RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 SF3A1Q15459 793 aaKnown RBP13.49□□□□□ -0.25
RAB39B-201ENST00000369454 APPBP2Q92624 585 aa13.49□□□□□ -0.25
RAB39B-201ENST00000369454 AIFM3Q96NN9 605 aa13.49□□□□□ -0.25
RAB39B-201ENST00000369454 TOMM22Q9NS69 142 aa13.49□□□□□ -0.25
RAB39B-201ENST00000369454 RFX7Q2KHR2 1363 aa13.49□□□□□ -0.25
RAB39B-201ENST00000369454 MYL10Q9BUA6 226 aa13.48□□□□□ -0.25
RAB39B-201ENST00000369454 PIH1D3Q9NQM4 214 aaKnown RBP13.48□□□□□ -0.25
RAB39B-201ENST00000369454 ORC3Q9UBD5 711 aaPredicted RBP13.48□□□□□ -0.25
RAB39B-201ENST00000369454 CTNNA3Q9UI47 895 aa13.48□□□□□ -0.25
RAB39B-201ENST00000369454 RIPOR2Q9Y4F9 1068 aa13.48□□□□□ -0.25
RAB39B-201ENST00000369454 A0A1B0GVL5 298 aa13.48□□□□□ -0.25
RAB39B-201ENST00000369454 EXOC5O00471 708 aa13.48□□□□□ -0.25
RAB39B-201ENST00000369454 ADD1P35611 737 aaKnown RBP13.48□□□□□ -0.25
RAB39B-201ENST00000369454 LRMPQ12912 555 aa13.48□□□□□ -0.25
RAB39B-201ENST00000369454 CCDC73Q6ZRK6 1079 aa13.48□□□□□ -0.25
RAB39B-201ENST00000369454 FSIP1Q8NA03 581 aa13.48□□□□□ -0.25
RAB39B-201ENST00000369454 WWC3Q9ULE0 1092 aa13.48□□□□□ -0.25
RAB39B-201ENST00000369454 KIF3AQ9Y496 699 aa13.48□□□□□ -0.25
RAB39B-201ENST00000369454 LRRFIP1Q32MZ4 808 aaKnown RBP13.48□□□□□ -0.25
RAB39B-201ENST00000369454 C8orf76Q96K31 380 aa13.48□□□□□ -0.25
RAB39B-201ENST00000369454 KCNF1Q9H3M0 494 aa13.48□□□□□ -0.25
RAB39B-201ENST00000369454 CARMIL3Q8ND23 1372 aa13.48□□□□□ -0.25
RAB39B-201ENST00000369454 CSF1RP07333 972 aa13.47□□□□□ -0.25
RAB39B-201ENST00000369454 CYP19A1P11511 503 aaPredicted RBP13.47□□□□□ -0.25
RAB39B-201ENST00000369454 PDIA4P13667 645 aaKnown RBP13.47□□□□□ -0.25
RAB39B-201ENST00000369454 CCDC186Q7Z3E2 898 aa13.47□□□□□ -0.25
RAB39B-201ENST00000369454 MICU3Q86XE3 530 aa13.47□□□□□ -0.25
RAB39B-201ENST00000369454 LLPHQ9BRT6 129 aaKnown RBP13.47□□□□□ -0.25
RAB39B-201ENST00000369454 TEX13AQ9BXU3 409 aaPredicted RBP13.47□□□□□ -0.25
RAB39B-201ENST00000369454 SENP2Q9HC62 589 aa13.47□□□□□ -0.25
RAB39B-201ENST00000369454 SEC31BQ9NQW1 1179 aa13.47□□□□□ -0.25
RAB39B-201ENST00000369454 B4E1Z4 1266 aa13.47□□□□□ -0.25
RAB39B-201ENST00000369454 ANTXR2P58335 489 aa13.47□□□□□ -0.25
RAB39B-201ENST00000369454 TRDNQ13061 729 aa13.47□□□□□ -0.25
RAB39B-201ENST00000369454 CCDC102BQ68D86 513 aa13.47□□□□□ -0.25
RAB39B-201ENST00000369454 ILDR1Q86SU0 546 aaPredicted RBP13.47□□□□□ -0.25
RAB39B-201ENST00000369454 CCDC82Q8N4S0 544 aa13.47□□□□□ -0.25
RAB39B-201ENST00000369454 NCOA7Q8NI08 942 aa13.47□□□□□ -0.25
RAB39B-201ENST00000369454 ZNF532Q9HCE3 1301 aa13.47□□□□□ -0.25
RAB39B-201ENST00000369454 KINO60870 393 aaKnown RBP13.47□□□□□ -0.25
RAB39B-201ENST00000369454 RRP12Q5JTH9 1297 aaKnown RBP13.47□□□□□ -0.25
RAB39B-201ENST00000369454 C11orf57Q6ZUT1 292 aaPredicted RBP13.47□□□□□ -0.25
RAB39B-201ENST00000369454 PHKBQ93100 1093 aa13.47□□□□□ -0.25
RAB39B-201ENST00000369454 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.47□□□□□ -0.25
RAB39B-201ENST00000369454 ISM2Q6H9L7 571 aa13.46□□□□□ -0.25
RAB39B-201ENST00000369454 PIBF1Q8WXW3 757 aa13.46□□□□□ -0.25
RAB39B-201ENST00000369454 SDF4Q9BRK5 362 aa13.46□□□□□ -0.25
RAB39B-201ENST00000369454 CLIC4Q9Y696 253 aa13.46□□□□□ -0.25
RAB39B-201ENST00000369454 ZFYP08048 801 aaPredicted RBP13.46□□□□□ -0.25
RAB39B-201ENST00000369454 STK38Q15208 465 aa13.46□□□□□ -0.25
RAB39B-201ENST00000369454 NAA16Q6N069 864 aaPredicted RBP13.46□□□□□ -0.25
RAB39B-201ENST00000369454 ZNF274Q96GC6 653 aaPredicted RBP13.46□□□□□ -0.25
RAB39B-201ENST00000369454 UBN2Q6ZU65 1347 aa13.46□□□□□ -0.26
RAB39B-201ENST00000369454 UBE2Q2LH0YL09 131 aa13.46□□□□□ -0.26
RAB39B-201ENST00000369454 BIN1O00499 593 aa13.46□□□□□ -0.26
RAB39B-201ENST00000369454 KCNQ4P56696 695 aa13.46□□□□□ -0.26
RAB39B-201ENST00000369454 TRIM28Q13263 835 aaKnown RBP13.46□□□□□ -0.26
RAB39B-201ENST00000369454 NFXL1Q6ZNB6 911 aa13.46□□□□□ -0.26
RAB39B-201ENST00000369454 TBC1D10CQ8IV04 446 aa13.46□□□□□ -0.26
RAB39B-201ENST00000369454 GOLGA6L19H0YKK7 550 aa13.45□□□□□ -0.26
RAB39B-201ENST00000369454 PDE8BO95263 885 aa13.45□□□□□ -0.26
RAB39B-201ENST00000369454 AIDAQ96BJ3 306 aa13.45□□□□□ -0.26
RAB39B-201ENST00000369454 ZNF396Q96N95 335 aaPredicted RBP13.45□□□□□ -0.26
RAB39B-201ENST00000369454 LAMB4A4D0S4 1761 aa13.45□□□□□ -0.26
RAB39B-201ENST00000369454 BECN2A8MW95 431 aa13.45□□□□□ -0.26
RAB39B-201ENST00000369454 MARCKSP29966 332 aaPredicted RBP13.45□□□□□ -0.26
RAB39B-201ENST00000369454 SMIM5Q71RC9 77 aa13.45□□□□□ -0.26
RAB39B-201ENST00000369454 MPHOSPH8Q99549 860 aa13.45□□□□□ -0.26
RAB39B-201ENST00000369454 ZKSCAN3Q9BRR0 538 aa13.45□□□□□ -0.26
RAB39B-201ENST00000369454 AGXT2Q9BYV1 514 aa13.45□□□□□ -0.26
RAB39B-201ENST00000369454 TJP1Q07157 1748 aa13.45□□□□□ -0.26
RAB39B-201ENST00000369454 CTDSPL2Q05D32 466 aa13.44□□□□□ -0.26
RAB39B-201ENST00000369454 CYB5R4Q7L1T6 521 aa13.44□□□□□ -0.26
RAB39B-201ENST00000369454 MB21D2Q8IYB1 491 aaPredicted RBP13.44□□□□□ -0.26
RAB39B-201ENST00000369454 MAGEB6Q8N7X4 407 aa13.44□□□□□ -0.26
RAB39B-201ENST00000369454 PCDHA7Q9UN72 937 aa13.44□□□□□ -0.26
RAB39B-201ENST00000369454 HPS5Q9UPZ3 1129 aa13.44□□□□□ -0.26
RAB39B-201ENST00000369454 TNS2Q63HR2 1409 aa13.44□□□□□ -0.26
RAB39B-201ENST00000369454 NUTM2BA6NNL0 878 aaPredicted RBP13.44□□□□□ -0.26
RAB39B-201ENST00000369454 NUTM2EB1AL46 878 aaPredicted RBP13.44□□□□□ -0.26
RAB39B-201ENST00000369454 ADD2P35612 726 aa13.44□□□□□ -0.26
RAB39B-201ENST00000369454 GNL2Q13823 731 aaKnown RBP13.44□□□□□ -0.26
RAB39B-201ENST00000369454 NUTM2AQ8IVF1 878 aaPredicted RBP13.44□□□□□ -0.26
RAB39B-201ENST00000369454 RCOR1Q9UKL0 485 aa13.44□□□□□ -0.26
RAB39B-201ENST00000369454 PARP4Q9UKK3 1724 aaKnown RBP13.44□□□□□ -0.26
RAB39B-201ENST00000369454 GOLGA6L6A8MZA4 724 aa13.44□□□□□ -0.26
RAB39B-201ENST00000369454 PDE6AP16499 860 aa13.44□□□□□ -0.26
RAB39B-201ENST00000369454 MIGA1Q8NAN2 632 aa13.44□□□□□ -0.26
RAB39B-201ENST00000369454 ARMT1Q9H993 441 aa13.44□□□□□ -0.26
RAB39B-201ENST00000369454 RIC1Q4ADV7 1423 aa13.44□□□□□ -0.26
RAB39B-201ENST00000369454 KIF28PB7ZC32 967 aa13.43□□□□□ -0.26
RAB39B-201ENST00000369454 PDE8AO60658 829 aa13.43□□□□□ -0.26
RAB39B-201ENST00000369454 ATP6V1AP38606 617 aa13.43□□□□□ -0.26
RAB39B-201ENST00000369454 SUSD4Q5VX71 490 aa13.43□□□□□ -0.26
RAB39B-201ENST00000369454 NBPF3Q9H094 633 aa13.43□□□□□ -0.26
RAB39B-201ENST00000369454 SYNE3Q6ZMZ3 975 aa13.43□□□□□ -0.26
RAB39B-201ENST00000369454 VSIG10Q8N0Z9 540 aa13.43□□□□□ -0.26
RAB39B-201ENST00000369454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.43□□□□□ -0.26
RAB39B-201ENST00000369454 SALL1Q9NSC2 1324 aa13.43□□□□□ -0.26
RAB39B-201ENST00000369454 WTIPA6NIX2 430 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms