RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 APPP05067 770 aa14.24□□□□□ -0.13
PHGDH-201ENST00000369407 COPS6Q7L5N1 327 aa14.24□□□□□ -0.13
PHGDH-201ENST00000369407 NEDD4P46934 1319 aa14.24□□□□□ -0.13
PHGDH-201ENST00000369407 TNRQ92752 1358 aa14.24□□□□□ -0.13
PHGDH-201ENST00000369407 JCADQ9P266 1359 aa14.24□□□□□ -0.13
PHGDH-201ENST00000369407 N4BP2Q86UW6 1770 aaPredicted RBP14.24□□□□□ -0.13
PHGDH-201ENST00000369407 CHD2O14647 1828 aaKnown RBP14.24□□□□□ -0.13
PHGDH-201ENST00000369407 NEURL1BA8MQ27 555 aa14.24□□□□□ -0.13
PHGDH-201ENST00000369407 TIMM10P62072 90 aa14.24□□□□□ -0.13
PHGDH-201ENST00000369407 HSP90AB3PQ58FF7 597 aa14.24□□□□□ -0.13
PHGDH-201ENST00000369407 AKAP4Q5JQC9 854 aa14.24□□□□□ -0.13
PHGDH-201ENST00000369407 PIK3C2AO00443 1686 aa14.24□□□□□ -0.13
PHGDH-201ENST00000369407 DDX58O95786 925 aaKnown RBP14.24□□□□□ -0.13
PHGDH-201ENST00000369407 OAS2P29728 719 aaKnown RBP14.24□□□□□ -0.13
PHGDH-201ENST00000369407 UBASH3AP57075 661 aa14.24□□□□□ -0.13
PHGDH-201ENST00000369407 PTPN12Q05209 780 aaKnown RBP14.24□□□□□ -0.13
PHGDH-201ENST00000369407 GCKRQ14397 625 aa14.24□□□□□ -0.13
PHGDH-201ENST00000369407 STK11IPQ8N1F8 1099 aa14.24□□□□□ -0.13
PHGDH-201ENST00000369407 PDILTQ8N807 584 aa14.24□□□□□ -0.13
PHGDH-201ENST00000369407 RGPD8O14715 1765 aaPredicted RBP14.23□□□□□ -0.13
PHGDH-201ENST00000369407 KIF28PB7ZC32 967 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 SPTLC2O15270 562 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 RAD51AP2Q09MP3 1159 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 PDIA6Q15084 440 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 KRBA2Q6ZNG9 492 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 TOMM22Q9NS69 142 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 KCND1Q9NSA2 647 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 ARGLU1Q9NWB6 273 aaPredicted RBP14.23□□□□□ -0.13
PHGDH-201ENST00000369407 HDAC5Q9UQL6 1122 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 TOPAZ1Q8N9V7 1692 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 NRDCO43847 1150 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 TADA3O75528 432 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 PFKFB1P16118 471 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 NLRP12P59046 1061 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 EXOSC10Q01780 885 aaKnown RBP14.23□□□□□ -0.13
PHGDH-201ENST00000369407 C8orf76Q96K31 380 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 AIFM3Q96NN9 605 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 WDR24Q96S15 920 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 HSD3B7Q9H2F3 369 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 RTEL1Q9NZ71 1219 aa14.23□□□□□ -0.13
PHGDH-201ENST00000369407 NEXNQ0ZGT2 675 aa14.22□□□□□ -0.13
PHGDH-201ENST00000369407 PLEKHO1Q53GL0 409 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-201ENST00000369407 LMOD2Q6P5Q4 547 aa14.22□□□□□ -0.13
PHGDH-201ENST00000369407 RGS22Q8NE09 1264 aa14.22□□□□□ -0.13
PHGDH-201ENST00000369407 MROH7-TTC4A0A0A0MT08 1334 aa14.22□□□□□ -0.13
PHGDH-201ENST00000369407 WDHD1O75717 1129 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-201ENST00000369407 TPM4P67936 248 aa14.22□□□□□ -0.13
PHGDH-201ENST00000369407 PNOCQ13519 176 aa14.22□□□□□ -0.13
PHGDH-201ENST00000369407 REXO1L1PQ8IX06 675 aa14.22□□□□□ -0.13
PHGDH-201ENST00000369407 IP6K1Q92551 441 aa14.22□□□□□ -0.13
PHGDH-201ENST00000369407 PARP3Q9Y6F1 533 aa14.22□□□□□ -0.13
PHGDH-201ENST00000369407 GNG11P61952 73 aa14.22□□□□□ -0.13
PHGDH-201ENST00000369407 DDX21Q9NR30 783 aaKnown RBP eCLIP14.22□□□□□ -0.13
PHGDH-201ENST00000369407 SALL1Q9NSC2 1324 aa14.21□□□□□ -0.13
PHGDH-201ENST00000369407 HSPD1P10809 573 aaKnown RBP14.21□□□□□ -0.13
PHGDH-201ENST00000369407 HAUS7Q99871 368 aa14.21□□□□□ -0.13
PHGDH-201ENST00000369407 DESI2Q9BSY9 194 aa14.21□□□□□ -0.13
PHGDH-201ENST00000369407 PXDNQ92626 1479 aa14.21□□□□□ -0.14
PHGDH-201ENST00000369407 TULP2O00295 520 aa14.21□□□□□ -0.14
PHGDH-201ENST00000369407 TBC1D8O95759 1140 aa14.21□□□□□ -0.14
PHGDH-201ENST00000369407 RXRAP19793 462 aa14.21□□□□□ -0.14
PHGDH-201ENST00000369407 SYNE3Q6ZMZ3 975 aa14.21□□□□□ -0.14
PHGDH-201ENST00000369407 NFATC2IPQ8NCF5 419 aa14.21□□□□□ -0.14
PHGDH-201ENST00000369407 KARSQ15046 597 aaKnown RBP14.2□□□□□ -0.14
PHGDH-201ENST00000369407 KBTBD3Q8NAB2 608 aa14.2□□□□□ -0.14
PHGDH-201ENST00000369407 CLIC6Q96NY7 704 aa14.2□□□□□ -0.14
PHGDH-201ENST00000369407 IRX2Q9BZI1 471 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-201ENST00000369407 FANCLQ9NW38 375 aa14.2□□□□□ -0.14
PHGDH-201ENST00000369407 UTYO14607 1347 aa14.2□□□□□ -0.14
PHGDH-201ENST00000369407 VWA3AA6NCI4 1184 aa14.2□□□□□ -0.14
PHGDH-201ENST00000369407 RFX5P48382 616 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-201ENST00000369407 ADKP55263 362 aaKnown RBP14.2□□□□□ -0.14
PHGDH-201ENST00000369407 SMC1AQ14683 1233 aaKnown RBP14.2□□□□□ -0.14
PHGDH-201ENST00000369407 SPECC1Q5M775 1068 aa14.2□□□□□ -0.14
PHGDH-201ENST00000369407 MYSM1Q5VVJ2 828 aa14.2□□□□□ -0.14
PHGDH-201ENST00000369407 DIP2BQ9P265 1576 aa14.2□□□□□ -0.14
PHGDH-201ENST00000369407 LCMT1Q9UIC8 334 aa14.2□□□□□ -0.14
PHGDH-201ENST00000369407 HMGB1P09429 215 aaKnown RBP14.2□□□□□ -0.14
PHGDH-201ENST00000369407 TOP1P11387 765 aaKnown RBP14.2□□□□□ -0.14
PHGDH-201ENST00000369407 PAG1Q9NWQ8 432 aa14.2□□□□□ -0.14
PHGDH-201ENST00000369407 FEZ2Q9UHY8 353 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-201ENST00000369407 KLF18A0A0U1RQI7 1052 aa14.19□□□□□ -0.14
PHGDH-201ENST00000369407 A0A1W2PQ27 194 aa14.19□□□□□ -0.14
PHGDH-201ENST00000369407 A0A1W2PQ64 194 aa14.19□□□□□ -0.14
PHGDH-201ENST00000369407 A0A1W2PQD8 194 aa14.19□□□□□ -0.14
PHGDH-201ENST00000369407 GOLGA8BA8MQT2 603 aa14.19□□□□□ -0.14
PHGDH-201ENST00000369407 TRIM66O15016 1216 aa14.19□□□□□ -0.14
PHGDH-201ENST00000369407 CC2D1AQ6P1N0 951 aaPredicted RBP14.19□□□□□ -0.14
PHGDH-201ENST00000369407 TOGARAM2Q6ZUX3 1019 aa14.19□□□□□ -0.14
PHGDH-201ENST00000369407 PPP2R2CQ9Y2T4 447 aa14.19□□□□□ -0.14
PHGDH-201ENST00000369407 PHLPP2Q6ZVD8 1323 aa14.19□□□□□ -0.14
PHGDH-201ENST00000369407 M0R2C6 588 aa14.19□□□□□ -0.14
PHGDH-201ENST00000369407 FOXN1O15353 648 aa14.19□□□□□ -0.14
PHGDH-201ENST00000369407 LRRFIP1Q32MZ4 808 aaKnown RBP14.19□□□□□ -0.14
PHGDH-201ENST00000369407 KCNG4Q8TDN1 519 aa14.19□□□□□ -0.14
PHGDH-201ENST00000369407 COPRSQ9NQ92 184 aa14.19□□□□□ -0.14
PHGDH-201ENST00000369407 RSPH14Q9UHP6 348 aa14.19□□□□□ -0.14
PHGDH-201ENST00000369407 KCNA6P17658 529 aa14.18□□□□□ -0.14
PHGDH-201ENST00000369407 AXDND1Q5T1B0 1012 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-201ENST00000369407 ANO1Q5XXA6 986 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms