RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 TRIM47Q96LD4 638 aa11.98□□□□□ -0.49
NUP188-201ENST00000372577 EYA3Q99504 573 aa11.98□□□□□ -0.49
NUP188-201ENST00000372577 FEZ1Q99689 392 aa11.98□□□□□ -0.49
NUP188-201ENST00000372577 UBA5Q9GZZ9 404 aa11.98□□□□□ -0.49
NUP188-201ENST00000372577 UBAP1LF5GYI3 381 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 PSMA7O14818 248 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 IFI16Q16666 785 aaKnown RBP11.97□□□□□ -0.49
NUP188-201ENST00000372577 CCDC102AQ96A19 550 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 C16orf45Q96MC5 204 aaPredicted RBP11.97□□□□□ -0.49
NUP188-201ENST00000372577 VAT1LQ9HCJ6 419 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 ZKSCAN5Q9Y2L8 839 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 CDK12Q9NYV4 1490 aaPredicted RBP11.97□□□□□ -0.49
NUP188-201ENST00000372577 MAP3K4Q9Y6R4 1608 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 ITGA6P23229 1130 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 GNA11P29992 359 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 TDRD12Q587J7 1177 aaKnown RBP11.97□□□□□ -0.49
NUP188-201ENST00000372577 SEPT7Q16181 437 aaKnown RBP11.97□□□□□ -0.49
NUP188-201ENST00000372577 RRAGBQ5VZM2 374 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 CEP135Q66GS9 1140 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 MROH5Q6ZUA9 1318 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 LDHBP07195 334 aaKnown RBP11.97□□□□□ -0.49
NUP188-201ENST00000372577 ATP5JP18859 108 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 HSPA4P34932 840 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 ZNF622Q969S3 477 aaKnown RBP eCLIP11.97□□□□□ -0.494e-7■□□□□ 8.7
NUP188-201ENST00000372577 RRP36Q96EU6 259 aaKnown RBP11.97□□□□□ -0.49
NUP188-201ENST00000372577 PNMA6EA0A0J9YXQ4 647 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 PPP1R2P41236 205 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 ZRSR2Q15696 482 aaKnown RBP11.97□□□□□ -0.49
NUP188-201ENST00000372577 UGGT1Q9NYU2 1555 aa11.97□□□□□ -0.49
NUP188-201ENST00000372577 TBCAO75347 108 aaKnown RBP11.96□□□□□ -0.49
NUP188-201ENST00000372577 WDHD1O75717 1129 aaPredicted RBP11.96□□□□□ -0.49
NUP188-201ENST00000372577 NAPAP54920 295 aa11.96□□□□□ -0.49
NUP188-201ENST00000372577 MPHOSPH6Q99547 160 aaKnown RBP11.96□□□□□ -0.49
NUP188-201ENST00000372577 TSPYL1Q9H0U9 437 aa11.96□□□□□ -0.49
NUP188-201ENST00000372577 TRPM1Q7Z4N2 1603 aa11.96□□□□□ -0.49
NUP188-201ENST00000372577 CYLC1P35663 651 aaPredicted RBP11.96□□□□□ -0.49
NUP188-201ENST00000372577 TUBB4BP68371 445 aa11.96□□□□□ -0.49
NUP188-201ENST00000372577 OTUD7AQ8TE49 926 aaPredicted RBP11.96□□□□□ -0.49
NUP188-201ENST00000372577 FBXO3Q9UK99 471 aa11.96□□□□□ -0.49
NUP188-201ENST00000372577 USP6P35125 1406 aa11.96□□□□□ -0.49
NUP188-201ENST00000372577 GOLGA6L7A0A1B0GV03 622 aa11.96□□□□□ -0.49
NUP188-201ENST00000372577 GIGYF1O75420 1035 aaPredicted RBP11.96□□□□□ -0.49
NUP188-201ENST00000372577 PRIM1P49642 420 aaKnown RBP11.96□□□□□ -0.49
NUP188-201ENST00000372577 CPLX3Q8WVH0 158 aa11.96□□□□□ -0.49
NUP188-201ENST00000372577 LPIN2Q92539 896 aa11.96□□□□□ -0.49
NUP188-201ENST00000372577 XAGE2Q96GT9 111 aa11.96□□□□□ -0.49
NUP188-201ENST00000372577 DBNDD2Q9BQY9 259 aa11.96□□□□□ -0.49
NUP188-201ENST00000372577 METP08581 1390 aa11.96□□□□□ -0.5
NUP188-201ENST00000372577 RILPL1Q5EBL4 403 aa11.96□□□□□ -0.5
NUP188-201ENST00000372577 HEATR3Q7Z4Q2 680 aa11.96□□□□□ -0.5
NUP188-201ENST00000372577 DSCC1Q9BVC3 393 aa11.96□□□□□ -0.5
NUP188-201ENST00000372577 PANK2Q9BZ23 570 aa11.96□□□□□ -0.5
NUP188-201ENST00000372577 TRMT1Q9NXH9 659 aaKnown RBP11.96□□□□□ -0.5
NUP188-201ENST00000372577 ELP1O95163 1332 aa11.96□□□□□ -0.5
NUP188-201ENST00000372577 IGSF1Q8N6C5 1336 aa11.96□□□□□ -0.5
NUP188-201ENST00000372577 SRRTQ9BXP5 876 aaKnown RBP11.95□□□□□ -0.5
NUP188-201ENST00000372577 CROCC2H7BZ55 1655 aa11.95□□□□□ -0.5
NUP188-201ENST00000372577 RBM17Q96I25 401 aaKnown RBP11.95□□□□□ -0.5
NUP188-201ENST00000372577 ZC3H12CQ9C0D7 883 aaKnown RBP11.95□□□□□ -0.5
NUP188-201ENST00000372577 BICDL2A1A5D9 508 aa11.95□□□□□ -0.5
NUP188-201ENST00000372577 NEURL1BA8MQ27 555 aa11.95□□□□□ -0.5
NUP188-201ENST00000372577 FAM160A1Q05DH4 1040 aa11.95□□□□□ -0.5
NUP188-201ENST00000372577 USP37Q86T82 979 aa11.95□□□□□ -0.5
NUP188-201ENST00000372577 DNAJC25Q9H1X3 360 aa11.95□□□□□ -0.5
NUP188-201ENST00000372577 MCM9Q9NXL9 1143 aa11.95□□□□□ -0.5
NUP188-201ENST00000372577 MBD4O95243 580 aa11.95□□□□□ -0.5
NUP188-201ENST00000372577 DEXIO95424 95 aa11.95□□□□□ -0.5
NUP188-201ENST00000372577 NOLC1Q14978 699 aaKnown RBP eCLIP11.95□□□□□ -0.5
NUP188-201ENST00000372577 LUZP1Q86V48 1076 aa11.95□□□□□ -0.5
NUP188-201ENST00000372577 AOPEPQ8N6M6 819 aa11.95□□□□□ -0.5
NUP188-201ENST00000372577 C8orf37Q96NL8 207 aa11.95□□□□□ -0.5
NUP188-201ENST00000372577 CKAP4Q07065 602 aaKnown RBP11.95□□□□□ -0.5
NUP188-201ENST00000372577 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.95□□□□□ -0.5
NUP188-201ENST00000372577 TTC6Q86TZ1 520 aa11.95□□□□□ -0.5
NUP188-201ENST00000372577 FAM89AQ96GI7 184 aa11.95□□□□□ -0.5
NUP188-201ENST00000372577 LMTK3Q96Q04 1460 aa11.94□□□□□ -0.5
NUP188-201ENST00000372577 PATL2C9JE40 543 aaKnown RBP11.94□□□□□ -0.5
NUP188-201ENST00000372577 NEFHP12036 1026 aa11.94□□□□□ -0.5
NUP188-201ENST00000372577 SKILP12757 684 aa11.94□□□□□ -0.5
NUP188-201ENST00000372577 PHKG2P15735 406 aa11.94□□□□□ -0.5
NUP188-201ENST00000372577 IL17REQ8NFR9 667 aa11.94□□□□□ -0.5
NUP188-201ENST00000372577 CCDC87Q9NVE4 849 aa11.94□□□□□ -0.5
NUP188-201ENST00000372577 IQSEC3Q9UPP2 1182 aaPredicted RBP11.94□□□□□ -0.5
NUP188-201ENST00000372577 IBTKQ9P2D0 1353 aaPredicted RBP11.94□□□□□ -0.5
NUP188-201ENST00000372577 ANGEL1Q9UNK9 670 aaKnown RBP11.94□□□□□ -0.5
NUP188-201ENST00000372577 MARCKSP29966 332 aaPredicted RBP11.94□□□□□ -0.5
NUP188-201ENST00000372577 ZNF496Q96IT1 587 aaPredicted RBP11.94□□□□□ -0.5
NUP188-201ENST00000372577 GBP2P32456 591 aaPredicted RBP11.94□□□□□ -0.5
NUP188-201ENST00000372577 TIMM10P62072 90 aa11.94□□□□□ -0.5
NUP188-201ENST00000372577 TAF3Q5VWG9 929 aa11.94□□□□□ -0.5
NUP188-201ENST00000372577 CCDC186Q7Z3E2 898 aa11.94□□□□□ -0.5
NUP188-201ENST00000372577 IQUBQ8NA54 791 aa11.94□□□□□ -0.5
NUP188-201ENST00000372577 USP44Q9H0E7 712 aa11.94□□□□□ -0.5
NUP188-201ENST00000372577 SKIDA1Q1XH10 827 aa11.93□□□□□ -0.5
NUP188-201ENST00000372577 TRAPPC3LQ5T215 181 aa11.93□□□□□ -0.5
NUP188-201ENST00000372577 OGFOD1Q8N543 542 aa11.93□□□□□ -0.5
NUP188-201ENST00000372577 AFMP43652 599 aa11.93□□□□□ -0.5
NUP188-201ENST00000372577 TAOK3Q9H2K8 898 aa11.93□□□□□ -0.5
NUP188-201ENST00000372577 HSPA2P54652 639 aa11.93□□□□□ -0.5
NUP188-201ENST00000372577 TCIRG1Q13488 830 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms