RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 ZMYND15Q9H091 742 aa9.71□□□□□ -0.86
ABCA4-201ENST00000370225 RTL9Q8NET4 1388 aa9.71□□□□□ -0.86
ABCA4-201ENST00000370225 PLCG2P16885 1265 aa9.71□□□□□ -0.86
ABCA4-201ENST00000370225 HOXC9P31274 260 aa9.71□□□□□ -0.86
ABCA4-201ENST00000370225 ATP8B2P98198 1209 aa9.71□□□□□ -0.86
ABCA4-201ENST00000370225 CCDC129Q6ZRS4 1044 aa9.71□□□□□ -0.86
ABCA4-201ENST00000370225 LARGE2Q8N3Y3 721 aa9.71□□□□□ -0.86
ABCA4-201ENST00000370225 ZSCAN16Q9H4T2 348 aaPredicted RBP9.71□□□□□ -0.86
ABCA4-201ENST00000370225 RAPGEF6Q8TEU7 1601 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 PTPDC1A2A3K4 754 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 CCDC172P0C7W6 258 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 MCM3P25205 808 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 GNG11P61952 73 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 EYA1Q99502 592 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 ARMT1Q9H993 441 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 UBE2HP62256 183 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 PLCB3Q01970 1234 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 KRT79Q5XKE5 535 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 DCAF5Q96JK2 942 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 FAM170AA1A519 330 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 ATP2C2O75185 946 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 POLKQ9UBT6 870 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 A2MP01023 1474 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 H0YIN7 160 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 SORBS3O60504 671 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 KRT5P13647 590 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 USH1GQ495M9 461 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 APBB1IPQ7Z5R6 666 aaPredicted RBP9.7□□□□□ -0.86
ABCA4-201ENST00000370225 ZSCAN30Q86W11 494 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 AOPEPQ8N6M6 819 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 CCDC63Q8NA47 563 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 AATFQ9NY61 560 aaKnown RBP eCLIP9.7□□□□□ -0.86
ABCA4-201ENST00000370225 GNAT2P19087 354 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 DNM1Q05193 864 aaKnown RBP9.7□□□□□ -0.86
ABCA4-201ENST00000370225 TRAF1Q13077 416 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 KLHDC4Q8TBB5 520 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 BEGAINQ9BUH8 593 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 USP21Q9UK80 565 aa9.7□□□□□ -0.86
ABCA4-201ENST00000370225 ALDH1L1O75891 902 aa9.69□□□□□ -0.86
ABCA4-201ENST00000370225 PRIM1P49642 420 aaKnown RBP9.69□□□□□ -0.86
ABCA4-201ENST00000370225 LETM2Q2VYF4 491 aa9.69□□□□□ -0.86
ABCA4-201ENST00000370225 USP48Q86UV5 1035 aa9.69□□□□□ -0.86
ABCA4-201ENST00000370225 TICAM2Q86XR7 235 aa9.69□□□□□ -0.86
ABCA4-201ENST00000370225 KIF2AO00139 706 aaPredicted RBP9.69□□□□□ -0.86
ABCA4-201ENST00000370225 ZNF174Q15697 407 aa9.69□□□□□ -0.86
ABCA4-201ENST00000370225 GGA1Q9UJY5 639 aa9.69□□□□□ -0.86
ABCA4-201ENST00000370225 ASXL1Q8IXJ9 1541 aa9.69□□□□□ -0.86
ABCA4-201ENST00000370225 EIF4G3O43432 1585 aaKnown RBP9.69□□□□□ -0.86
ABCA4-201ENST00000370225 DPP8Q6V1X1 898 aaPredicted RBP9.69□□□□□ -0.86
ABCA4-201ENST00000370225 ORAI2Q96SN7 254 aa9.69□□□□□ -0.86
ABCA4-201ENST00000370225 SRRTQ9BXP5 876 aaKnown RBP9.69□□□□□ -0.86
ABCA4-201ENST00000370225 GSDMDP57764 484 aa9.69□□□□□ -0.86
ABCA4-201ENST00000370225 IFI16Q16666 785 aaKnown RBP9.69□□□□□ -0.86
ABCA4-201ENST00000370225 LRRC45Q96CN5 670 aa9.69□□□□□ -0.86
ABCA4-201ENST00000370225 GPHNQ9NQX3 736 aaPredicted RBP9.69□□□□□ -0.86
ABCA4-201ENST00000370225 CCDC169A6NNP5 214 aa9.69□□□□□ -0.86
ABCA4-201ENST00000370225 TIMM10P62072 90 aa9.69□□□□□ -0.86
ABCA4-201ENST00000370225 FLT4P35916 1363 aa9.69□□□□□ -0.86
ABCA4-201ENST00000370225 TRIM75PA6NK02 468 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 CCDC175P0C221 793 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 ZSCAN23Q3MJ62 389 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 CEP135Q66GS9 1140 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 EP400NLQ6ZTU2 488 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 TRERF1Q96PN7 1200 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 PSMA7O14818 248 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 CCNT1O60563 726 aaKnown RBP9.68□□□□□ -0.86
ABCA4-201ENST00000370225 HIBADHP31937 336 aaKnown RBP9.68□□□□□ -0.86
ABCA4-201ENST00000370225 KRT9P35527 623 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 RAPGEF1Q13905 1077 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 GPR162Q16538 588 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 CPXCR1Q8N123 301 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 KCNG4Q8TDN1 519 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 CAPZA3Q96KX2 299 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 IL16Q14005 1332 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 SMIM23A6NLE4 172 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 PHACTR3Q96KR7 559 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.68□□□□□ -0.86
ABCA4-201ENST00000370225 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.68□□□□□ -0.86
ABCA4-201ENST00000370225 RTL1A6NKG5 1358 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 UBXN1Q04323 297 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 DNAJC25Q9H1X3 360 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 PCDHB15Q9Y5E8 787 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 VWA3AA6NCI4 1184 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 B4E1Z4 1266 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 NOP56O00567 594 aaKnown RBP9.68□□□□□ -0.86
ABCA4-201ENST00000370225 CREB3L3Q68CJ9 461 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 HOMEZQ8IX15 550 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 DENND2AQ9ULE3 1009 aa9.68□□□□□ -0.86
ABCA4-201ENST00000370225 DTHD1Q6ZMT9 781 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 MRPS27Q92552 414 aaKnown RBP9.67□□□□□ -0.86
ABCA4-201ENST00000370225 A1BGP04217 495 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 SPOUT1Q5T280 376 aaKnown RBP9.67□□□□□ -0.86
ABCA4-201ENST00000370225 RNF34Q969K3 372 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 NDUFB9Q9Y6M9 179 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 NDC80O14777 642 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 PRDM1O75626 825 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 BIRC3Q13489 604 aa9.67□□□□□ -0.86
ABCA4-201ENST00000370225 IQCGQ9H095 443 aaKnown RBP9.67□□□□□ -0.86
ABCA4-201ENST00000370225 TTC12Q9H892 705 aaPredicted RBP9.67□□□□□ -0.86
ABCA4-201ENST00000370225 CPA1P15085 419 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms