RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 RIC3Q7Z5B4 369 aa12.65□□□□□ -0.38
TWNK-202ENST00000370228 TEX13AQ9BXU3 409 aaPredicted RBP12.65□□□□□ -0.38
TWNK-202ENST00000370228 POLR3GO15318 223 aaPredicted RBP12.65□□□□□ -0.39
TWNK-202ENST00000370228 CD2BP2O95400 341 aaKnown RBP12.65□□□□□ -0.39
TWNK-202ENST00000370228 SYNE4Q8N205 404 aa12.65□□□□□ -0.39
TWNK-202ENST00000370228 PRPF38AQ8NAV1 312 aaKnown RBP12.65□□□□□ -0.39
TWNK-202ENST00000370228 SLC24A3Q9HC58 644 aa12.65□□□□□ -0.39
TWNK-202ENST00000370228 PPP1R1BQ9UD71 204 aaPredicted RBP12.65□□□□□ -0.39
TWNK-202ENST00000370228 EXOC6BQ9Y2D4 811 aa12.65□□□□□ -0.39
TWNK-202ENST00000370228 NEBLO76041 1014 aa12.64□□□□□ -0.39
TWNK-202ENST00000370228 CYP2E1P05181 493 aaPredicted RBP12.64□□□□□ -0.39
TWNK-202ENST00000370228 KLHL23Q8NBE8 558 aa12.64□□□□□ -0.39
TWNK-202ENST00000370228 KDM4CQ9H3R0 1056 aa12.64□□□□□ -0.39
TWNK-202ENST00000370228 CCDC87Q9NVE4 849 aa12.64□□□□□ -0.39
TWNK-202ENST00000370228 DBF4Q9UBU7 674 aaPredicted RBP12.64□□□□□ -0.39
TWNK-202ENST00000370228 NSFL1CQ9UNZ2 370 aaKnown RBP12.64□□□□□ -0.39
TWNK-202ENST00000370228 WNK3Q9BYP7 1800 aa12.64□□□□□ -0.39
TWNK-202ENST00000370228 ANKRD18BA2A2Z9 1011 aa12.64□□□□□ -0.39
TWNK-202ENST00000370228 PNMA6AP0CW24 399 aaPredicted RBP12.64□□□□□ -0.39
TWNK-202ENST00000370228 ELF2Q15723 593 aa12.64□□□□□ -0.39
TWNK-202ENST00000370228 MRPL50Q8N5N7 158 aaKnown RBP12.64□□□□□ -0.39
TWNK-202ENST00000370228 TACO1Q9BSH4 297 aaKnown RBP12.64□□□□□ -0.39
TWNK-202ENST00000370228 ZSCAN16Q9H4T2 348 aaPredicted RBP12.64□□□□□ -0.39
TWNK-202ENST00000370228 MAP3K2Q9Y2U5 619 aa12.64□□□□□ -0.39
TWNK-202ENST00000370228 V9GYY5 206 aaPredicted RBP12.64□□□□□ -0.39
TWNK-202ENST00000370228 FAM163BP0C2L3 166 aa12.63□□□□□ -0.39
TWNK-202ENST00000370228 ERCC3P19447 782 aa12.63□□□□□ -0.39
TWNK-202ENST00000370228 C16orf45Q96MC5 204 aaPredicted RBP12.63□□□□□ -0.39
TWNK-202ENST00000370228 ZNF215Q9UL58 517 aaPredicted RBP12.63□□□□□ -0.39
TWNK-202ENST00000370228 ZBTB7AO95365 584 aa12.63□□□□□ -0.39
TWNK-202ENST00000370228 CAMKK2Q96RR4 588 aa12.63□□□□□ -0.39
TWNK-202ENST00000370228 BTAF1O14981 1849 aa12.63□□□□□ -0.39
TWNK-202ENST00000370228 CORO7P57737 925 aa12.63□□□□□ -0.39
TWNK-202ENST00000370228 USPL1Q5W0Q7 1092 aa12.63□□□□□ -0.39
TWNK-202ENST00000370228 AP1ARQ63HQ0 302 aa12.63□□□□□ -0.39
TWNK-202ENST00000370228 DZIP3Q86Y13 1208 aaKnown RBP12.63□□□□□ -0.39
TWNK-202ENST00000370228 ARHGEF1Q92888 912 aaKnown RBP12.63□□□□□ -0.39
TWNK-202ENST00000370228 TSPAN18Q96SJ8 248 aa12.63□□□□□ -0.39
TWNK-202ENST00000370228 PCNTO95613 3336 aa12.62□□□□□ -0.39
TWNK-202ENST00000370228 NPHP1O15259 732 aa12.62□□□□□ -0.39
TWNK-202ENST00000370228 H2AFXP16104 143 aaPredicted RBP12.62□□□□□ -0.39
TWNK-202ENST00000370228 MYD88Q99836 296 aa12.62□□□□□ -0.39
TWNK-202ENST00000370228 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.62□□□□□ -0.39
TWNK-202ENST00000370228 RTCBQ9Y3I0 505 aaKnown RBP12.62□□□□□ -0.39
TWNK-202ENST00000370228 APBB1O00213 710 aa12.62□□□□□ -0.39
TWNK-202ENST00000370228 POLD1P28340 1107 aa12.62□□□□□ -0.39
TWNK-202ENST00000370228 SETDB1Q15047 1291 aa12.62□□□□□ -0.39
TWNK-202ENST00000370228 SF3A1Q15459 793 aaKnown RBP12.62□□□□□ -0.39
TWNK-202ENST00000370228 DNAAF4Q8WXU2 420 aa12.62□□□□□ -0.39
TWNK-202ENST00000370228 THOC1Q96FV9 657 aaKnown RBP12.62□□□□□ -0.39
TWNK-202ENST00000370228 SMC3Q9UQE7 1217 aa12.62□□□□□ -0.39
TWNK-202ENST00000370228 RFC4P35249 363 aa12.61□□□□□ -0.39
TWNK-202ENST00000370228 TBC1D8BQ0IIM8 1120 aa12.61□□□□□ -0.39
TWNK-202ENST00000370228 DDX21Q9NR30 783 aaKnown RBP eCLIP12.61□□□□□ -0.39
TWNK-202ENST00000370228 ANAPC4Q9UJX5 808 aa12.61□□□□□ -0.39
TWNK-202ENST00000370228 KCPQ6ZWJ8 1503 aa12.61□□□□□ -0.39
TWNK-202ENST00000370228 IVLP07476 585 aa12.61□□□□□ -0.39
TWNK-202ENST00000370228 REXO1L1PQ8IX06 675 aa12.61□□□□□ -0.39
TWNK-202ENST00000370228 MKL1Q969V6 931 aa12.61□□□□□ -0.39
TWNK-202ENST00000370228 ERO1AQ96HE7 468 aa12.61□□□□□ -0.39
TWNK-202ENST00000370228 ATF5Q9Y2D1 282 aaPredicted RBP12.61□□□□□ -0.39
TWNK-202ENST00000370228 ZBTB7BO15156 539 aaPredicted RBP12.61□□□□□ -0.39
TWNK-202ENST00000370228 ST18O60284 1047 aa12.61□□□□□ -0.39
TWNK-202ENST00000370228 KINO60870 393 aaKnown RBP12.61□□□□□ -0.39
TWNK-202ENST00000370228 ACTN2P35609 894 aa12.61□□□□□ -0.39
TWNK-202ENST00000370228 TTLL5Q6EMB2 1281 aa12.61□□□□□ -0.39
TWNK-202ENST00000370228 ANKRD13DQ6ZTN6 518 aa12.61□□□□□ -0.39
TWNK-202ENST00000370228 CCDC97Q96F63 343 aaPredicted RBP12.61□□□□□ -0.39
TWNK-202ENST00000370228 MBD3O95983 291 aa12.6□□□□□ -0.39
TWNK-202ENST00000370228 NUTM1Q86Y26 1132 aa12.6□□□□□ -0.39
TWNK-202ENST00000370228 UBXN6Q9BZV1 441 aa12.6□□□□□ -0.39
TWNK-202ENST00000370228 PSD3Q9NYI0 1048 aa12.6□□□□□ -0.39
TWNK-202ENST00000370228 CCDC26Q8TAB7 109 aa12.6□□□□□ -0.39
TWNK-202ENST00000370228 SUDS3Q9H7L9 328 aaPredicted RBP12.6□□□□□ -0.39
TWNK-202ENST00000370228 NRDCO43847 1150 aa12.59□□□□□ -0.39
TWNK-202ENST00000370228 MNAT1P51948 309 aa12.59□□□□□ -0.39
TWNK-202ENST00000370228 TRAPPC3LQ5T215 181 aa12.59□□□□□ -0.39
TWNK-202ENST00000370228 RNF20Q5VTR2 975 aa12.59□□□□□ -0.39
TWNK-202ENST00000370228 CCDC186Q7Z3E2 898 aa12.59□□□□□ -0.39
TWNK-202ENST00000370228 TRIM74Q86UV6 250 aa12.59□□□□□ -0.39
TWNK-202ENST00000370228 TRIM73Q86UV7 250 aa12.59□□□□□ -0.39
TWNK-202ENST00000370228 FMNL3Q8IVF7 1028 aa12.59□□□□□ -0.39
TWNK-202ENST00000370228 STAG1Q8WVM7 1258 aa12.59□□□□□ -0.39
TWNK-202ENST00000370228 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.59□□□□□ -0.394e-7■■■■■ 57.7
TWNK-202ENST00000370228 PLSCR1O15162 318 aa12.59□□□□□ -0.39
TWNK-202ENST00000370228 INTS3Q68E01 1043 aaKnown RBP12.59□□□□□ -0.39
TWNK-202ENST00000370228 COL23A1Q86Y22 540 aaPredicted RBP12.59□□□□□ -0.39
TWNK-202ENST00000370228 API5Q9BZZ5 524 aaKnown RBP12.59□□□□□ -0.39
TWNK-202ENST00000370228 MYH14Q7Z406 1995 aaKnown RBP12.59□□□□□ -0.39
TWNK-202ENST00000370228 ZPR1O75312 459 aa12.59□□□□□ -0.39
TWNK-202ENST00000370228 SRRTQ9BXP5 876 aaKnown RBP12.59□□□□□ -0.39
TWNK-202ENST00000370228 MRC1P22897 1456 aa12.58□□□□□ -0.4
TWNK-202ENST00000370228 MYBL2P10244 700 aa12.58□□□□□ -0.4
TWNK-202ENST00000370228 GIMAP7Q8NHV1 300 aa12.58□□□□□ -0.4
TWNK-202ENST00000370228 FAM89AQ96GI7 184 aa12.58□□□□□ -0.4
TWNK-202ENST00000370228 SBF2Q86WG5 1849 aa12.58□□□□□ -0.4
TWNK-202ENST00000370228 TRAF1Q13077 416 aa12.58□□□□□ -0.4
TWNK-202ENST00000370228 WWC2Q6AWC2 1192 aa12.58□□□□□ -0.4
TWNK-202ENST00000370228 KIF6Q6ZMV9 814 aa12.58□□□□□ -0.4
TWNK-202ENST00000370228 EFCAB13Q8IY85 973 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms