RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 MAP3K11Q16584 847 aa17.8■□□□□ 0.44
PHTF1-202ENST00000369598 LRRC24Q50LG9 513 aa17.8■□□□□ 0.44
PHTF1-202ENST00000369598 ZNF34Q8IZ26 560 aa17.8■□□□□ 0.44
PHTF1-202ENST00000369598 FAM200AQ8TCP9 573 aa17.8■□□□□ 0.44
PHTF1-202ENST00000369598 INTS4Q96HW7 963 aaKnown RBP17.8■□□□□ 0.44
PHTF1-202ENST00000369598 DBNLQ9UJU6 430 aaKnown RBP17.8■□□□□ 0.44
PHTF1-202ENST00000369598 CSF1RP07333 972 aa17.8■□□□□ 0.44
PHTF1-202ENST00000369598 PTF1AQ7RTS3 328 aa17.8■□□□□ 0.44
PHTF1-202ENST00000369598 TTC6Q86TZ1 520 aa17.8■□□□□ 0.44
PHTF1-202ENST00000369598 MORC2Q9Y6X9 1032 aaPredicted RBP17.8■□□□□ 0.44
PHTF1-202ENST00000369598 KCNQ4P56696 695 aa17.8■□□□□ 0.44
PHTF1-202ENST00000369598 RUFY2Q8WXA3 655 aa17.8■□□□□ 0.44
PHTF1-202ENST00000369598 NOL10Q9BSC4 688 aaKnown RBP17.8■□□□□ 0.44
PHTF1-202ENST00000369598 CIAO1O76071 339 aa17.79■□□□□ 0.44
PHTF1-202ENST00000369598 GYS2P54840 703 aa17.79■□□□□ 0.44
PHTF1-202ENST00000369598 PTPN14Q15678 1187 aa17.79■□□□□ 0.44
PHTF1-202ENST00000369598 PUS3Q9BZE2 481 aaKnown RBP17.79■□□□□ 0.44
PHTF1-202ENST00000369598 EPC1Q9H2F5 836 aa17.79■□□□□ 0.44
PHTF1-202ENST00000369598 ZNF165P49910 485 aa17.79■□□□□ 0.44
PHTF1-202ENST00000369598 BICD2Q8TD16 824 aa17.79■□□□□ 0.44
PHTF1-202ENST00000369598 DBNDD2Q9BQY9 259 aa17.79■□□□□ 0.44
PHTF1-202ENST00000369598 TRPC5Q9UL62 973 aaPredicted RBP17.79■□□□□ 0.44
PHTF1-202ENST00000369598 NUP98P52948 1817 aa17.78■□□□□ 0.44
PHTF1-202ENST00000369598 SGSM2O43147 1006 aa17.78■□□□□ 0.44
PHTF1-202ENST00000369598 DDX11Q96FC9 970 aa17.78■□□□□ 0.44
PHTF1-202ENST00000369598 CEP126Q9P2H0 1117 aa17.78■□□□□ 0.44
PHTF1-202ENST00000369598 ATP5JP18859 108 aa17.78■□□□□ 0.44
PHTF1-202ENST00000369598 TIMM10P62072 90 aa17.78■□□□□ 0.44
PHTF1-202ENST00000369598 TTLL11Q8NHH1 800 aa17.78■□□□□ 0.44
PHTF1-202ENST00000369598 UBN2Q6ZU65 1347 aa17.78■□□□□ 0.44
PHTF1-202ENST00000369598 CAMTA2O94983 1202 aa17.77■□□□□ 0.44
PHTF1-202ENST00000369598 SKILP12757 684 aa17.77■□□□□ 0.44
PHTF1-202ENST00000369598 GPR108Q9NPR9 543 aa17.77■□□□□ 0.44
PHTF1-202ENST00000369598 ZNF446Q9NWS9 450 aa17.77■□□□□ 0.44
PHTF1-202ENST00000369598 PDE8AO60658 829 aa17.77■□□□□ 0.44
PHTF1-202ENST00000369598 FAM177A1Q8N128 213 aaPredicted RBP17.77■□□□□ 0.44
PHTF1-202ENST00000369598 LINC00116Q8NCU8 138 aa17.77■□□□□ 0.44
PHTF1-202ENST00000369598 CTSWP56202 376 aa17.77■□□□□ 0.43
PHTF1-202ENST00000369598 SKIDA1Q1XH10 827 aa17.77■□□□□ 0.43
PHTF1-202ENST00000369598 ADCK5Q3MIX3 580 aa17.77■□□□□ 0.43
PHTF1-202ENST00000369598 C10orf67Q8IYJ2 551 aa17.77■□□□□ 0.43
PHTF1-202ENST00000369598 ZNF397Q8NF99 534 aaPredicted RBP17.77■□□□□ 0.43
PHTF1-202ENST00000369598 FBXO3Q9UK99 471 aa17.77■□□□□ 0.43
PHTF1-202ENST00000369598 HIP1O00291 1037 aa17.76■□□□□ 0.43
PHTF1-202ENST00000369598 ZNF75DP51815 510 aa17.76■□□□□ 0.43
PHTF1-202ENST00000369598 SUSD4Q5VX71 490 aa17.76■□□□□ 0.43
PHTF1-202ENST00000369598 CDC37L1Q7L3B6 337 aa17.76■□□□□ 0.43
PHTF1-202ENST00000369598 FSD1Q9BTV5 496 aa17.76■□□□□ 0.43
PHTF1-202ENST00000369598 TRIM66O15016 1216 aa17.76■□□□□ 0.43
PHTF1-202ENST00000369598 ITGA6P23229 1130 aa17.76■□□□□ 0.43
PHTF1-202ENST00000369598 PTPN21Q16825 1174 aa17.76■□□□□ 0.43
PHTF1-202ENST00000369598 LARP1BQ659C4 914 aaKnown RBP17.76■□□□□ 0.43
PHTF1-202ENST00000369598 JAKMIP1Q96N16 626 aaKnown RBP17.76■□□□□ 0.43
PHTF1-202ENST00000369598 SNX14Q9Y5W7 946 aa17.76■□□□□ 0.43
PHTF1-202ENST00000369598 MYH14Q7Z406 1995 aaKnown RBP17.75■□□□□ 0.43
PHTF1-202ENST00000369598 ANKRD18BA2A2Z9 1011 aa17.75■□□□□ 0.43
PHTF1-202ENST00000369598 EPB41L2O43491 1005 aaKnown RBP17.75■□□□□ 0.43
PHTF1-202ENST00000369598 SEPT12Q8IYM1 358 aa17.75■□□□□ 0.43
PHTF1-202ENST00000369598 DNAJC2Q99543 621 aaKnown RBP17.75■□□□□ 0.43
PHTF1-202ENST00000369598 UTP14AQ9BVJ6 771 aaKnown RBP17.75■□□□□ 0.43
PHTF1-202ENST00000369598 GREM2Q9H772 168 aa17.75■□□□□ 0.43
PHTF1-202ENST00000369598 QTRT2Q9H974 415 aaKnown RBP17.75■□□□□ 0.43
PHTF1-202ENST00000369598 MTMR6Q9Y217 621 aa17.75■□□□□ 0.43
PHTF1-202ENST00000369598 NIP7Q9Y221 180 aaKnown RBP eCLIP17.75■□□□□ 0.43
PHTF1-202ENST00000369598 ZNF652Q9Y2D9 606 aa17.75■□□□□ 0.43
PHTF1-202ENST00000369598 ONECUT3O60422 494 aaPredicted RBP17.74■□□□□ 0.43
PHTF1-202ENST00000369598 NR1I2O75469 434 aa17.74■□□□□ 0.43
PHTF1-202ENST00000369598 SEC31AO94979 1220 aaKnown RBP17.74■□□□□ 0.43
PHTF1-202ENST00000369598 PARP10Q53GL7 1025 aa17.74■□□□□ 0.43
PHTF1-202ENST00000369598 PRPF40BQ6NWY9 871 aaKnown RBP17.74■□□□□ 0.43
PHTF1-202ENST00000369598 LDHAL6AQ6ZMR3 332 aa17.74■□□□□ 0.43
PHTF1-202ENST00000369598 CALCOCO1Q9P1Z2 691 aa17.74■□□□□ 0.43
PHTF1-202ENST00000369598 LIMCH1Q9UPQ0 1083 aa17.74■□□□□ 0.43
PHTF1-202ENST00000369598 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.74■□□□□ 0.43
PHTF1-202ENST00000369598 SH3TC1Q8TE82 1336 aa17.74■□□□□ 0.43
PHTF1-202ENST00000369598 A0A1B0GUL7 405 aa17.74■□□□□ 0.43
PHTF1-202ENST00000369598 CCDC34Q96HJ3 373 aa17.74■□□□□ 0.43
PHTF1-202ENST00000369598 AKAP2Q9Y2D5 859 aa17.74■□□□□ 0.43
PHTF1-202ENST00000369598 ANKRD36CQ5JPF3 1778 aa17.74■□□□□ 0.43
PHTF1-202ENST00000369598 ANAPC15P60006 121 aa17.73■□□□□ 0.43
PHTF1-202ENST00000369598 RAD51AP2Q09MP3 1159 aa17.73■□□□□ 0.43
PHTF1-202ENST00000369598 EDC3Q96F86 508 aaKnown RBP17.73■□□□□ 0.43
PHTF1-202ENST00000369598 PAXBP1Q9Y5B6 917 aa17.73■□□□□ 0.43
PHTF1-202ENST00000369598 TPM3P06753 285 aa17.73■□□□□ 0.43
PHTF1-202ENST00000369598 ST5P78524 1137 aa17.73■□□□□ 0.43
PHTF1-202ENST00000369598 CNNM1Q9NRU3 951 aa17.73■□□□□ 0.43
PHTF1-202ENST00000369598 ATP6V1DQ9Y5K8 247 aa17.73■□□□□ 0.43
PHTF1-202ENST00000369598 GOLGA6L19H0YKK7 550 aa17.72■□□□□ 0.43
PHTF1-202ENST00000369598 AK7Q96M32 723 aa17.72■□□□□ 0.43
PHTF1-202ENST00000369598 TOMM22Q9NS69 142 aa17.72■□□□□ 0.43
PHTF1-202ENST00000369598 RSPH14Q9UHP6 348 aa17.72■□□□□ 0.43
PHTF1-202ENST00000369598 CCNL1Q9UK58 526 aaPredicted RBP17.72■□□□□ 0.43
PHTF1-202ENST00000369598 NDUFB9Q9Y6M9 179 aa17.72■□□□□ 0.43
PHTF1-202ENST00000369598 THSD7AQ9UPZ6 1657 aa17.72■□□□□ 0.43
PHTF1-202ENST00000369598 RAD50Q92878 1312 aa17.72■□□□□ 0.43
PHTF1-202ENST00000369598 SYT10Q6XYQ8 523 aa17.72■□□□□ 0.43
PHTF1-202ENST00000369598 HAUS7Q99871 368 aa17.72■□□□□ 0.43
PHTF1-202ENST00000369598 LSG1Q9H089 658 aaKnown RBP17.72■□□□□ 0.43
PHTF1-202ENST00000369598 ANKRD65E5RJM6 399 aa17.72■□□□□ 0.43
PHTF1-202ENST00000369598 NMIQ13287 307 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms