RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 TRPM4Q8TD43 1214 aa22.64■■□□□ 1.21
PBX3-205ENST00000373492 USP17L8P0C7I0 530 aa22.63■■□□□ 1.21
PBX3-205ENST00000373492 HIBADHP31937 336 aaKnown RBP22.63■■□□□ 1.21
PBX3-205ENST00000373492 SAMD7Q7Z3H4 446 aa22.63■■□□□ 1.21
PBX3-205ENST00000373492 VPS37DQ86XT2 251 aa22.63■■□□□ 1.21
PBX3-205ENST00000373492 FBXW7Q969H0 707 aa22.63■■□□□ 1.21
PBX3-205ENST00000373492 EXOC6BQ9Y2D4 811 aa22.63■■□□□ 1.21
PBX3-205ENST00000373492 SASH1O94885 1247 aa22.62■■□□□ 1.21
PBX3-205ENST00000373492 GTF2IP78347 998 aa22.62■■□□□ 1.21
PBX3-205ENST00000373492 IRX6P78412 446 aaPredicted RBP22.62■■□□□ 1.21
PBX3-205ENST00000373492 TBC1D10BQ4KMP7 808 aaPredicted RBP22.62■■□□□ 1.21
PBX3-205ENST00000373492 FAM84BQ96KN1 310 aaPredicted RBP22.62■■□□□ 1.21
PBX3-205ENST00000373492 CEP350Q5VT06 3117 aa22.61■■□□□ 1.21
PBX3-205ENST00000373492 GYG1P46976 350 aa22.61■■□□□ 1.21
PBX3-205ENST00000373492 PCDHB15Q9Y5E8 787 aa22.61■■□□□ 1.21
PBX3-205ENST00000373492 FKBP1AP62942 108 aaKnown RBP22.6■■□□□ 1.21
PBX3-205ENST00000373492 KIF4BQ2VIQ3 1234 aa22.6■■□□□ 1.21
PBX3-205ENST00000373492 FBXO33Q7Z6M2 555 aa22.6■■□□□ 1.21
PBX3-205ENST00000373492 OGFOD1Q8N543 542 aa22.6■■□□□ 1.21
PBX3-205ENST00000373492 TDRD7Q8NHU6 1098 aaKnown RBP22.6■■□□□ 1.21
PBX3-205ENST00000373492 MXD3Q9BW11 206 aa22.6■■□□□ 1.21
PBX3-205ENST00000373492 A0A1B0GUL7 405 aa22.59■■□□□ 1.21
PBX3-205ENST00000373492 RAB11FIP3O75154 756 aa22.59■■□□□ 1.21
PBX3-205ENST00000373492 EGFRP00533 1210 aa22.59■■□□□ 1.21
PBX3-205ENST00000373492 RBM26Q5T8P6 1007 aaKnown RBP22.59■■□□□ 1.21
PBX3-205ENST00000373492 NEUROD6Q96NK8 337 aa22.59■■□□□ 1.21
PBX3-205ENST00000373492 GPR108Q9NPR9 543 aa22.59■■□□□ 1.21
PBX3-205ENST00000373492 CREBZFQ9NS37 354 aa22.59■■□□□ 1.21
PBX3-205ENST00000373492 TIMM10P62072 90 aa22.58■■□□□ 1.21
PBX3-205ENST00000373492 KIF1BPQ96EK5 621 aa22.58■■□□□ 1.21
PBX3-205ENST00000373492 MYOZ2Q9NPC6 264 aa22.58■■□□□ 1.21
PBX3-205ENST00000373492 FAM205AQ6ZU69 1335 aa22.57■■□□□ 1.2
PBX3-205ENST00000373492 APBB1O00213 710 aa22.57■■□□□ 1.2
PBX3-205ENST00000373492 FRAT2O75474 233 aaPredicted RBP22.57■■□□□ 1.2
PBX3-205ENST00000373492 HTRA3P83110 453 aa22.57■■□□□ 1.2
PBX3-205ENST00000373492 CDC37L1Q7L3B6 337 aa22.57■■□□□ 1.2
PBX3-205ENST00000373492 DNAJC5GQ8N7S2 189 aa22.57■■□□□ 1.2
PBX3-205ENST00000373492 HDAC9Q9UKV0 1011 aa22.57■■□□□ 1.2
PBX3-205ENST00000373492 TMEM88BA6NKF7 163 aa22.56■■□□□ 1.2
PBX3-205ENST00000373492 BCAMP50895 628 aa22.56■■□□□ 1.2
PBX3-205ENST00000373492 TNNI3KQ59H18 835 aa22.56■■□□□ 1.2
PBX3-205ENST00000373492 GORABQ5T7V8 394 aa22.56■■□□□ 1.2
PBX3-205ENST00000373492 RHPN1Q8TCX5 695 aa22.56■■□□□ 1.2
PBX3-205ENST00000373492 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.56■■□□□ 1.2
PBX3-205ENST00000373492 FPGT-TNNI3KV9GXZ4 949 aa22.56■■□□□ 1.2
PBX3-205ENST00000373492 AKAP11Q9UKA4 1901 aa22.56■■□□□ 1.2
PBX3-205ENST00000373492 KIAA0825Q8IV33 1275 aa22.55■■□□□ 1.2
PBX3-205ENST00000373492 DCPSQ96C86 337 aaKnown RBP22.55■■□□□ 1.2
PBX3-205ENST00000373492 XAGE2Q96GT9 111 aa22.55■■□□□ 1.2
PBX3-205ENST00000373492 GNL3LQ9NVN8 582 aaKnown RBP22.55■■□□□ 1.2
PBX3-205ENST00000373492 ECM29Q5VYK3 1845 aa22.54■■□□□ 1.2
PBX3-205ENST00000373492 SCARF1Q14162 830 aa22.54■■□□□ 1.2
PBX3-205ENST00000373492 CLASRPQ8N2M8 674 aaKnown RBP22.54■■□□□ 1.2
PBX3-205ENST00000373492 CERS5Q8N5B7 392 aa22.54■■□□□ 1.2
PBX3-205ENST00000373492 GLIS2Q9BZE0 524 aaPredicted RBP22.54■■□□□ 1.2
PBX3-205ENST00000373492 DCTPP1Q9H773 170 aa22.54■■□□□ 1.2
PBX3-205ENST00000373492 POLR2AP24928 1970 aaKnown RBP22.54■■□□□ 1.2
PBX3-205ENST00000373492 ADORA1P30542 326 aa22.53■■□□□ 1.2
PBX3-205ENST00000373492 HDAC1Q13547 482 aaPredicted RBP22.53■■□□□ 1.2
PBX3-205ENST00000373492 LRRCC1Q9C099 1032 aa22.53■■□□□ 1.2
PBX3-205ENST00000373492 RWDD1Q9H446 243 aaPredicted RBP22.53■■□□□ 1.2
PBX3-205ENST00000373492 IQSEC3Q9UPP2 1182 aaPredicted RBP22.53■■□□□ 1.2
PBX3-205ENST00000373492 MYO5AQ9Y4I1 1855 aaKnown RBP22.52■■□□□ 1.2
PBX3-205ENST00000373492 TRAF5O00463 557 aa22.52■■□□□ 1.2
PBX3-205ENST00000373492 CCDC102BQ68D86 513 aa22.52■■□□□ 1.2
PBX3-205ENST00000373492 KRT26Q7Z3Y9 468 aa22.52■■□□□ 1.2
PBX3-205ENST00000373492 KLRG1Q96E93 195 aa22.52■■□□□ 1.2
PBX3-205ENST00000373492 IL1RAPL2Q9NP60 686 aa22.52■■□□□ 1.2
PBX3-205ENST00000373492 NEFLP07196 543 aa22.51■■□□□ 1.19
PBX3-205ENST00000373492 PHKA1P46020 1223 aa22.51■■□□□ 1.19
PBX3-205ENST00000373492 MFSD14BQ5SR56 506 aa22.51■■□□□ 1.19
PBX3-205ENST00000373492 USP48Q86UV5 1035 aa22.51■■□□□ 1.19
PBX3-205ENST00000373492 TBC1D22AQ8WUA7 517 aa22.51■■□□□ 1.19
PBX3-205ENST00000373492 GGA3Q9NZ52 723 aa22.51■■□□□ 1.19
PBX3-205ENST00000373492 JAG2Q9Y219 1238 aa22.51■■□□□ 1.19
PBX3-205ENST00000373492 PITPNM2Q9BZ72 1349 aa22.51■■□□□ 1.19
PBX3-205ENST00000373492 SEMA3EO15041 775 aa22.5■■□□□ 1.19
PBX3-205ENST00000373492 CCDC158Q5M9N0 1113 aa22.5■■□□□ 1.19
PBX3-205ENST00000373492 AACSQ86V21 672 aa22.5■■□□□ 1.19
PBX3-205ENST00000373492 SULF1Q8IWU6 871 aa22.5■■□□□ 1.19
PBX3-205ENST00000373492 MTMR14Q8NCE2 650 aa22.5■■□□□ 1.19
PBX3-205ENST00000373492 EAF2Q96CJ1 260 aaPredicted RBP22.5■■□□□ 1.19
PBX3-205ENST00000373492 GCC1Q96CN9 775 aa22.5■■□□□ 1.19
PBX3-205ENST00000373492 MYH2Q9UKX2 1941 aa22.5■■□□□ 1.19
PBX3-205ENST00000373492 WNT10BO00744 389 aa22.49■■□□□ 1.19
PBX3-205ENST00000373492 ZBTB22O15209 634 aa22.49■■□□□ 1.19
PBX3-205ENST00000373492 FMR1Q06787 632 aaKnown RBP eCLIP22.49■■□□□ 1.19
PBX3-205ENST00000373492 CHAF1AQ13111 956 aaPredicted RBP22.49■■□□□ 1.19
PBX3-205ENST00000373492 NBPF9Q3BBW0 867 aa22.49■■□□□ 1.19
PBX3-205ENST00000373492 ANGEL2Q5VTE6 544 aaKnown RBP22.49■■□□□ 1.19
PBX3-205ENST00000373492 CST9Q5W186 159 aa22.49■■□□□ 1.19
PBX3-205ENST00000373492 ZBED3Q96IU2 234 aaPredicted RBP22.49■■□□□ 1.19
PBX3-205ENST00000373492 DBNDD2Q9BQY9 259 aa22.49■■□□□ 1.19
PBX3-205ENST00000373492 CCDC8Q9H0W5 538 aaPredicted RBP22.49■■□□□ 1.19
PBX3-205ENST00000373492 BCL11AQ9H165 835 aa22.49■■□□□ 1.19
PBX3-205ENST00000373492 ZBTB47Q9UFB7 747 aaPredicted RBP22.49■■□□□ 1.19
PBX3-205ENST00000373492 DENND2AQ9ULE3 1009 aa22.49■■□□□ 1.19
PBX3-205ENST00000373492 ASTN2O75129 1339 aaPredicted RBP22.49■■□□□ 1.19
PBX3-205ENST00000373492 F8W031 263 aaPredicted RBP22.48■■□□□ 1.19
PBX3-205ENST00000373492 IFIT2P09913 472 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms