RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 MSL1Q68DK7 614 aa20.56■□□□□ 0.88
SNX27-202ENST00000368841 TTC21BQ7Z4L5 1316 aa20.56■□□□□ 0.88
SNX27-202ENST00000368841 ZEB2O60315 1214 aa20.56■□□□□ 0.88
SNX27-202ENST00000368841 MNAT1P51948 309 aa20.56■□□□□ 0.88
SNX27-202ENST00000368841 PPP2R5CQ13362 524 aa20.56■□□□□ 0.88
SNX27-202ENST00000368841 PPP1R7Q15435 360 aa20.56■□□□□ 0.88
SNX27-202ENST00000368841 ZNF569Q5MCW4 686 aa20.56■□□□□ 0.88
SNX27-202ENST00000368841 PARP3Q9Y6F1 533 aa20.56■□□□□ 0.88
SNX27-202ENST00000368841 PPP2R5DQ14738 602 aa20.55■□□□□ 0.88
SNX27-202ENST00000368841 CALCOCO1Q9P1Z2 691 aa20.55■□□□□ 0.88
SNX27-202ENST00000368841 CC2D2AQ9P2K1 1620 aa20.55■□□□□ 0.88
SNX27-202ENST00000368841 GINS2Q9Y248 185 aa20.55■□□□□ 0.88
SNX27-202ENST00000368841 CTAGE9A4FU28 777 aa20.55■□□□□ 0.88
SNX27-202ENST00000368841 HGSO14964 777 aaPredicted RBP20.55■□□□□ 0.88
SNX27-202ENST00000368841 IGSF3O75054 1194 aa20.55■□□□□ 0.88
SNX27-202ENST00000368841 MAPK8IP1Q9UQF2 711 aa20.55■□□□□ 0.88
SNX27-202ENST00000368841 VPS18Q9P253 973 aa20.55■□□□□ 0.88
SNX27-202ENST00000368841 ODF2LQ9ULJ1 636 aa20.55■□□□□ 0.88
SNX27-202ENST00000368841 BMP2KLQ5H9B9 411 aa20.55■□□□□ 0.88
SNX27-202ENST00000368841 PYM1Q9BRP8 204 aaKnown RBP20.55■□□□□ 0.88
SNX27-202ENST00000368841 PDE1AP54750 535 aa20.54■□□□□ 0.88
SNX27-202ENST00000368841 TPD52P55327 224 aaPredicted RBP20.54■□□□□ 0.88
SNX27-202ENST00000368841 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.54■□□□□ 0.88
SNX27-202ENST00000368841 UBLCP1Q8WVY7 318 aaPredicted RBP20.54■□□□□ 0.88
SNX27-202ENST00000368841 NEK11Q8NG66 645 aa20.54■□□□□ 0.88
SNX27-202ENST00000368841 MAK16Q9BXY0 300 aaKnown RBP20.54■□□□□ 0.88
SNX27-202ENST00000368841 CNNM2Q9H8M5 875 aa20.54■□□□□ 0.88
SNX27-202ENST00000368841 PSMA7O14818 248 aa20.54■□□□□ 0.88
SNX27-202ENST00000368841 CTAGE1Q96RT6 745 aa20.54■□□□□ 0.88
SNX27-202ENST00000368841 PLB1Q6P1J6 1458 aa20.54■□□□□ 0.88
SNX27-202ENST00000368841 VWA3AA6NCI4 1184 aa20.53■□□□□ 0.88
SNX27-202ENST00000368841 IRS4O14654 1257 aaPredicted RBP20.53■□□□□ 0.88
SNX27-202ENST00000368841 KCNG4Q8TDN1 519 aa20.53■□□□□ 0.88
SNX27-202ENST00000368841 BICC1Q9H694 974 aaKnown RBP20.53■□□□□ 0.88
SNX27-202ENST00000368841 NCAPD3P42695 1498 aa20.53■□□□□ 0.88
SNX27-202ENST00000368841 HSPA4P34932 840 aa20.53■□□□□ 0.88
SNX27-202ENST00000368841 EHBP1Q8NDI1 1231 aa20.53■□□□□ 0.88
SNX27-202ENST00000368841 LRRC45Q96CN5 670 aa20.53■□□□□ 0.88
SNX27-202ENST00000368841 LONRF3Q496Y0 759 aa20.53■□□□□ 0.88
SNX27-202ENST00000368841 TBC1D32Q96NH3 1257 aa20.53■□□□□ 0.88
SNX27-202ENST00000368841 CLSTN2Q9H4D0 955 aa20.53■□□□□ 0.88
SNX27-202ENST00000368841 RABEP2Q9H5N1 569 aa20.53■□□□□ 0.88
SNX27-202ENST00000368841 GOLGA6L9A6NEM1 432 aa20.53■□□□□ 0.88
SNX27-202ENST00000368841 ZGPATQ8N5A5 531 aaKnown RBP20.53■□□□□ 0.88
SNX27-202ENST00000368841 F13A1P00488 732 aa20.52■□□□□ 0.88
SNX27-202ENST00000368841 AK2P54819 239 aa20.52■□□□□ 0.88
SNX27-202ENST00000368841 ZWINTO95229 277 aa20.52■□□□□ 0.88
SNX27-202ENST00000368841 MAP7D1Q3KQU3 841 aa20.52■□□□□ 0.88
SNX27-202ENST00000368841 IFNKQ9P0W0 207 aa20.52■□□□□ 0.88
SNX27-202ENST00000368841 MAGI1Q96QZ7 1491 aaPredicted RBP20.52■□□□□ 0.88
SNX27-202ENST00000368841 LETM2Q2VYF4 491 aa20.52■□□□□ 0.88
SNX27-202ENST00000368841 FCHSD1Q86WN1 690 aa20.52■□□□□ 0.88
SNX27-202ENST00000368841 TACC1O75410 805 aa20.52■□□□□ 0.88
SNX27-202ENST00000368841 NCBP1Q09161 790 aaKnown RBP20.52■□□□□ 0.88
SNX27-202ENST00000368841 SPATA24Q86W54 205 aa20.52■□□□□ 0.88
SNX27-202ENST00000368841 PPIP5K1Q6PFW1 1433 aa20.52■□□□□ 0.88
SNX27-202ENST00000368841 RNF34Q969K3 372 aa20.52■□□□□ 0.87
SNX27-202ENST00000368841 TOPBP1Q92547 1522 aa20.51■□□□□ 0.87
SNX27-202ENST00000368841 DDB1Q16531 1140 aa20.51■□□□□ 0.87
SNX27-202ENST00000368841 AGTPBP1Q9UPW5 1226 aa20.51■□□□□ 0.87
SNX27-202ENST00000368841 PCDHB15Q9Y5E8 787 aa20.51■□□□□ 0.87
SNX27-202ENST00000368841 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.51■□□□□ 0.87
SNX27-202ENST00000368841 SPTLC2O15270 562 aa20.51■□□□□ 0.87
SNX27-202ENST00000368841 PPANQ9NQ55 473 aaKnown RBP20.51■□□□□ 0.87
SNX27-202ENST00000368841 KRT79Q5XKE5 535 aa20.51■□□□□ 0.87
SNX27-202ENST00000368841 TBC1D7Q9P0N9 293 aa20.51■□□□□ 0.87
SNX27-202ENST00000368841 MICALL1Q8N3F8 863 aa20.51■□□□□ 0.87
SNX27-202ENST00000368841 SEC62Q99442 399 aaKnown RBP20.51■□□□□ 0.87
SNX27-202ENST00000368841 ATP6V0A2Q9Y487 856 aa20.51■□□□□ 0.87
SNX27-202ENST00000368841 CCNT1O60563 726 aaKnown RBP20.51■□□□□ 0.87
SNX27-202ENST00000368841 NOLC1Q14978 699 aaKnown RBP eCLIP20.51■□□□□ 0.87
SNX27-202ENST00000368841 CCDC169A6NNP5 214 aa20.5■□□□□ 0.87
SNX27-202ENST00000368841 GEN1Q17RS7 908 aa20.5■□□□□ 0.87
SNX27-202ENST00000368841 SYT10Q6XYQ8 523 aa20.5■□□□□ 0.87
SNX27-202ENST00000368841 PAXBP1Q9Y5B6 917 aa20.5■□□□□ 0.87
SNX27-202ENST00000368841 NSRP1Q9H0G5 558 aaKnown RBP20.5■□□□□ 0.87
SNX27-202ENST00000368841 PLEKHA4Q9H4M7 779 aa20.5■□□□□ 0.87
SNX27-202ENST00000368841 CCDC171Q6TFL3 1326 aa20.5■□□□□ 0.87
SNX27-202ENST00000368841 ZC3H12CQ9C0D7 883 aaKnown RBP20.5■□□□□ 0.87
SNX27-202ENST00000368841 MRPL50Q8N5N7 158 aaKnown RBP20.5■□□□□ 0.87
SNX27-202ENST00000368841 FAM169AQ9Y6X4 670 aa20.5■□□□□ 0.87
SNX27-202ENST00000368841 PLVAPQ9BX97 442 aa20.5■□□□□ 0.87
SNX27-202ENST00000368841 TRIM75PA6NK02 468 aa20.49■□□□□ 0.87
SNX27-202ENST00000368841 LDHBP07195 334 aaKnown RBP20.49■□□□□ 0.87
SNX27-202ENST00000368841 PRIM1P49642 420 aaKnown RBP20.49■□□□□ 0.87
SNX27-202ENST00000368841 MTHFSDQ2M296 383 aaKnown RBP20.49■□□□□ 0.87
SNX27-202ENST00000368841 TXNDC16Q9P2K2 825 aa20.49■□□□□ 0.87
SNX27-202ENST00000368841 BIRC3Q13489 604 aa20.49■□□□□ 0.87
SNX27-202ENST00000368841 PTPDC1A2A3K4 754 aa20.49■□□□□ 0.87
SNX27-202ENST00000368841 MYCLP12524 364 aaPredicted RBP20.49■□□□□ 0.87
SNX27-202ENST00000368841 USP37Q86T82 979 aa20.49■□□□□ 0.87
SNX27-202ENST00000368841 A0A1B0GVL5 298 aa20.49■□□□□ 0.87
SNX27-202ENST00000368841 RNF113AO15541 343 aaKnown RBP20.49■□□□□ 0.87
SNX27-202ENST00000368841 CREB3L3Q68CJ9 461 aa20.49■□□□□ 0.87
SNX27-202ENST00000368841 RTCBQ9Y3I0 505 aaKnown RBP20.49■□□□□ 0.87
SNX27-202ENST00000368841 RAD51AP2Q09MP3 1159 aa20.48■□□□□ 0.87
SNX27-202ENST00000368841 CEP57Q86XR8 500 aa20.48■□□□□ 0.87
SNX27-202ENST00000368841 USH1GQ495M9 461 aa20.48■□□□□ 0.87
SNX27-202ENST00000368841 CCDC42Q96M95 316 aa20.48■□□□□ 0.87
SNX27-202ENST00000368841 MSH6P52701 1360 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms