENST00000373711 IRS2Q9Y4H2 1338 aa18.89■□□□□ 0.61
CDKN1A-202ENST00000373711 TAF5LO75529 589 aa18.88■□□□□ 0.61
CDKN1A-202ENST00000373711 TSPYL6Q8N831 410 aa18.88■□□□□ 0.61
CDKN1A-202ENST00000373711 LINS1Q8NG48 757 aa18.88■□□□□ 0.61
CDKN1A-202ENST00000373711 BRI3BPQ8WY22 251 aa18.88■□□□□ 0.61
CDKN1A-202ENST00000373711 ZNF70Q9UC06 446 aaPredicted RBP18.88■□□□□ 0.61
CDKN1A-202ENST00000373711 CHMP3Q9Y3E7 222 aa18.88■□□□□ 0.61
CDKN1A-202ENST00000373711 SLC4A2P04920 1241 aa18.87■□□□□ 0.61
CDKN1A-202ENST00000373711 CASP7P55210 303 aa18.87■□□□□ 0.61
CDKN1A-202ENST00000373711 MAP3K9P80192 1104 aa18.87■□□□□ 0.61
CDKN1A-202ENST00000373711 TWISTNBQ3B726 338 aaPredicted RBP18.87■□□□□ 0.61
CDKN1A-202ENST00000373711 TAF7LQ5H9L4 462 aa18.87■□□□□ 0.61
CDKN1A-202ENST00000373711 DNAAF4Q8WXU2 420 aa18.87■□□□□ 0.61
CDKN1A-202ENST00000373711 FAM205AQ6ZU69 1335 aa18.86■□□□□ 0.61
CDKN1A-202ENST00000373711 H0YGN5 161 aa18.86■□□□□ 0.61
CDKN1A-202ENST00000373711 CETPP11597 493 aa18.86■□□□□ 0.61
CDKN1A-202ENST00000373711 FLIIQ13045 1269 aa18.86■□□□□ 0.61
CDKN1A-202ENST00000373711 FKBP5Q13451 457 aaPredicted RBP18.86■□□□□ 0.61
CDKN1A-202ENST00000373711 VGLL4Q14135 290 aa18.86■□□□□ 0.61
CDKN1A-202ENST00000373711 MFSD14BQ5SR56 506 aa18.86■□□□□ 0.61
CDKN1A-202ENST00000373711 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.86■□□□□ 0.61
CDKN1A-202ENST00000373711 HELBQ8NG08 1087 aaPredicted RBP18.86■□□□□ 0.61
CDKN1A-202ENST00000373711 NKX2-3Q8TAU0 364 aa18.86■□□□□ 0.61
CDKN1A-202ENST00000373711 HOOK2Q96ED9 719 aa18.86■□□□□ 0.61
CDKN1A-202ENST00000373711 OTUD5Q96G74 571 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms