RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 METAP2P50579 478 aaKnown RBP eCLIP15.43■□□□□ 0.06
NCDN-203ENST00000373253 CCDC87Q9NVE4 849 aa15.43■□□□□ 0.06
NCDN-203ENST00000373253 GOLGA8AA7E2F4 631 aa15.43■□□□□ 0.06
NCDN-203ENST00000373253 PDE8AO60658 829 aa15.43■□□□□ 0.06
NCDN-203ENST00000373253 CYP2E1P05181 493 aaPredicted RBP15.43■□□□□ 0.06
NCDN-203ENST00000373253 MCAMP43121 646 aa15.43■□□□□ 0.06
NCDN-203ENST00000373253 NACAP1Q9BZK3 213 aa15.43■□□□□ 0.06
NCDN-203ENST00000373253 CCDC39Q9UFE4 941 aa15.43■□□□□ 0.06
NCDN-203ENST00000373253 KDM4FA0A1W2PPD8 638 aa15.42■□□□□ 0.06
NCDN-203ENST00000373253 WTIPA6NIX2 430 aaPredicted RBP15.42■□□□□ 0.06
NCDN-203ENST00000373253 CCDC152Q4G0S7 254 aa15.42■□□□□ 0.06
NCDN-203ENST00000373253 ZSCAN25Q6NSZ9 544 aa15.42■□□□□ 0.06
NCDN-203ENST00000373253 RRP9O43818 475 aaKnown RBP15.42■□□□□ 0.06
NCDN-203ENST00000373253 PCCAP05165 728 aaPredicted RBP15.42■□□□□ 0.06
NCDN-203ENST00000373253 SRP68Q9UHB9 627 aaKnown RBP15.42■□□□□ 0.06
NCDN-203ENST00000373253 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
NCDN-203ENST00000373253 PES1O00541 588 aaKnown RBP15.41■□□□□ 0.06
NCDN-203ENST00000373253 NR1I2O75469 434 aa15.41■□□□□ 0.06
NCDN-203ENST00000373253 HMGB1P09429 215 aaKnown RBP15.41■□□□□ 0.06
NCDN-203ENST00000373253 ZNF165P49910 485 aa15.41■□□□□ 0.06
NCDN-203ENST00000373253 SMC2O95347 1197 aa15.41■□□□□ 0.06
NCDN-203ENST00000373253 ZNF445P59923 1031 aa15.41■□□□□ 0.06
NCDN-203ENST00000373253 ANKRD18AQ8IVF6 992 aa15.41■□□□□ 0.06
NCDN-203ENST00000373253 APPBP2Q92624 585 aa15.41■□□□□ 0.06
NCDN-203ENST00000373253 GTF3C6Q969F1 213 aa15.41■□□□□ 0.06
NCDN-203ENST00000373253 ZNF396Q96N95 335 aaPredicted RBP15.41■□□□□ 0.06
NCDN-203ENST00000373253 SART3Q15020 963 aaKnown RBP15.41■□□□□ 0.06
NCDN-203ENST00000373253 LEO1Q8WVC0 666 aaPredicted RBP15.41■□□□□ 0.06
NCDN-203ENST00000373253 TM6SF1Q9BZW5 370 aa15.41■□□□□ 0.06
NCDN-203ENST00000373253 PIH1D3Q9NQM4 214 aaKnown RBP15.41■□□□□ 0.06
NCDN-203ENST00000373253 ATP2B2Q01814 1243 aa15.4■□□□□ 0.06
NCDN-203ENST00000373253 SAFBQ15424 915 aaKnown RBP eCLIP15.4■□□□□ 0.06
NCDN-203ENST00000373253 CAVIN4Q5BKX8 364 aa15.4■□□□□ 0.06
NCDN-203ENST00000373253 MFSD6Q6ZSS7 791 aa15.4■□□□□ 0.06
NCDN-203ENST00000373253 HELLSQ9NRZ9 838 aa15.4■□□□□ 0.06
NCDN-203ENST00000373253 GNL3LQ9NVN8 582 aaKnown RBP15.4■□□□□ 0.06
NCDN-203ENST00000373253 NCAPD2Q15021 1401 aa15.4■□□□□ 0.06
NCDN-203ENST00000373253 F8W031 263 aaPredicted RBP15.4■□□□□ 0.06
NCDN-203ENST00000373253 PDE8BO95263 885 aa15.4■□□□□ 0.06
NCDN-203ENST00000373253 ALG1Q9BT22 464 aa15.4■□□□□ 0.06
NCDN-203ENST00000373253 ZNF652Q9Y2D9 606 aa15.4■□□□□ 0.06
NCDN-203ENST00000373253 CYP2D7A0A087X1C5 515 aa15.4■□□□□ 0.06
NCDN-203ENST00000373253 ZMYM1Q5SVZ6 1142 aa15.4■□□□□ 0.06
NCDN-203ENST00000373253 USP28Q96RU2 1077 aa15.4■□□□□ 0.06
NCDN-203ENST00000373253 ZNF609O15014 1411 aa15.39■□□□□ 0.05
NCDN-203ENST00000373253 CYP19A1P11511 503 aaPredicted RBP15.39■□□□□ 0.05
NCDN-203ENST00000373253 GPR101Q96P66 508 aaPredicted RBP15.39■□□□□ 0.05
NCDN-203ENST00000373253 SETDB2Q96T68 719 aa15.39■□□□□ 0.05
NCDN-203ENST00000373253 PDE6AP16499 860 aa15.39■□□□□ 0.05
NCDN-203ENST00000373253 IARSP41252 1262 aaKnown RBP15.39■□□□□ 0.05
NCDN-203ENST00000373253 GOLGA6L6A8MZA4 724 aa15.39■□□□□ 0.05
NCDN-203ENST00000373253 TYRO3Q06418 890 aa15.39■□□□□ 0.05
NCDN-203ENST00000373253 RABL6Q3YEC7 729 aaPredicted RBP15.39■□□□□ 0.05
NCDN-203ENST00000373253 SPATA5Q8NB90 893 aa15.39■□□□□ 0.05
NCDN-203ENST00000373253 RGPD2P0DJD1 1756 aa15.38■□□□□ 0.05
NCDN-203ENST00000373253 BAZ2BQ9UIF8 2168 aaKnown RBP15.38■□□□□ 0.05
NCDN-203ENST00000373253 HMGN5P82970 282 aaKnown RBP15.38■□□□□ 0.05
NCDN-203ENST00000373253 SLC4A9Q96Q91 983 aa15.38■□□□□ 0.05
NCDN-203ENST00000373253 GOLGB1Q14789 3259 aaKnown RBP15.38■□□□□ 0.05
NCDN-203ENST00000373253 ZBTB43O43298 467 aa15.38■□□□□ 0.05
NCDN-203ENST00000373253 RFC4P35249 363 aa15.38■□□□□ 0.05
NCDN-203ENST00000373253 PUM3Q15397 648 aaKnown RBP15.38■□□□□ 0.05
NCDN-203ENST00000373253 USPL1Q5W0Q7 1092 aa15.38■□□□□ 0.05
NCDN-203ENST00000373253 CDC5LQ99459 802 aaKnown RBP15.38■□□□□ 0.05
NCDN-203ENST00000373253 PDIA3P30101 505 aaKnown RBP15.37■□□□□ 0.05
NCDN-203ENST00000373253 PTPN21Q16825 1174 aa15.37■□□□□ 0.05
NCDN-203ENST00000373253 PTF1AQ7RTS3 328 aa15.37■□□□□ 0.05
NCDN-203ENST00000373253 KCNJ14Q9UNX9 436 aa15.37■□□□□ 0.05
NCDN-203ENST00000373253 TOM1O60784 492 aa15.37■□□□□ 0.05
NCDN-203ENST00000373253 ZFYP08048 801 aaPredicted RBP15.37■□□□□ 0.05
NCDN-203ENST00000373253 TSC1Q92574 1164 aa15.37■□□□□ 0.05
NCDN-203ENST00000373253 ISCA1Q9BUE6 129 aa15.37■□□□□ 0.05
NCDN-203ENST00000373253 NCOA3Q9Y6Q9 1424 aa15.37■□□□□ 0.05
NCDN-203ENST00000373253 LTN1O94822 1766 aa15.37■□□□□ 0.05
NCDN-203ENST00000373253 ERFEQ4G0M1 354 aa15.37■□□□□ 0.05
NCDN-203ENST00000373253 TRIM22Q8IYM9 498 aa15.37■□□□□ 0.05
NCDN-203ENST00000373253 NALCNQ8IZF0 1738 aa15.36■□□□□ 0.05
NCDN-203ENST00000373253 LETM1O95202 739 aaPredicted RBP15.36■□□□□ 0.05
NCDN-203ENST00000373253 ST3GAL1Q11201 340 aa15.36■□□□□ 0.05
NCDN-203ENST00000373253 RASGRF1Q13972 1273 aa15.36■□□□□ 0.05
NCDN-203ENST00000373253 TTF1Q15361 905 aaPredicted RBP15.36■□□□□ 0.05
NCDN-203ENST00000373253 NLRP3Q96P20 1036 aa15.36■□□□□ 0.05
NCDN-203ENST00000373253 RPAP1Q9BWH6 1393 aaPredicted RBP15.36■□□□□ 0.05
NCDN-203ENST00000373253 SOS2Q07890 1332 aaPredicted RBP15.36■□□□□ 0.05
NCDN-203ENST00000373253 CHRNDQ07001 517 aa15.36■□□□□ 0.05
NCDN-203ENST00000373253 DZIP1Q86YF9 867 aaKnown RBP15.36■□□□□ 0.05
NCDN-203ENST00000373253 TRMT1Q9NXH9 659 aaKnown RBP15.36■□□□□ 0.05
NCDN-203ENST00000373253 AATFQ9NY61 560 aaKnown RBP eCLIP15.36■□□□□ 0.05
NCDN-203ENST00000373253 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.36■□□□□ 0.05
NCDN-203ENST00000373253 CDK11BP21127 795 aaKnown RBP15.36■□□□□ 0.05
NCDN-203ENST00000373253 CLCN1P35523 988 aa15.36■□□□□ 0.05
NCDN-203ENST00000373253 KLHL10Q6JEL2 608 aa15.36■□□□□ 0.05
NCDN-203ENST00000373253 FAM177A1Q8N128 213 aaPredicted RBP15.36■□□□□ 0.05
NCDN-203ENST00000373253 LPIN2Q92539 896 aa15.36■□□□□ 0.05
NCDN-203ENST00000373253 CCNL1Q9UK58 526 aaPredicted RBP15.36■□□□□ 0.05
NCDN-203ENST00000373253 NWD1Q149M9 1564 aa15.35■□□□□ 0.05
NCDN-203ENST00000373253 UBE2Q2LH0YL09 131 aa15.35■□□□□ 0.05
NCDN-203ENST00000373253 C6orf229H3BNL8 230 aa15.35■□□□□ 0.05
NCDN-203ENST00000373253 NFAT5O94916 1531 aa15.35■□□□□ 0.05
NCDN-203ENST00000373253 UQCRFS1P1P0C7P4 283 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms