RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 INTS4Q96HW7 963 aaKnown RBP15.5■□□□□ 0.07
LDB3-203ENST00000372056 ZSWIM6Q9HCJ5 1215 aa15.5■□□□□ 0.07
LDB3-203ENST00000372056 HELLSQ9NRZ9 838 aa15.5■□□□□ 0.07
LDB3-203ENST00000372056 NUCB2P80303 420 aa15.5■□□□□ 0.07
LDB3-203ENST00000372056 MSL1Q68DK7 614 aa15.5■□□□□ 0.07
LDB3-203ENST00000372056 NOL8Q76FK4 1167 aaKnown RBP15.5■□□□□ 0.07
LDB3-203ENST00000372056 FBXO33Q7Z6M2 555 aa15.5■□□□□ 0.07
LDB3-203ENST00000372056 JAKMIP1Q96N16 626 aaKnown RBP15.5■□□□□ 0.07
LDB3-203ENST00000372056 GGA1Q9UJY5 639 aa15.5■□□□□ 0.07
LDB3-203ENST00000372056 RPAP1Q9BWH6 1393 aaPredicted RBP15.49■□□□□ 0.07
LDB3-203ENST00000372056 CYP2E1P05181 493 aaPredicted RBP15.49■□□□□ 0.07
LDB3-203ENST00000372056 HIBADHP31937 336 aaKnown RBP15.49■□□□□ 0.07
LDB3-203ENST00000372056 AK2P54819 239 aa15.49■□□□□ 0.07
LDB3-203ENST00000372056 TGFB2P61812 414 aa15.49■□□□□ 0.07
LDB3-203ENST00000372056 FKBP4Q02790 459 aaKnown RBP eCLIP15.49■□□□□ 0.07
LDB3-203ENST00000372056 RNF20Q5VTR2 975 aa15.49■□□□□ 0.07
LDB3-203ENST00000372056 CLEC17AQ6ZS10 378 aa15.49■□□□□ 0.07
LDB3-203ENST00000372056 ZNF804AQ7Z570 1209 aa15.49■□□□□ 0.07
LDB3-203ENST00000372056 C2CD5Q86YS7 1000 aa15.49■□□□□ 0.07
LDB3-203ENST00000372056 ANKRD31Q8N7Z5 1873 aa15.49■□□□□ 0.07
LDB3-203ENST00000372056 SPATA5Q8NB90 893 aa15.49■□□□□ 0.07
LDB3-203ENST00000372056 SEC62Q99442 399 aaKnown RBP15.49■□□□□ 0.07
LDB3-203ENST00000372056 HMG20BQ9P0W2 317 aa15.49■□□□□ 0.07
LDB3-203ENST00000372056 A0A1B0GUL6 1792 aa15.48■□□□□ 0.07
LDB3-203ENST00000372056 DDX11L8A8MPP1 907 aa15.48■□□□□ 0.07
LDB3-203ENST00000372056 ZMYM1Q5SVZ6 1142 aa15.48■□□□□ 0.07
LDB3-203ENST00000372056 VPS53Q5VIR6 699 aa15.48■□□□□ 0.07
LDB3-203ENST00000372056 CCDC129Q6ZRS4 1044 aa15.48■□□□□ 0.07
LDB3-203ENST00000372056 GBP4Q96PP9 640 aa15.48■□□□□ 0.07
LDB3-203ENST00000372056 RNF113AO15541 343 aaKnown RBP15.48■□□□□ 0.07
LDB3-203ENST00000372056 MAP3K12Q12852 859 aa15.48■□□□□ 0.07
LDB3-203ENST00000372056 SCARF1Q14162 830 aa15.48■□□□□ 0.07
LDB3-203ENST00000372056 TSGA10IPQ3SY00 556 aa15.48■□□□□ 0.07
LDB3-203ENST00000372056 RUFY3Q7L099 469 aa15.48■□□□□ 0.07
LDB3-203ENST00000372056 EYA3Q99504 573 aa15.48■□□□□ 0.07
LDB3-203ENST00000372056 CYP46A1Q9Y6A2 500 aa15.48■□□□□ 0.07
LDB3-203ENST00000372056 C10orf71Q711Q0 1435 aa15.47■□□□□ 0.07
LDB3-203ENST00000372056 CPA1P15085 419 aa15.47■□□□□ 0.07
LDB3-203ENST00000372056 MCAMP43121 646 aa15.47■□□□□ 0.07
LDB3-203ENST00000372056 PHKA1P46020 1223 aa15.47■□□□□ 0.07
LDB3-203ENST00000372056 GSE1Q14687 1217 aa15.47■□□□□ 0.07
LDB3-203ENST00000372056 WASHC4Q2M389 1173 aa15.47■□□□□ 0.07
LDB3-203ENST00000372056 SOGA3Q5TF21 947 aa15.47■□□□□ 0.07
LDB3-203ENST00000372056 FAM84BQ96KN1 310 aaPredicted RBP15.47■□□□□ 0.07
LDB3-203ENST00000372056 NSFL1CQ9UNZ2 370 aaKnown RBP15.47■□□□□ 0.07
LDB3-203ENST00000372056 LIMCH1Q9UPQ0 1083 aa15.47■□□□□ 0.07
LDB3-203ENST00000372056 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
LDB3-203ENST00000372056 PSMA5P28066 241 aa15.46■□□□□ 0.07
LDB3-203ENST00000372056 PKP1Q13835 747 aa15.46■□□□□ 0.07
LDB3-203ENST00000372056 UBE3CQ15386 1083 aa15.46■□□□□ 0.07
LDB3-203ENST00000372056 SPTY2D1Q68D10 685 aaPredicted RBP15.46■□□□□ 0.07
LDB3-203ENST00000372056 SUPT20HQ8NEM7 779 aa15.46■□□□□ 0.07
LDB3-203ENST00000372056 PDRG1Q9NUG6 133 aa15.46■□□□□ 0.07
LDB3-203ENST00000372056 TAF6LQ9Y6J9 622 aa15.46■□□□□ 0.07
LDB3-203ENST00000372056 LRRC37AA6NMS7 1700 aa15.46■□□□□ 0.07
LDB3-203ENST00000372056 ZAP70P43403 619 aa15.46■□□□□ 0.06
LDB3-203ENST00000372056 SLFNL1Q499Z3 407 aa15.46■□□□□ 0.06
LDB3-203ENST00000372056 ZNF622Q969S3 477 aaKnown RBP eCLIP15.46■□□□□ 0.06
LDB3-203ENST00000372056 BCAMP50895 628 aa15.45■□□□□ 0.06
LDB3-203ENST00000372056 PI16Q6UXB8 463 aa15.45■□□□□ 0.06
LDB3-203ENST00000372056 MPNDQ8N594 471 aa15.45■□□□□ 0.06
LDB3-203ENST00000372056 WDR66Q8TBY9 1149 aa15.45■□□□□ 0.06
LDB3-203ENST00000372056 VPS33BQ9H267 617 aa15.45■□□□□ 0.06
LDB3-203ENST00000372056 MAST3O60307 1309 aa15.45■□□□□ 0.06
LDB3-203ENST00000372056 TAF1P21675 1872 aa15.44■□□□□ 0.06
LDB3-203ENST00000372056 APPBP2Q92624 585 aa15.44■□□□□ 0.06
LDB3-203ENST00000372056 DSCC1Q9BVC3 393 aa15.44■□□□□ 0.06
LDB3-203ENST00000372056 ZDHHC9Q9Y397 364 aa15.44■□□□□ 0.06
LDB3-203ENST00000372056 AKAP11Q9UKA4 1901 aa15.44■□□□□ 0.06
LDB3-203ENST00000372056 UFL1O94874 794 aa15.44■□□□□ 0.06
LDB3-203ENST00000372056 GPSM2P81274 684 aa15.44■□□□□ 0.06
LDB3-203ENST00000372056 RASGRF1Q13972 1273 aa15.44■□□□□ 0.06
LDB3-203ENST00000372056 KRT32Q14532 448 aa15.44■□□□□ 0.06
LDB3-203ENST00000372056 CD2APQ9Y5K6 639 aa15.44■□□□□ 0.06
LDB3-203ENST00000372056 DUOX1Q9NRD9 1551 aa15.44■□□□□ 0.06
LDB3-203ENST00000372056 SALL1Q9NSC2 1324 aa15.43■□□□□ 0.06
LDB3-203ENST00000372056 COL9A3Q14050 684 aaPredicted RBP15.43■□□□□ 0.06
LDB3-203ENST00000372056 BLOC1S2Q6QNY1 142 aa15.43■□□□□ 0.06
LDB3-203ENST00000372056 DPP8Q6V1X1 898 aaPredicted RBP15.43■□□□□ 0.06
LDB3-203ENST00000372056 CERS3Q8IU89 383 aa15.43■□□□□ 0.06
LDB3-203ENST00000372056 TTLL6Q8N841 843 aa15.43■□□□□ 0.06
LDB3-203ENST00000372056 TBC1D16Q8TBP0 767 aa15.43■□□□□ 0.06
LDB3-203ENST00000372056 TBC1D22AQ8WUA7 517 aa15.43■□□□□ 0.06
LDB3-203ENST00000372056 OSBP2Q969R2 916 aa15.43■□□□□ 0.06
LDB3-203ENST00000372056 ZC3H12CQ9C0D7 883 aaKnown RBP15.43■□□□□ 0.06
LDB3-203ENST00000372056 COA1Q9GZY4 146 aa15.43■□□□□ 0.06
LDB3-203ENST00000372056 KIF13BQ9NQT8 1826 aa15.43■□□□□ 0.06
LDB3-203ENST00000372056 M0R2C6 588 aa15.42■□□□□ 0.06
LDB3-203ENST00000372056 BAG4O95429 457 aaKnown RBP15.42■□□□□ 0.06
LDB3-203ENST00000372056 CYP21A2P08686 494 aa15.42■□□□□ 0.06
LDB3-203ENST00000372056 RPS6KB1P23443 525 aa15.42■□□□□ 0.06
LDB3-203ENST00000372056 GYG1P46976 350 aa15.42■□□□□ 0.06
LDB3-203ENST00000372056 RTKN2Q8IZC4 609 aa15.42■□□□□ 0.06
LDB3-203ENST00000372056 TDRD7Q8NHU6 1098 aaKnown RBP15.42■□□□□ 0.06
LDB3-203ENST00000372056 LARP6Q9BRS8 491 aaKnown RBP15.42■□□□□ 0.06
LDB3-203ENST00000372056 ALDH8A1Q9H2A2 487 aaPredicted RBP15.42■□□□□ 0.06
LDB3-203ENST00000372056 LRP2BPQ9P2M1 347 aa15.42■□□□□ 0.06
LDB3-203ENST00000372056 COL4A1P02462 1669 aa15.42■□□□□ 0.06
LDB3-203ENST00000372056 IRS2Q9Y4H2 1338 aa15.42■□□□□ 0.06
LDB3-203ENST00000372056 C6orf229H3BNL8 230 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms