RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 FKBP1BP68106 108 aa12.49□□□□□ -0.41
TPM3-210ENST00000368530 G2E3Q7L622 706 aa12.49□□□□□ -0.41
TPM3-210ENST00000368530 TMEM57Q8N5G2 664 aa12.49□□□□□ -0.41
TPM3-210ENST00000368530 PSME4Q14997 1843 aa12.49□□□□□ -0.41
TPM3-210ENST00000368530 CWF19L2Q2TBE0 894 aaKnown RBP12.48□□□□□ -0.41
TPM3-210ENST00000368530 PRAMEF18Q5VWM3 479 aa12.48□□□□□ -0.41
TPM3-210ENST00000368530 SKAP1Q86WV1 359 aa12.48□□□□□ -0.41
TPM3-210ENST00000368530 MED23Q9ULK4 1368 aa12.48□□□□□ -0.41
TPM3-210ENST00000368530 NEURL1BA8MQ27 555 aa12.47□□□□□ -0.41
TPM3-210ENST00000368530 WNT10BO00744 389 aa12.47□□□□□ -0.41
TPM3-210ENST00000368530 CCT4P50991 539 aaKnown RBP12.47□□□□□ -0.41
TPM3-210ENST00000368530 CASP7P55210 303 aa12.47□□□□□ -0.41
TPM3-210ENST00000368530 CENPQQ7L2Z9 268 aaPredicted RBP12.47□□□□□ -0.41
TPM3-210ENST00000368530 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
TPM3-210ENST00000368530 CDC5LQ99459 802 aaKnown RBP12.47□□□□□ -0.41
TPM3-210ENST00000368530 ZNF646O15015 1829 aaPredicted RBP12.47□□□□□ -0.41
TPM3-210ENST00000368530 UBE2Q2LH0YL09 131 aa12.47□□□□□ -0.41
TPM3-210ENST00000368530 STRIP1Q5VSL9 837 aa12.47□□□□□ -0.41
TPM3-210ENST00000368530 ZBED3Q96IU2 234 aaPredicted RBP12.47□□□□□ -0.41
TPM3-210ENST00000368530 IGHDP01880 384 aa12.46□□□□□ -0.42
TPM3-210ENST00000368530 CSF1RP07333 972 aa12.46□□□□□ -0.42
TPM3-210ENST00000368530 KLRK1P26718 216 aa12.46□□□□□ -0.42
TPM3-210ENST00000368530 PLA2G12BQ9BX93 195 aa12.46□□□□□ -0.42
TPM3-210ENST00000368530 CHMP4AQ9BY43 222 aa12.46□□□□□ -0.42
TPM3-210ENST00000368530 COA1Q9GZY4 146 aa12.46□□□□□ -0.42
TPM3-210ENST00000368530 PAPPA2Q9BXP8 1791 aa12.46□□□□□ -0.42
TPM3-210ENST00000368530 IRS2Q9Y4H2 1338 aa12.45□□□□□ -0.42
TPM3-210ENST00000368530 TM4SF4P48230 202 aa12.45□□□□□ -0.42
TPM3-210ENST00000368530 UBE3BQ7Z3V4 1068 aa12.45□□□□□ -0.42
TPM3-210ENST00000368530 CTU1Q7Z7A3 348 aaKnown RBP12.45□□□□□ -0.42
TPM3-210ENST00000368530 ARHGAP45Q92619 1136 aa12.45□□□□□ -0.42
TPM3-210ENST00000368530 API5Q9BZZ5 524 aaKnown RBP12.45□□□□□ -0.42
TPM3-210ENST00000368530 DDX19BQ9UMR2 479 aa12.45□□□□□ -0.42
TPM3-210ENST00000368530 LEMD3Q9Y2U8 911 aa12.45□□□□□ -0.42
TPM3-210ENST00000368530 PCDHB15Q9Y5E8 787 aa12.45□□□□□ -0.42
TPM3-210ENST00000368530 CACNA1FO60840 1977 aa12.44□□□□□ -0.42
TPM3-210ENST00000368530 GCKRQ14397 625 aa12.44□□□□□ -0.42
TPM3-210ENST00000368530 TBC1D8O95759 1140 aa12.43□□□□□ -0.42
TPM3-210ENST00000368530 ITGA6P23229 1130 aa12.43□□□□□ -0.42
TPM3-210ENST00000368530 SOX10P56693 466 aa12.43□□□□□ -0.42
TPM3-210ENST00000368530 NEXNQ0ZGT2 675 aa12.43□□□□□ -0.42
TPM3-210ENST00000368530 AAMPQ13685 434 aa12.43□□□□□ -0.42
TPM3-210ENST00000368530 LDLRAD1Q5T700 205 aa12.43□□□□□ -0.42
TPM3-210ENST00000368530 OGFOD1Q8N543 542 aa12.43□□□□□ -0.42
TPM3-210ENST00000368530 ZNF296Q8WUU4 475 aaPredicted RBP12.43□□□□□ -0.42
TPM3-210ENST00000368530 ZNF804BA4D1E1 1349 aa12.43□□□□□ -0.42
TPM3-210ENST00000368530 MYO3BQ8WXR4 1341 aa12.43□□□□□ -0.42
TPM3-210ENST00000368530 SNAP23O00161 211 aa12.42□□□□□ -0.42
TPM3-210ENST00000368530 SASH1O94885 1247 aa12.42□□□□□ -0.42
TPM3-210ENST00000368530 MMP14P50281 582 aa12.42□□□□□ -0.42
TPM3-210ENST00000368530 PTPN12Q05209 780 aaKnown RBP12.42□□□□□ -0.42
TPM3-210ENST00000368530 NOM1Q5C9Z4 860 aaKnown RBP12.42□□□□□ -0.42
TPM3-210ENST00000368530 TTLL5Q6EMB2 1281 aa12.42□□□□□ -0.42
TPM3-210ENST00000368530 STK31Q9BXU1 1019 aa12.42□□□□□ -0.42
TPM3-210ENST00000368530 R3HDMLQ9H3Y0 253 aa12.42□□□□□ -0.42
TPM3-210ENST00000368530 HPS5Q9UPZ3 1129 aa12.42□□□□□ -0.42
TPM3-210ENST00000368530 AKAP11Q9UKA4 1901 aa12.42□□□□□ -0.42
TPM3-210ENST00000368530 FLIIQ13045 1269 aa12.42□□□□□ -0.42
TPM3-210ENST00000368530 CERS5Q8N5B7 392 aa12.42□□□□□ -0.42
TPM3-210ENST00000368530 CFHR5Q9BXR6 569 aa12.42□□□□□ -0.42
TPM3-210ENST00000368530 ANKRD2Q9GZV1 360 aa12.42□□□□□ -0.42
TPM3-210ENST00000368530 IGHMBP2P38935 993 aaKnown RBP12.41□□□□□ -0.42
TPM3-210ENST00000368530 GTF2IP78347 998 aa12.41□□□□□ -0.42
TPM3-210ENST00000368530 CHRNDQ07001 517 aa12.41□□□□□ -0.42
TPM3-210ENST00000368530 C15orf52Q6ZUT6 534 aaKnown RBP12.41□□□□□ -0.42
TPM3-210ENST00000368530 KIAA0825Q8IV33 1275 aa12.41□□□□□ -0.42
TPM3-210ENST00000368530 CD209Q9NNX6 404 aa12.41□□□□□ -0.42
TPM3-210ENST00000368530 GPR25O00155 361 aa12.4□□□□□ -0.42
TPM3-210ENST00000368530 FOXO4P98177 505 aa12.4□□□□□ -0.42
TPM3-210ENST00000368530 PKN2Q16513 984 aaKnown RBP12.4□□□□□ -0.42
TPM3-210ENST00000368530 MTMR14Q8NCE2 650 aa12.4□□□□□ -0.42
TPM3-210ENST00000368530 LINS1Q8NG48 757 aa12.4□□□□□ -0.42
TPM3-210ENST00000368530 DNAAF4Q8WXU2 420 aa12.4□□□□□ -0.42
TPM3-210ENST00000368530 FBXW7Q969H0 707 aa12.4□□□□□ -0.42
TPM3-210ENST00000368530 RWDD1Q9H446 243 aaPredicted RBP12.4□□□□□ -0.42
TPM3-210ENST00000368530 C1orf115Q9H7X2 142 aa12.4□□□□□ -0.42
TPM3-210ENST00000368530 ZBTB40Q9NUA8 1239 aa12.4□□□□□ -0.42
TPM3-210ENST00000368530 FZD1Q9UP38 647 aa12.4□□□□□ -0.42
TPM3-210ENST00000368530 PCDHAC2Q9Y5I4 1007 aa12.4□□□□□ -0.42
TPM3-210ENST00000368530 PTPRCP08575 1304 aa12.4□□□□□ -0.42
TPM3-210ENST00000368530 MYH3P11055 1940 aa12.39□□□□□ -0.43
TPM3-210ENST00000368530 RGS3P49796 1198 aa12.39□□□□□ -0.43
TPM3-210ENST00000368530 MKRN3Q13064 507 aaKnown RBP12.39□□□□□ -0.43
TPM3-210ENST00000368530 TTLL12Q14166 644 aaPredicted RBP12.39□□□□□ -0.43
TPM3-210ENST00000368530 MAP3K11Q16584 847 aa12.39□□□□□ -0.43
TPM3-210ENST00000368530 SPRYD7Q5W111 196 aa12.39□□□□□ -0.43
TPM3-210ENST00000368530 APOBEC3FQ8IUX4 373 aaKnown RBP12.39□□□□□ -0.43
TPM3-210ENST00000368530 SPEF2Q9C093 1822 aa12.39□□□□□ -0.43
TPM3-210ENST00000368530 PDE4DIPQ5VU43 2346 aa12.38□□□□□ -0.43
TPM3-210ENST00000368530 F6X3S4 739 aa12.38□□□□□ -0.43
TPM3-210ENST00000368530 ZBTB7BO15156 539 aaPredicted RBP12.38□□□□□ -0.43
TPM3-210ENST00000368530 TAF5LO75529 589 aa12.38□□□□□ -0.43
TPM3-210ENST00000368530 NF2P35240 595 aa12.38□□□□□ -0.43
TPM3-210ENST00000368530 PRKG1Q13976 671 aa12.38□□□□□ -0.43
TPM3-210ENST00000368530 SLC4A10Q6U841 1118 aa12.38□□□□□ -0.43
TPM3-210ENST00000368530 HELBQ8NG08 1087 aaPredicted RBP12.38□□□□□ -0.43
TPM3-210ENST00000368530 MPHOSPH8Q99549 860 aa12.38□□□□□ -0.43
TPM3-210ENST00000368530 DEFB129Q9H1M3 183 aa12.38□□□□□ -0.43
TPM3-210ENST00000368530 RBM19Q9Y4C8 960 aaKnown RBP12.38□□□□□ -0.43
TPM3-210ENST00000368530 AOX1Q06278 1338 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms