RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 SLC4A4Q9Y6R1 1079 aa14.03□□□□□ -0.16
HCFC1-202ENST00000369984 FAM169AQ9Y6X4 670 aa14.03□□□□□ -0.16
HCFC1-202ENST00000369984 CDK13Q14004 1512 aaKnown RBP14.03□□□□□ -0.16
HCFC1-202ENST00000369984 F13A1P00488 732 aa14.03□□□□□ -0.16
HCFC1-202ENST00000369984 GTF3C6Q969F1 213 aa14.03□□□□□ -0.16
HCFC1-202ENST00000369984 IFT74Q96LB3 600 aa14.03□□□□□ -0.16
HCFC1-202ENST00000369984 UAP1Q16222 522 aaPredicted RBP14.03□□□□□ -0.16
HCFC1-202ENST00000369984 VIMP08670 466 aaKnown RBP14.03□□□□□ -0.16
HCFC1-202ENST00000369984 ZGPATQ8N5A5 531 aaKnown RBP14.02□□□□□ -0.16
HCFC1-202ENST00000369984 C6orf50Q9HD87 102 aa14.02□□□□□ -0.16
HCFC1-202ENST00000369984 SPDYE3A6NKU9 549 aa14.02□□□□□ -0.16
HCFC1-202ENST00000369984 XRCC6P12956 609 aaKnown RBP eCLIP14.02□□□□□ -0.167e-8■■□□□ 13.3
HCFC1-202ENST00000369984 MCM7P33993 719 aa14.02□□□□□ -0.16
HCFC1-202ENST00000369984 NCBP1Q09161 790 aaKnown RBP14.02□□□□□ -0.16
HCFC1-202ENST00000369984 DIXDC1Q155Q3 683 aa14.02□□□□□ -0.16
HCFC1-202ENST00000369984 IFNKQ9P0W0 207 aa14.02□□□□□ -0.16
HCFC1-202ENST00000369984 POGZQ7Z3K3 1410 aa14.02□□□□□ -0.16
HCFC1-202ENST00000369984 PI4KAP2A4QPH2 592 aa14.02□□□□□ -0.16
HCFC1-202ENST00000369984 SPTLC2O15270 562 aa14.02□□□□□ -0.16
HCFC1-202ENST00000369984 CRCPO75575 148 aa14.02□□□□□ -0.16
HCFC1-202ENST00000369984 HPDP32754 393 aaPredicted RBP14.02□□□□□ -0.16
HCFC1-202ENST00000369984 TNNC1P63316 161 aa14.02□□□□□ -0.16
HCFC1-202ENST00000369984 PI4KAP1Q8N8J0 262 aa14.02□□□□□ -0.16
HCFC1-202ENST00000369984 MSANTD4Q8NCY6 345 aa14.02□□□□□ -0.16
HCFC1-202ENST00000369984 VGLL3A8MV65 326 aa14.02□□□□□ -0.17
HCFC1-202ENST00000369984 SYT10Q6XYQ8 523 aa14.02□□□□□ -0.17
HCFC1-202ENST00000369984 CCDC65Q8IXS2 484 aa14.02□□□□□ -0.17
HCFC1-202ENST00000369984 VPS52Q8N1B4 723 aa14.02□□□□□ -0.17
HCFC1-202ENST00000369984 MTUS1Q9ULD2 1270 aa14.02□□□□□ -0.17
HCFC1-202ENST00000369984 CCDC152Q4G0S7 254 aa14.02□□□□□ -0.17
HCFC1-202ENST00000369984 RASSF4Q9H2L5 321 aa14.02□□□□□ -0.17
HCFC1-202ENST00000369984 RBM8AQ9Y5S9 174 aaKnown RBP14.02□□□□□ -0.17
HCFC1-202ENST00000369984 RNF168Q8IYW5 571 aaPredicted RBP14.02□□□□□ -0.17
HCFC1-202ENST00000369984 CCDC26Q8TAB7 109 aa14.02□□□□□ -0.17
HCFC1-202ENST00000369984 AGTPBP1Q9UPW5 1226 aa14.02□□□□□ -0.17
HCFC1-202ENST00000369984 UTP11Q9Y3A2 253 aaKnown RBP14.02□□□□□ -0.17
HCFC1-202ENST00000369984 TTC21BQ7Z4L5 1316 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 ST5P78524 1137 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 SEL1L2Q5TEA6 688 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 OGFRQ9NZT2 677 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 NME9Q86XW9 330 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 ARFGAP2Q8N6H7 521 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 GPR161Q8N6U8 529 aaKnown RBP14.01□□□□□ -0.17
HCFC1-202ENST00000369984 PPP1R12CQ9BZL4 782 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 NKIRAS1Q9NYS0 192 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 UQCRFS1P1P0C7P4 283 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 PPP2R3AQ06190 1150 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 AKNAD1Q5T1N1 836 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 ZMAT2Q96NC0 199 aaKnown RBP14.01□□□□□ -0.17
HCFC1-202ENST00000369984 BUB1BO60566 1050 aaPredicted RBP14.01□□□□□ -0.17
HCFC1-202ENST00000369984 AFAP1L1Q8TED9 768 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 CCT6BQ92526 530 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 TROQ12816 1431 aaPredicted RBP14.01□□□□□ -0.17
HCFC1-202ENST00000369984 A0A1B0GUA9 196 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 CYP7A1P22680 504 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 GNAQP50148 359 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 PRR16Q569H4 304 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 DCAF17Q5H9S7 520 aaPredicted RBP14.01□□□□□ -0.17
HCFC1-202ENST00000369984 CACNA2D3Q8IZS8 1091 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 PPFIBP2Q8ND30 876 aa14.01□□□□□ -0.17
HCFC1-202ENST00000369984 PCK1P35558 622 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 CALCOCO2Q13137 446 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 PLS1Q14651 629 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 ESYT1Q9BSJ8 1104 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 ERCC6LQ2NKX8 1250 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 FYB2Q5VWT5 728 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 DDX27Q96GQ7 796 aaKnown RBP14□□□□□ -0.17
HCFC1-202ENST00000369984 MBIPQ9NS73 344 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 FRMD4BQ9Y2L6 1034 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 VCX3BQ9H321 246 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 RTL9Q8NET4 1388 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14□□□□□ -0.17
HCFC1-202ENST00000369984 TRIM75PA6NK02 468 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 TUBBP07437 444 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 CALML3P27482 149 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 SMARCC2Q8TAQ2 1214 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 JARID2Q92833 1246 aaPredicted RBP14□□□□□ -0.17
HCFC1-202ENST00000369984 TCEANC2Q96MN5 208 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 PPANQ9NQ55 473 aaKnown RBP14□□□□□ -0.17
HCFC1-202ENST00000369984 C16orf71Q8IYS4 520 aaPredicted RBP14□□□□□ -0.17
HCFC1-202ENST00000369984 RRP36Q96EU6 259 aaKnown RBP14□□□□□ -0.17
HCFC1-202ENST00000369984 PFDN4Q9NQP4 134 aa14□□□□□ -0.17
HCFC1-202ENST00000369984 CEP128Q6ZU80 1094 aa13.99□□□□□ -0.17
HCFC1-202ENST00000369984 CNGA4Q8IV77 575 aa13.99□□□□□ -0.17
HCFC1-202ENST00000369984 BAG1Q99933 345 aaPredicted RBP13.99□□□□□ -0.17
HCFC1-202ENST00000369984 CCT6AP40227 531 aaKnown RBP13.99□□□□□ -0.17
HCFC1-202ENST00000369984 STX17P56962 302 aa13.99□□□□□ -0.17
HCFC1-202ENST00000369984 TRAF1Q13077 416 aa13.99□□□□□ -0.17
HCFC1-202ENST00000369984 INF2Q27J81 1249 aa13.99□□□□□ -0.17
HCFC1-202ENST00000369984 CCDC122Q5T0U0 273 aa13.99□□□□□ -0.17
HCFC1-202ENST00000369984 DTHD1Q6ZMT9 781 aa13.99□□□□□ -0.17
HCFC1-202ENST00000369984 TEX13AQ9BXU3 409 aaPredicted RBP13.99□□□□□ -0.17
HCFC1-202ENST00000369984 LUC7L2Q9Y383 392 aaKnown RBP13.99□□□□□ -0.17
HCFC1-202ENST00000369984 A0A1B0GUL7 405 aa13.99□□□□□ -0.17
HCFC1-202ENST00000369984 GKAP1Q5VSY0 366 aaPredicted RBP13.99□□□□□ -0.17
HCFC1-202ENST00000369984 ANKRD24Q8TF21 1146 aa13.99□□□□□ -0.17
HCFC1-202ENST00000369984 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.99□□□□□ -0.17
HCFC1-202ENST00000369984 KRT5P13647 590 aa13.99□□□□□ -0.17
HCFC1-202ENST00000369984 CLNS1AP54105 237 aaKnown RBP13.99□□□□□ -0.17
HCFC1-202ENST00000369984 HDAC1Q13547 482 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms