RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 XAGE2Q96GT9 111 aa22.37■■□□□ 1.17
TMEM53-202ENST00000372237 BCL2L12Q9HB09 334 aa22.37■■□□□ 1.17
TMEM53-202ENST00000372237 ZFYP08048 801 aaPredicted RBP22.37■■□□□ 1.17
TMEM53-202ENST00000372237 NKX1-1Q15270 411 aaPredicted RBP22.37■■□□□ 1.17
TMEM53-202ENST00000372237 ZNF330Q9Y3S2 320 aaPredicted RBP22.37■■□□□ 1.17
TMEM53-202ENST00000372237 ADORA1P30542 326 aa22.36■■□□□ 1.17
TMEM53-202ENST00000372237 EVCP57679 992 aa22.36■■□□□ 1.17
TMEM53-202ENST00000372237 CCDC144BQ3MJ40 725 aa22.36■■□□□ 1.17
TMEM53-202ENST00000372237 CCDC144CPQ8IYA2 1237 aa22.36■■□□□ 1.17
TMEM53-202ENST00000372237 CACTINQ8WUQ7 758 aaKnown RBP22.36■■□□□ 1.17
TMEM53-202ENST00000372237 C16orf45Q96MC5 204 aaPredicted RBP22.36■■□□□ 1.17
TMEM53-202ENST00000372237 GPHNQ9NQX3 736 aaPredicted RBP22.36■■□□□ 1.17
TMEM53-202ENST00000372237 ANO10Q9NW15 660 aa22.36■■□□□ 1.17
TMEM53-202ENST00000372237 MRFAP1L1Q96HT8 127 aa22.35■■□□□ 1.17
TMEM53-202ENST00000372237 CCDC85AQ96PX6 553 aaPredicted RBP22.35■■□□□ 1.17
TMEM53-202ENST00000372237 ISCA1Q9BUE6 129 aa22.35■■□□□ 1.17
TMEM53-202ENST00000372237 CCDC94Q9BW85 323 aaPredicted RBP22.35■■□□□ 1.17
TMEM53-202ENST00000372237 FBXO3Q9UK99 471 aa22.35■■□□□ 1.17
TMEM53-202ENST00000372237 TCIRG1Q13488 830 aa22.35■■□□□ 1.17
TMEM53-202ENST00000372237 PCDHA7Q9UN72 937 aa22.35■■□□□ 1.17
TMEM53-202ENST00000372237 NWD2Q9ULI1 1742 aa22.34■■□□□ 1.17
TMEM53-202ENST00000372237 FOXP2O15409 715 aa22.34■■□□□ 1.17
TMEM53-202ENST00000372237 FGAP02671 866 aa22.34■■□□□ 1.17
TMEM53-202ENST00000372237 TAF7LQ5H9L4 462 aa22.34■■□□□ 1.17
TMEM53-202ENST00000372237 MRPS27Q92552 414 aaKnown RBP22.34■■□□□ 1.17
TMEM53-202ENST00000372237 BTG4Q9NY30 223 aa22.34■■□□□ 1.17
TMEM53-202ENST00000372237 RTEL1Q9NZ71 1219 aa22.34■■□□□ 1.17
TMEM53-202ENST00000372237 DHX16O60231 1041 aaKnown RBP22.34■■□□□ 1.17
TMEM53-202ENST00000372237 ADALQ6DHV7 355 aa22.34■■□□□ 1.17
TMEM53-202ENST00000372237 PAPPAQ13219 1627 aa22.34■■□□□ 1.17
TMEM53-202ENST00000372237 A0A087WWV3 80 aa22.33■■□□□ 1.17
TMEM53-202ENST00000372237 PRC1O43663 620 aa22.33■■□□□ 1.17
TMEM53-202ENST00000372237 C8orf76Q96K31 380 aa22.33■■□□□ 1.17
TMEM53-202ENST00000372237 KLF18A0A0U1RQI7 1052 aa22.32■■□□□ 1.16
TMEM53-202ENST00000372237 ZAP70P43403 619 aa22.32■■□□□ 1.16
TMEM53-202ENST00000372237 SCARF1Q14162 830 aa22.32■■□□□ 1.16
TMEM53-202ENST00000372237 OTUD7BQ6GQQ9 843 aa22.32■■□□□ 1.16
TMEM53-202ENST00000372237 CEP57L1Q8IYX8 460 aa22.32■■□□□ 1.16
TMEM53-202ENST00000372237 APPBP2Q92624 585 aa22.32■■□□□ 1.16
TMEM53-202ENST00000372237 GOLGA8BA8MQT2 603 aa22.32■■□□□ 1.16
TMEM53-202ENST00000372237 SF3A1Q15459 793 aaKnown RBP22.32■■□□□ 1.16
TMEM53-202ENST00000372237 HSP90AB3PQ58FF7 597 aa22.32■■□□□ 1.16
TMEM53-202ENST00000372237 RALYLQ86SE5 291 aaKnown RBP22.32■■□□□ 1.16
TMEM53-202ENST00000372237 LRRC8AQ8IWT6 810 aa22.32■■□□□ 1.16
TMEM53-202ENST00000372237 DHX40Q8IX18 779 aaKnown RBP22.32■■□□□ 1.16
TMEM53-202ENST00000372237 NCOA7Q8NI08 942 aa22.32■■□□□ 1.16
TMEM53-202ENST00000372237 ERCC4Q92889 916 aaPredicted RBP22.32■■□□□ 1.16
TMEM53-202ENST00000372237 FAM89AQ96GI7 184 aa22.32■■□□□ 1.16
TMEM53-202ENST00000372237 SDF4Q9BRK5 362 aa22.32■■□□□ 1.16
TMEM53-202ENST00000372237 PUS7LQ9H0K6 701 aaKnown RBP22.32■■□□□ 1.16
TMEM53-202ENST00000372237 POLR3DP05423 398 aaPredicted RBP22.31■■□□□ 1.16
TMEM53-202ENST00000372237 TNNT1P13805 278 aa22.31■■□□□ 1.16
TMEM53-202ENST00000372237 STK38Q15208 465 aa22.31■■□□□ 1.16
TMEM53-202ENST00000372237 MB21D2Q8IYB1 491 aaPredicted RBP22.31■■□□□ 1.16
TMEM53-202ENST00000372237 FMR1NBQ8N0W7 255 aaPredicted RBP22.31■■□□□ 1.16
TMEM53-202ENST00000372237 LINC00301Q8NCQ3 95 aa22.31■■□□□ 1.16
TMEM53-202ENST00000372237 A0A1B0GVL5 298 aa22.31■■□□□ 1.16
TMEM53-202ENST00000372237 CPLX1O14810 134 aa22.31■■□□□ 1.16
TMEM53-202ENST00000372237 IFIT5Q13325 482 aaKnown RBP22.31■■□□□ 1.16
TMEM53-202ENST00000372237 NAT10Q9H0A0 1025 aaKnown RBP22.31■■□□□ 1.16
TMEM53-202ENST00000372237 ORC3Q9UBD5 711 aaPredicted RBP22.31■■□□□ 1.16
TMEM53-202ENST00000372237 TNS2Q63HR2 1409 aa22.31■■□□□ 1.16
TMEM53-202ENST00000372237 A0A1W2PQ27 194 aa22.3■■□□□ 1.16
TMEM53-202ENST00000372237 A0A1W2PQ64 194 aa22.3■■□□□ 1.16
TMEM53-202ENST00000372237 A0A1W2PQD8 194 aa22.3■■□□□ 1.16
TMEM53-202ENST00000372237 ZNF213O14771 459 aa22.3■■□□□ 1.16
TMEM53-202ENST00000372237 CTIFO43310 598 aaKnown RBP22.3■■□□□ 1.16
TMEM53-202ENST00000372237 TPD52L1Q16890 204 aaPredicted RBP22.3■■□□□ 1.16
TMEM53-202ENST00000372237 NEMFO60524 1076 aa22.3■■□□□ 1.16
TMEM53-202ENST00000372237 PI16Q6UXB8 463 aa22.3■■□□□ 1.16
TMEM53-202ENST00000372237 FBXO18Q8NFZ0 1043 aa22.3■■□□□ 1.16
TMEM53-202ENST00000372237 KCNG4Q8TDN1 519 aa22.3■■□□□ 1.16
TMEM53-202ENST00000372237 FBXW7Q969H0 707 aa22.3■■□□□ 1.16
TMEM53-202ENST00000372237 CLIC4Q9Y696 253 aa22.3■■□□□ 1.16
TMEM53-202ENST00000372237 GPAA1O43292 621 aa22.29■■□□□ 1.16
TMEM53-202ENST00000372237 PCCAP05165 728 aaPredicted RBP22.29■■□□□ 1.16
TMEM53-202ENST00000372237 AOPEPQ8N6M6 819 aa22.29■■□□□ 1.16
TMEM53-202ENST00000372237 POLR3EQ9NVU0 708 aa22.29■■□□□ 1.16
TMEM53-202ENST00000372237 HPS5Q9UPZ3 1129 aa22.29■■□□□ 1.16
TMEM53-202ENST00000372237 NDUFA8P51970 172 aa22.29■■□□□ 1.16
TMEM53-202ENST00000372237 TRIM28Q13263 835 aaKnown RBP22.29■■□□□ 1.16
TMEM53-202ENST00000372237 KIF6Q6ZMV9 814 aa22.29■■□□□ 1.16
TMEM53-202ENST00000372237 RAB11FIP4Q86YS3 637 aa22.29■■□□□ 1.16
TMEM53-202ENST00000372237 ABCC12Q96J65 1359 aa22.28■■□□□ 1.16
TMEM53-202ENST00000372237 ANTXR2P58335 489 aa22.28■■□□□ 1.16
TMEM53-202ENST00000372237 ZRSR1Q15695 479 aaKnown RBP22.28■■□□□ 1.16
TMEM53-202ENST00000372237 BRAPQ7Z569 592 aa22.28■■□□□ 1.16
TMEM53-202ENST00000372237 PLA2G12BQ9BX93 195 aa22.28■■□□□ 1.16
TMEM53-202ENST00000372237 SMTNL1A8MU46 457 aa22.28■■□□□ 1.16
TMEM53-202ENST00000372237 YEATS4O95619 227 aa22.28■■□□□ 1.16
TMEM53-202ENST00000372237 ARID5BQ14865 1188 aa22.28■■□□□ 1.16
TMEM53-202ENST00000372237 MYSM1Q5VVJ2 828 aa22.28■■□□□ 1.16
TMEM53-202ENST00000372237 ZBTB38Q8NAP3 1195 aaPredicted RBP22.28■■□□□ 1.16
TMEM53-202ENST00000372237 ROBO1Q9Y6N7 1651 aa22.27■■□□□ 1.16
TMEM53-202ENST00000372237 MYH7P12883 1935 aa22.27■■□□□ 1.16
TMEM53-202ENST00000372237 SPTLC2O15270 562 aa22.27■■□□□ 1.16
TMEM53-202ENST00000372237 CSF1RP07333 972 aa22.27■■□□□ 1.16
TMEM53-202ENST00000372237 ATP2B3Q16720 1220 aa22.27■■□□□ 1.16
TMEM53-202ENST00000372237 SYNE3Q6ZMZ3 975 aa22.27■■□□□ 1.16
TMEM53-202ENST00000372237 FILIP1Q7Z7B0 1213 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms