RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 KIAA0232Q92628 1395 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 GIGYF1O75420 1035 aaPredicted RBP16.82■□□□□ 0.28
NDC1-201ENST00000371429 RRAGBQ5VZM2 374 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 CERS3Q8IU89 383 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 APPBP2Q92624 585 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 TMOD4Q9NZQ9 345 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 BCS1LQ9Y276 419 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 MROH5Q6ZUA9 1318 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 PPIP5K2O43314 1243 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 MMRN2Q9H8L6 949 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 ARHGEF10LQ9HCE6 1279 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 BIN2Q9UBW5 565 aaPredicted RBP16.82■□□□□ 0.28
NDC1-201ENST00000371429 MAGI2Q86UL8 1455 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 DNA2P51530 1060 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 ASIC1P78348 528 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 TAX1BP1Q86VP1 789 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 IL17REQ8NFR9 667 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 HOOK2Q96ED9 719 aa16.82■□□□□ 0.28
NDC1-201ENST00000371429 KRT2P35908 639 aa16.81■□□□□ 0.28
NDC1-201ENST00000371429 TARBP1Q13395 1621 aaKnown RBP16.81■□□□□ 0.28
NDC1-201ENST00000371429 MRPS27Q92552 414 aaKnown RBP16.81■□□□□ 0.28
NDC1-201ENST00000371429 USP25Q9UHP3 1055 aa16.81■□□□□ 0.28
NDC1-201ENST00000371429 INSRP06213 1382 aa16.81■□□□□ 0.28
NDC1-201ENST00000371429 N4BP3O15049 544 aa16.81■□□□□ 0.28
NDC1-201ENST00000371429 AK2P54819 239 aa16.81■□□□□ 0.28
NDC1-201ENST00000371429 AATFQ9NY61 560 aaKnown RBP eCLIP16.81■□□□□ 0.28
NDC1-201ENST00000371429 KIF4BQ2VIQ3 1234 aa16.81■□□□□ 0.28
NDC1-201ENST00000371429 KIF2AO00139 706 aaPredicted RBP16.8■□□□□ 0.28
NDC1-201ENST00000371429 TBC1D22AQ8WUA7 517 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 RBM28Q9NW13 759 aaKnown RBP16.8■□□□□ 0.28
NDC1-201ENST00000371429 B4E1Z4 1266 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 BACH1O14867 736 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 KCNQ3O43525 872 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 PHACTR2O75167 634 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 ZRSR2Q15696 482 aaKnown RBP16.8■□□□□ 0.28
NDC1-201ENST00000371429 GPR162Q16538 588 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 ZNF772Q68DY9 489 aaPredicted RBP16.8■□□□□ 0.28
NDC1-201ENST00000371429 CARD10Q9BWT7 1032 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 GPCPD1Q9NPB8 672 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 LOC102724428A0A0B4J2F2 783 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 CAVIN2O95810 425 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 KRT13P13646 458 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 SIK1P57059 783 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 SP4Q02446 784 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 NCBP1Q09161 790 aaKnown RBP16.8■□□□□ 0.28
NDC1-201ENST00000371429 PTPN14Q15678 1187 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 MTERF4Q7Z6M4 381 aaKnown RBP16.8■□□□□ 0.28
NDC1-201ENST00000371429 PTPDC1A2A3K4 754 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 CCDC129Q6ZRS4 1044 aa16.8■□□□□ 0.28
NDC1-201ENST00000371429 CTNNBL1Q8WYA6 563 aaPredicted RBP16.8■□□□□ 0.28
NDC1-201ENST00000371429 UGGT1Q9NYU2 1555 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 GPAA1O43292 621 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 PRDM1O75626 825 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 DLGAP5Q15398 846 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 MBD5Q9P267 1494 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 PRKG1Q13976 671 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 UBXN4Q92575 508 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 NEURL1BA8MQ27 555 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 TNNT1P13805 278 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 CTNNA2P26232 953 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 RXRBP28702 533 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 CA8P35219 290 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 RUFY3Q7L099 469 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 SPTLC2O15270 562 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 TMC6Q7Z403 805 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 SPAG5Q96R06 1193 aa16.79■□□□□ 0.28
NDC1-201ENST00000371429 ZYXQ15942 572 aaKnown RBP16.78■□□□□ 0.28
NDC1-201ENST00000371429 SPATA5Q8NB90 893 aa16.78■□□□□ 0.28
NDC1-201ENST00000371429 PSMA7O14818 248 aa16.78■□□□□ 0.28
NDC1-201ENST00000371429 ARHGEF25Q86VW2 580 aa16.78■□□□□ 0.28
NDC1-201ENST00000371429 NLGN1Q8N2Q7 840 aa16.78■□□□□ 0.28
NDC1-201ENST00000371429 ZBTB21Q9ULJ3 1066 aa16.78■□□□□ 0.28
NDC1-201ENST00000371429 ARHGEF5Q12774 1597 aa16.78■□□□□ 0.28
NDC1-201ENST00000371429 NLRP1Q9C000 1473 aa16.78■□□□□ 0.28
NDC1-201ENST00000371429 EIF3JO75822 258 aaKnown RBP16.78■□□□□ 0.28
NDC1-201ENST00000371429 FAM196AQ6ZSG2 479 aa16.78■□□□□ 0.28
NDC1-201ENST00000371429 CNPY2Q9Y2B0 182 aa16.78■□□□□ 0.28
NDC1-201ENST00000371429 H7C1D1 291 aa16.78■□□□□ 0.28
NDC1-201ENST00000371429 GBP2P32456 591 aaPredicted RBP16.78■□□□□ 0.28
NDC1-201ENST00000371429 MCM7P33993 719 aa16.78■□□□□ 0.28
NDC1-201ENST00000371429 FAM193AP78312 1265 aa16.78■□□□□ 0.28
NDC1-201ENST00000371429 TCP10Q12799 353 aa16.78■□□□□ 0.28
NDC1-201ENST00000371429 DHX58Q96C10 678 aa16.78■□□□□ 0.28
NDC1-201ENST00000371429 PNMA6EA0A0J9YXQ4 647 aa16.77■□□□□ 0.28
NDC1-201ENST00000371429 PAFAH1B1P43034 410 aa16.77■□□□□ 0.28
NDC1-201ENST00000371429 KBTBD3Q8NAB2 608 aa16.77■□□□□ 0.28
NDC1-201ENST00000371429 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.77■□□□□ 0.28
NDC1-201ENST00000371429 MLH3Q9UHC1 1453 aa16.77■□□□□ 0.28
NDC1-201ENST00000371429 ESPNB1AK53 854 aa16.77■□□□□ 0.28
NDC1-201ENST00000371429 F13A1P00488 732 aa16.77■□□□□ 0.28
NDC1-201ENST00000371429 CTSWP56202 376 aa16.77■□□□□ 0.28
NDC1-201ENST00000371429 TTLL7Q6ZT98 887 aa16.77■□□□□ 0.28
NDC1-201ENST00000371429 LUZP1Q86V48 1076 aa16.77■□□□□ 0.28
NDC1-201ENST00000371429 MYO5CQ9NQX4 1742 aa16.77■□□□□ 0.28
NDC1-201ENST00000371429 H0YHG0 523 aa16.77■□□□□ 0.27
NDC1-201ENST00000371429 TMEM87BQ96K49 555 aa16.77■□□□□ 0.27
NDC1-201ENST00000371429 IVNS1ABPQ9Y6Y0 642 aa16.77■□□□□ 0.27
NDC1-201ENST00000371429 ZNF335Q9H4Z2 1342 aaPredicted RBP16.77■□□□□ 0.27
NDC1-201ENST00000371429 GTF2IP78347 998 aa16.77■□□□□ 0.27
NDC1-201ENST00000371429 CCDC172P0C7W6 258 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms